| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is arcA [H]
Identifier: 170748888
GI number: 170748888
Start: 2630092
End: 2631060
Strand: Reverse
Name: arcA [H]
Synonym: Mrad2831_2470
Alternate gene names: 170748888
Gene position: 2631060-2630092 (Counterclockwise)
Preceding gene: 170748890
Following gene: 170748887
Centisome position: 43.29
GC content: 75.23
Gene sequence:
>969_bases ATGAGCGGCGAAGCCCAGCCGGACGCGGCGCGCAGCATCGCGCTGATCGGAGCGCCGATCGAGGTCGGCACCAGCGAGCC CGGCGCCCTCATGGGACCGGCGGCCCTGCGCACGGCCGGTCTCGTCCGGGCGCTCGCCGAACTCGGCCACGCGATCGCGG ATCGCGGCGACGTGGTCCCGGACGGACCTGCCGGGACGCGCGGGCTCGAGGGTGTCGCCGCCTGGACGCGGGCCGTGTCC AGGGCCGTGGGGGACGCCCTCGACGCGGGGGCGCTCCCGCTGACCGCCGGCGGCGATCACAGCCTGTCCCTGGGCTCCGT CGACGGGGTGATGCGGCACTCCGCGCGGCGCGGCCAGCCCGTCTTCGTGCTCTGGCTCGACGCCCACGCCGACTTCAACA CGCCGGCGACCTCCCCCTCCGGCAACGTCCACGGCATGCCGCTCGCCGCCCTGTGCGGGGAGCCGGGATTCCCGTCCCTG TTCGCCGAGCCGGCACCGGCGCCCCTGCCGCCCGCCCATGTCCACCTGTTCGGCCTCCGGTCGATCGACGCCGGCGAGCG CGCCCTCGTGACGGCGCGCCGGGTCGGCGTCACCGACATGCGCACGATCGACGAGTTCGGAGTCGTGGCGCCCCTGCGGC GGGTGCTCGACCGCGTCGCCGCGCAGGGGGCGCATCTCCATGTCAGCCTCGACATCGACTTCCTCGATCCGTCGATCGCC CCGGCCGTGGGCACCACCGTTCCGGGCGGCGCGACCTTCCGGGAGGCGCACCTGATCATGGAGATGCTCCACGATTCCGG GCTGGTCCGCTCCCTCGACGTGGTGGAACTCAACCCCTTCCTGGACGAGCGCGGCCGCAGCGCCCGGGTCTTGGTCGAGC TGGTGGCGAGCCTGTTCGGCCGGCGCATCCTCGACCGGCCGACCGGGCCGATCGAGGCCGTGGCCGCAGAGCCGGCCGGA CGCGCCTGA
Upstream 100 bases:
>100_bases GGCCGATCCGGTCTCGCGGTCACCGTCATCGGACGGTTATGAGTCCGGATGGTAGAGCGGCCGCGGAGCACCGGTGCTCC GGGACGGCGATGGAGGTGTG
Downstream 100 bases:
>100_bases TGCACGGCCCCCTCGCTCCCGCACCCTCGCCCGAGAGGCTCGGGGCCGCGCCCGCGCGCCAGCGCTCCGACGGGCGCATC CGGCTGCGCGTCGGGCCGGC
Product: arginase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MSGEAQPDAARSIALIGAPIEVGTSEPGALMGPAALRTAGLVRALAELGHAIADRGDVVPDGPAGTRGLEGVAAWTRAVS RAVGDALDAGALPLTAGGDHSLSLGSVDGVMRHSARRGQPVFVLWLDAHADFNTPATSPSGNVHGMPLAALCGEPGFPSL FAEPAPAPLPPAHVHLFGLRSIDAGERALVTARRVGVTDMRTIDEFGVVAPLRRVLDRVAAQGAHLHVSLDIDFLDPSIA PAVGTTVPGGATFREAHLIMEMLHDSGLVRSLDVVELNPFLDERGRSARVLVELVASLFGRRILDRPTGPIEAVAAEPAG RA
Sequences:
>Translated_322_residues MSGEAQPDAARSIALIGAPIEVGTSEPGALMGPAALRTAGLVRALAELGHAIADRGDVVPDGPAGTRGLEGVAAWTRAVS RAVGDALDAGALPLTAGGDHSLSLGSVDGVMRHSARRGQPVFVLWLDAHADFNTPATSPSGNVHGMPLAALCGEPGFPSL FAEPAPAPLPPAHVHLFGLRSIDAGERALVTARRVGVTDMRTIDEFGVVAPLRRVLDRVAAQGAHLHVSLDIDFLDPSIA PAVGTTVPGGATFREAHLIMEMLHDSGLVRSLDVVELNPFLDERGRSARVLVELVASLFGRRILDRPTGPIEAVAAEPAG RA >Mature_321_residues SGEAQPDAARSIALIGAPIEVGTSEPGALMGPAALRTAGLVRALAELGHAIADRGDVVPDGPAGTRGLEGVAAWTRAVSR AVGDALDAGALPLTAGGDHSLSLGSVDGVMRHSARRGQPVFVLWLDAHADFNTPATSPSGNVHGMPLAALCGEPGFPSLF AEPAPAPLPPAHVHLFGLRSIDAGERALVTARRVGVTDMRTIDEFGVVAPLRRVLDRVAAQGAHLHVSLDIDFLDPSIAP AVGTTVPGGATFREAHLIMEMLHDSGLVRSLDVVELNPFLDERGRSARVLVELVASLFGRRILDRPTGPIEAVAAEPAGR A
Specific function: Catalyzes The Formation Of Putrescine From Agmatine. [C]
COG id: COG0010
COG function: function code E; Arginase/agmatinase/formimionoglutamate hydrolase, arginase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the arginase family [H]
Homologues:
Organism=Homo sapiens, GI4502215, Length=310, Percent_Identity=36.1290322580645, Blast_Score=178, Evalue=7e-45, Organism=Homo sapiens, GI10947139, Length=308, Percent_Identity=33.4415584415584, Blast_Score=156, Evalue=2e-38, Organism=Caenorhabditis elegans, GI71996843, Length=239, Percent_Identity=28.4518828451883, Blast_Score=84, Evalue=9e-17, Organism=Saccharomyces cerevisiae, GI6325146, Length=299, Percent_Identity=32.1070234113712, Blast_Score=135, Evalue=7e-33, Organism=Drosophila melanogaster, GI24638886, Length=312, Percent_Identity=34.6153846153846, Blast_Score=145, Evalue=3e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014033 - InterPro: IPR006035 - InterPro: IPR020855 [H]
Pfam domain/function: PF00491 Arginase [H]
EC number: =3.5.3.1 [H]
Molecular weight: Translated: 33227; Mature: 33096
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: PS00626 RCC1_2 ; PS00148 ARGINASE_2 ; PS01053 ARGINASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGEAQPDAARSIALIGAPIEVGTSEPGALMGPAALRTAGLVRALAELGHAIADRGDVVP CCCCCCCHHHHEEEEEECCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC DGPAGTRGLEGVAAWTRAVSRAVGDALDAGALPLTAGGDHSLSLGSVDGVMRHSARRGQP CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEECCCHHHHHHHHHCCCCC VFVLWLDAHADFNTPATSPSGNVHGMPLAALCGEPGFPSLFAEPAPAPLPPAHVHLFGLR EEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHCCCCCCCCCCCEEEEEEEC SIDAGERALVTARRVGVTDMRTIDEFGVVAPLRRVLDRVAAQGAHLHVSLDIDFLDPSIA CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCC PAVGTTVPGGATFREAHLIMEMLHDSGLVRSLDVVELNPFLDERGRSARVLVELVASLFG CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECHHHHHCCCHHHHHHHHHHHHHH RRILDRPTGPIEAVAAEPAGRA HHHHCCCCCCHHEEECCCCCCC >Mature Secondary Structure SGEAQPDAARSIALIGAPIEVGTSEPGALMGPAALRTAGLVRALAELGHAIADRGDVVP CCCCCCHHHHEEEEEECCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC DGPAGTRGLEGVAAWTRAVSRAVGDALDAGALPLTAGGDHSLSLGSVDGVMRHSARRGQP CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEECCCHHHHHHHHHCCCCC VFVLWLDAHADFNTPATSPSGNVHGMPLAALCGEPGFPSLFAEPAPAPLPPAHVHLFGLR EEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHCCCCCCCCCCCEEEEEEEC SIDAGERALVTARRVGVTDMRTIDEFGVVAPLRRVLDRVAAQGAHLHVSLDIDFLDPSIA CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCC PAVGTTVPGGATFREAHLIMEMLHDSGLVRSLDVVELNPFLDERGRSARVLVELVASLFG CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECHHHHHCCCHHHHHHHHHHHHHH RRILDRPTGPIEAVAAEPAGRA HHHHCCCCCCHHEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2806247; 3040404; 11743193; 11743194 [H]