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The map label for this gene is agmR [H]

Identifier: 170748826

GI number: 170748826

Start: 2567173

End: 2567832

Strand: Reverse

Name: agmR [H]

Synonym: Mrad2831_2408

Alternate gene names: 170748826

Gene position: 2567832-2567173 (Counterclockwise)

Preceding gene: 170748827

Following gene: 170748825

Centisome position: 42.25

GC content: 70.15

Gene sequence:

>660_bases
GTGCATCTCCTGATCGTCGACGACCACCCGCTGTTCCGCGACGCCCTGGCGGCCACGATCCGCCTCGCGCACCCGGACGC
GGTCCTGCACGAGGCCGACGGCATCGAGGCGGCCTGCGCGGTTCTGGCCGCCAACCGCGGCATCGACCTGACGCTCCTCG
ACCTCTCGATGCGGGGCGTGACCGGCTTCGACGGGCTGATCACCATCCGGGCCAGCTTCCCGCGCATCCCGATCCTGATC
GTCTCCGGCCACGAGGACCCGCGCATCGTCCGCGAGGCCCTGCAGCACGGGGCGGCGGGCTTCGTCCCCAAGGCCATGGA
CAAGGCGACGCTGACCCGGGCGATCACCGAGGTAATGAGCGGCGCCCTGTTCCTGCCGCCCGGGCTCGCCGAGGCCGGCG
CGCCCGCGCCCCGGAGCAAGAAGGCGCCGCTGCCGGAGCGCCTCGCCCGGCTGACGCCGCAGCAGTTGCGGGTCCTGATG
ATGATCCGGCAGGGCAAGCTCAACAAGCAGATCGCCCACGAGCTCCAGGTCGGCGATTCGACCGTGAAGGCGCACGTCTC
CGAGATCCTGCGCAAGCTCGAGGTCATCAGCCGCACGCAGATCGTGATCGACACGGCGTCCCTCGATTTCGATCAGATCC
ACAACAGCCACTCGGCCTGA

Upstream 100 bases:

>100_bases
CACCCGCTTGCGCCCCGGGGCCGCATCGATCACCTTCGGCCCTCCCGCCCGCGGTTTCGGCAGATCCTGTGAGGATCTCG
AGCGAAGGACCGAGGTCTCC

Downstream 100 bases:

>100_bases
CGGCGCGGCTGCGGGACCGGGAAGCTCCTGACCGGCGGCCCCACGCTCCACCCCATCTTGAGGTGCCGGAGCGCAGCGGA
GGCCCCGCAGGAGAGCTCCA

Product: two component LuxR family transcriptional regulator

Products: NA

Alternate protein names: Protein AgmR [H]

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MHLLIVDDHPLFRDALAATIRLAHPDAVLHEADGIEAACAVLAANRGIDLTLLDLSMRGVTGFDGLITIRASFPRIPILI
VSGHEDPRIVREALQHGAAGFVPKAMDKATLTRAITEVMSGALFLPPGLAEAGAPAPRSKKAPLPERLARLTPQQLRVLM
MIRQGKLNKQIAHELQVGDSTVKAHVSEILRKLEVISRTQIVIDTASLDFDQIHNSHSA

Sequences:

>Translated_219_residues
MHLLIVDDHPLFRDALAATIRLAHPDAVLHEADGIEAACAVLAANRGIDLTLLDLSMRGVTGFDGLITIRASFPRIPILI
VSGHEDPRIVREALQHGAAGFVPKAMDKATLTRAITEVMSGALFLPPGLAEAGAPAPRSKKAPLPERLARLTPQQLRVLM
MIRQGKLNKQIAHELQVGDSTVKAHVSEILRKLEVISRTQIVIDTASLDFDQIHNSHSA
>Mature_219_residues
MHLLIVDDHPLFRDALAATIRLAHPDAVLHEADGIEAACAVLAANRGIDLTLLDLSMRGVTGFDGLITIRASFPRIPILI
VSGHEDPRIVREALQHGAAGFVPKAMDKATLTRAITEVMSGALFLPPGLAEAGAPAPRSKKAPLPERLARLTPQQLRVLM
MIRQGKLNKQIAHELQVGDSTVKAHVSEILRKLEVISRTQIVIDTASLDFDQIHNSHSA

Specific function: Positive activator for glycerol metabolism [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788521, Length=204, Percent_Identity=32.843137254902, Blast_Score=84, Evalue=6e-18,
Organism=Escherichia coli, GI1787473, Length=203, Percent_Identity=33.4975369458128, Blast_Score=81, Evalue=5e-17,
Organism=Escherichia coli, GI1786747, Length=206, Percent_Identity=26.6990291262136, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1788222, Length=198, Percent_Identity=25.7575757575758, Blast_Score=75, Evalue=2e-15,
Organism=Escherichia coli, GI1788712, Length=198, Percent_Identity=28.2828282828283, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI1789937, Length=151, Percent_Identity=27.8145695364238, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1790102, Length=200, Percent_Identity=27.5, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 23686; Mature: 23686

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLLIVDDHPLFRDALAATIRLAHPDAVLHEADGIEAACAVLAANRGIDLTLLDLSMRGV
CEEEEECCCCHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHCCCCEEEEEEEEECCC
TGFDGLITIRASFPRIPILIVSGHEDPRIVREALQHGAAGFVPKAMDKATLTRAITEVMS
CCCCCEEEEEECCCCCEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHC
GALFLPPGLAEAGAPAPRSKKAPLPERLARLTPQQLRVLMMIRQGKLNKQIAHELQVGDS
CCEECCCCCHHCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHCCCH
TVKAHVSEILRKLEVISRTQIVIDTASLDFDQIHNSHSA
HHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHCCCCC
>Mature Secondary Structure
MHLLIVDDHPLFRDALAATIRLAHPDAVLHEADGIEAACAVLAANRGIDLTLLDLSMRGV
CEEEEECCCCHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHCCCCEEEEEEEEECCC
TGFDGLITIRASFPRIPILIVSGHEDPRIVREALQHGAAGFVPKAMDKATLTRAITEVMS
CCCCCEEEEEECCCCCEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHC
GALFLPPGLAEAGAPAPRSKKAPLPERLARLTPQQLRVLMMIRQGKLNKQIAHELQVGDS
CCEECCCCCHHCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHCCCH
TVKAHVSEILRKLEVISRTQIVIDTASLDFDQIHNSHSA
HHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1938886; 10984043 [H]