| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is exaA [H]
Identifier: 170748827
GI number: 170748827
Start: 2568007
End: 2569776
Strand: Reverse
Name: exaA [H]
Synonym: Mrad2831_2409
Alternate gene names: 170748827
Gene position: 2569776-2568007 (Counterclockwise)
Preceding gene: 170748828
Following gene: 170748826
Centisome position: 42.28
GC content: 67.51
Gene sequence:
>1770_bases ATGAGAATGCGGACCCGGTTCCTCGCCGCGGTGGGCGTCGCCGCCCTCGTGGCGGGCGGCGCCCTGCCGGCCATGGCCCA GGGGGTGACCGAGCAGGACATCATCAACGACGCCAAGACCCCCGGCGACGTCGTCACCTACGGGCTCGGGCCGCAGGCCC AGCGCTTCAGCCCGCTGAAGACCCTCAACCGCGACAACATCAAGGGCCTCGTCCCGGCGTGGTCGTTCTCGTTCGGCGGC GAGAAGCAGCGCGGCCAGGAGAGCCAGGCGCTGGTCAAGGACGGGATCATCTACGTCACGGGCTCGTACTCGCGCATGTA CGCGATCGATTCCCGCACCGGCGACAAGAAGTGGGAGTACGACGCCCGCCTGCCGGAAGGGATCCTGCCCTGCTGCGACG TGGTGAACCGCGGCGCCGCGCTCTACAAGGACAACGTCTACTTCGGCACGCTCGACGCCAAGCTGGTCGCGCTGAACACC AAGACCGGCAAGGTCGTCTGGCGCAAGGACATCGACGACTTCAAGGCCGGCTACAGCTACACGGCCGCCCCGATCATCGT GAAGGGCAAGATCATCACCGGCGTGTCGGGCGGCGAGTTCGGCGTGATCGGGCGGATCGAGGCCCGCGACGCCGAGACCG GCGAGATCGTGTGGAAGCGGCCCGTGATCGAGGGCCACATGGGCGAGCTCAACGGCAAGCCCTCGACCATGACGGGCAAG GTCAACGAGACCTGGCCCGGCGACATGTGGAAGTTCGGCGGCGGCGCCACGTGGCTCGGCGGCACCTACGACCCCGAGAC CAACCTCGTCTATTTCGGCACCGGCAACCCGGGCCCGTGGAACTCCTGGCTGCGGCCGGGCGACAACAAGTGGACGTCCT CGCGCCTCGCCCTCAACCCCGATAACGGCGAGATCGTCTGGGGCTTCCAGACCACCCCGCACGACGGCTGGGACTTCGAC GGCGTCAACGAGTTCGTGCCGTTCGACCTGAACAAGGGCGGCAAGACCATCAAGGCCGGCGCCACCGCCGACCGCAACGG CTTCTTCTACGTCCTCGACCGGACCAACGGGAAGTTCATCTCGGCGACGCCGTTCGTCGAGAAGATCAACTGGGCCAAGG GCATCGACGAGAACGGCCGCCCGATCTACAACGAGGAGAACCGGCCCGGCGACCCGAGCAAGGCGACCGGCGACGACAAG AAGGGCAAGTCGGTCTTCGCGGTGCCGAGCTTCCTCGGCGGCAAGAACTGGATGCCGATCGGCTACAGCCCCGACACCAA GCTGTTCTACGTGCCCTCCAACGAGTGGGGCATGGATATCTGGAACGAGCCGGTGAACTACAAGAAGGGCGCCGCCTATC TCGGCGCCGGCTTCACCATCAAGCCGGTCTTCGACGACCATATCGGCTCGCTCAAGGCGATCGACCCGACCTCCGGCAAG GTCGTGTGGGAGTACAAGAACAAGGCCCCGCTCTGGGCCGGCGTGCTGACCACCGCGGGCAACCTCGTCTTCACCGGCAC CCCGGAGGGCTTCCTGAAGGCCTTCGACGCCAAGACCGGCGAGGAGGTCTGGAAGTTCCAGGTCGGCACCGGCGTGGTCT CCTCGCCGATCACCTGGGAGCAGGACGGCGAGCAGTGGGTCGGCGTCGCGGCGGGCTGGGGCGGCGCGGTGCCGCTCTGG GGCGGCGAGGTCGCCAAGTCCACCGCCGGCATCAACCAGGGCGGCAGCTTCTGGGCGTTCAAGCTGCCGAAGACGGTGGC GTCGCGCTGA
Upstream 100 bases:
>100_bases AGCCTCGATCTCCAAGGGGGCGCCCCGCGACTCGTGCGGCCCGCGTCGAAACCCGGATGCCCCGGCCACACGGACCGGGG CCGACCACGGAGGACACGTC
Downstream 100 bases:
>100_bases AGGCCCTCAACCGAAAGCGTGCCGGCCCCCGCGGGCCGGCACGCCCAGGCTCCGGGGCAGGGCGGTCGTCTCAACACCCG CTTGCGCCCCGGGGCCGCAT
Product: methanol/ethanol family PQQ-dependent dehydrogenase
Products: NA
Alternate protein names: QEDH [H]
Number of amino acids: Translated: 589; Mature: 589
Protein sequence:
>589_residues MRMRTRFLAAVGVAALVAGGALPAMAQGVTEQDIINDAKTPGDVVTYGLGPQAQRFSPLKTLNRDNIKGLVPAWSFSFGG EKQRGQESQALVKDGIIYVTGSYSRMYAIDSRTGDKKWEYDARLPEGILPCCDVVNRGAALYKDNVYFGTLDAKLVALNT KTGKVVWRKDIDDFKAGYSYTAAPIIVKGKIITGVSGGEFGVIGRIEARDAETGEIVWKRPVIEGHMGELNGKPSTMTGK VNETWPGDMWKFGGGATWLGGTYDPETNLVYFGTGNPGPWNSWLRPGDNKWTSSRLALNPDNGEIVWGFQTTPHDGWDFD GVNEFVPFDLNKGGKTIKAGATADRNGFFYVLDRTNGKFISATPFVEKINWAKGIDENGRPIYNEENRPGDPSKATGDDK KGKSVFAVPSFLGGKNWMPIGYSPDTKLFYVPSNEWGMDIWNEPVNYKKGAAYLGAGFTIKPVFDDHIGSLKAIDPTSGK VVWEYKNKAPLWAGVLTTAGNLVFTGTPEGFLKAFDAKTGEEVWKFQVGTGVVSSPITWEQDGEQWVGVAAGWGGAVPLW GGEVAKSTAGINQGGSFWAFKLPKTVASR
Sequences:
>Translated_589_residues MRMRTRFLAAVGVAALVAGGALPAMAQGVTEQDIINDAKTPGDVVTYGLGPQAQRFSPLKTLNRDNIKGLVPAWSFSFGG EKQRGQESQALVKDGIIYVTGSYSRMYAIDSRTGDKKWEYDARLPEGILPCCDVVNRGAALYKDNVYFGTLDAKLVALNT KTGKVVWRKDIDDFKAGYSYTAAPIIVKGKIITGVSGGEFGVIGRIEARDAETGEIVWKRPVIEGHMGELNGKPSTMTGK VNETWPGDMWKFGGGATWLGGTYDPETNLVYFGTGNPGPWNSWLRPGDNKWTSSRLALNPDNGEIVWGFQTTPHDGWDFD GVNEFVPFDLNKGGKTIKAGATADRNGFFYVLDRTNGKFISATPFVEKINWAKGIDENGRPIYNEENRPGDPSKATGDDK KGKSVFAVPSFLGGKNWMPIGYSPDTKLFYVPSNEWGMDIWNEPVNYKKGAAYLGAGFTIKPVFDDHIGSLKAIDPTSGK VVWEYKNKAPLWAGVLTTAGNLVFTGTPEGFLKAFDAKTGEEVWKFQVGTGVVSSPITWEQDGEQWVGVAAGWGGAVPLW GGEVAKSTAGINQGGSFWAFKLPKTVASR >Mature_589_residues MRMRTRFLAAVGVAALVAGGALPAMAQGVTEQDIINDAKTPGDVVTYGLGPQAQRFSPLKTLNRDNIKGLVPAWSFSFGG EKQRGQESQALVKDGIIYVTGSYSRMYAIDSRTGDKKWEYDARLPEGILPCCDVVNRGAALYKDNVYFGTLDAKLVALNT KTGKVVWRKDIDDFKAGYSYTAAPIIVKGKIITGVSGGEFGVIGRIEARDAETGEIVWKRPVIEGHMGELNGKPSTMTGK VNETWPGDMWKFGGGATWLGGTYDPETNLVYFGTGNPGPWNSWLRPGDNKWTSSRLALNPDNGEIVWGFQTTPHDGWDFD GVNEFVPFDLNKGGKTIKAGATADRNGFFYVLDRTNGKFISATPFVEKINWAKGIDENGRPIYNEENRPGDPSKATGDDK KGKSVFAVPSFLGGKNWMPIGYSPDTKLFYVPSNEWGMDIWNEPVNYKKGAAYLGAGFTIKPVFDDHIGSLKAIDPTSGK VVWEYKNKAPLWAGVLTTAGNLVFTGTPEGFLKAFDAKTGEEVWKFQVGTGVVSSPITWEQDGEQWVGVAAGWGGAVPLW GGEVAKSTAGINQGGSFWAFKLPKTVASR
Specific function: Catalyzes the oxidation of primary alcohols except for methanol that is a very poor substrate [H]
COG id: COG4993
COG function: function code G; Glucose dehydrogenase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial PQQ dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1786316, Length=356, Percent_Identity=26.9662921348315, Blast_Score=123, Evalue=3e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019556 - InterPro: IPR019551 - InterPro: IPR018391 - InterPro: IPR017512 - InterPro: IPR002372 - InterPro: IPR011047 - InterPro: IPR001479 [H]
Pfam domain/function: PF01011 PQQ; PF10535 PQQ_C; PF10527 PQQ_N [H]
EC number: =1.1.2.8 [H]
Molecular weight: Translated: 63947; Mature: 63947
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: PS00364 BACTERIAL_PQQ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMRTRFLAAVGVAALVAGGALPAMAQGVTEQDIINDAKTPGDVVTYGLGPQAQRFSPLK CCCHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHCCCCCCCEEEECCCCCHHHCCHHH TLNRDNIKGLVPAWSFSFGGEKQRGQESQALVKDGIIYVTGSYSRMYAIDSRTGDKKWEY HCCCCCCCEEECEEEECCCCCHHCCCHHHHHHHCCEEEEECCCEEEEEEECCCCCCCEEE DARLPEGILPCCDVVNRGAALYKDNVYFGTLDAKLVALNTKTGKVVWRKDIDDFKAGYSY CCCCCCCCHHHHHHHHCCCEEEECCEEEEECCEEEEEEECCCCCEEEECCCHHHHCCCCE TAAPIIVKGKIITGVSGGEFGVIGRIEARDAETGEIVWKRPVIEGHMGELNGKPSTMTGK ECCEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCEEECC VNETWPGDMWKFGGGATWLGGTYDPETNLVYFGTGNPGPWNSWLRPGDNKWTSSRLALNP CCCCCCCCCEECCCCEEECCCCCCCCCCEEEEECCCCCCCHHCCCCCCCCCCCCEEEECC DNGEIVWGFQTTPHDGWDFDGVNEFVPFDLNKGGKTIKAGATADRNGFFYVLDRTNGKFI CCCEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCEEEECCCCCCCCEEEEEECCCCCEE SATPFVEKINWAKGIDENGRPIYNEENRPGDPSKATGDDKKGKSVFAVPSFLGGKNWMPI EECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHCCCCCCEEC GYSPDTKLFYVPSNEWGMDIWNEPVNYKKGAAYLGAGFTIKPVFDDHIGSLKAIDPTSGK CCCCCCEEEEEECCCCCCHHCCCCCCCCCCCEEEECCCEEEECCCCCCCCEEEECCCCCE VVWEYKNKAPLWAGVLTTAGNLVFTGTPEGFLKAFDAKTGEEVWKFQVGTGVVSSPITWE EEEEECCCCCEEEEHHHCCCCEEEECCCHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEC QDGEQWVGVAAGWGGAVPLWGGEVAKSTAGINQGGSFWAFKLPKTVASR CCCCEEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCEEEEECCHHHHCC >Mature Secondary Structure MRMRTRFLAAVGVAALVAGGALPAMAQGVTEQDIINDAKTPGDVVTYGLGPQAQRFSPLK CCCHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHCCCCCCCEEEECCCCCHHHCCHHH TLNRDNIKGLVPAWSFSFGGEKQRGQESQALVKDGIIYVTGSYSRMYAIDSRTGDKKWEY HCCCCCCCEEECEEEECCCCCHHCCCHHHHHHHCCEEEEECCCEEEEEEECCCCCCCEEE DARLPEGILPCCDVVNRGAALYKDNVYFGTLDAKLVALNTKTGKVVWRKDIDDFKAGYSY CCCCCCCCHHHHHHHHCCCEEEECCEEEEECCEEEEEEECCCCCEEEECCCHHHHCCCCE TAAPIIVKGKIITGVSGGEFGVIGRIEARDAETGEIVWKRPVIEGHMGELNGKPSTMTGK ECCEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCEEECC VNETWPGDMWKFGGGATWLGGTYDPETNLVYFGTGNPGPWNSWLRPGDNKWTSSRLALNP CCCCCCCCCEECCCCEEECCCCCCCCCCEEEEECCCCCCCHHCCCCCCCCCCCCEEEECC DNGEIVWGFQTTPHDGWDFDGVNEFVPFDLNKGGKTIKAGATADRNGFFYVLDRTNGKFI CCCEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCEEEECCCCCCCCEEEEEECCCCCEE SATPFVEKINWAKGIDENGRPIYNEENRPGDPSKATGDDKKGKSVFAVPSFLGGKNWMPI EECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHCCCCCCEEC GYSPDTKLFYVPSNEWGMDIWNEPVNYKKGAAYLGAGFTIKPVFDDHIGSLKAIDPTSGK CCCCCCEEEEEECCCCCCHHCCCCCCCCCCCEEEECCCEEEECCCCCCCCEEEECCCCCE VVWEYKNKAPLWAGVLTTAGNLVFTGTPEGFLKAFDAKTGEEVWKFQVGTGVVSSPITWE EEEEECCCCCEEEEHHHCCCCEEEECCCHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEC QDGEQWVGVAAGWGGAVPLWGGEVAKSTAGINQGGSFWAFKLPKTVASR CCCCEEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCEEEEECCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9826187; 10984043; 10075429; 10736230 [H]