| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is rmlA [H]
Identifier: 170748795
GI number: 170748795
Start: 2519785
End: 2520684
Strand: Reverse
Name: rmlA [H]
Synonym: Mrad2831_2377
Alternate gene names: 170748795
Gene position: 2520684-2519785 (Counterclockwise)
Preceding gene: 170748796
Following gene: 170748793
Centisome position: 41.47
GC content: 68.0
Gene sequence:
>900_bases ATGAAGGGCATCGTCCTGGCCGGCGGATCCGGCACGCGCCTGCACCCGGCCACGCTGTCGATCAACAAGCAGCTCCTGCC GGTCTACGACAAGCCGATGATCTACTACCCGGTCTCGGTGCTGATGCTCGCCGGCATCCGCGAGATCCTGATCATCTCGT CGCCGGAGCACCTCGACAACTACAAGCGCCTGTTCGGCACCGGCGAGCAGTTCGGCCTCAAGTTCTCCTACGCCCTGCAG CCGCGGCCGGAGGGCCTCGCCCAGGCCTTCGTGATCGGGCGCGACTTCGTGGGCGACGACGACGTGGCGCTGATCCTCGG CGACAACCTGTTCTTCGGCGCCGGCATGGGCGAGCTCCTGGAGCGCGCGTCGAGCCGGAAGCAGGGCGCGACGGTCTTCG CCTACCACGTCGACAACCCGCAGGCCTACGGCGTCGTCAACCTCGACAAGTCGGGGCGGCCGACGAAGATCGTCGAGAAG CCGCAGAACCCGGAATCGACCTGGGCGGTGACCGGCCTGTACTTCTACGACAACCAGGTGCTCGACATCGCCGCCGACGT GAAGCCCTCGGCCCGCGGCGAGCTGGAGATCACCAGCGTCAACGAGGCCTACCTGCAGCACGGCCAGCTGCACGTGGAGC GCATGTCGCGCGGCTACGCGTGGCTCGACACCGGGACCCACGACAGCCTGCTCGAGGCGAGCGAGTTCGTCCGCACGCTG CAGAACCGGCAGGGCCTCCAGGTGGCCTGCCTGGAGGAGATCGCCTACCTGCAGAAGTTCATCACCCGCGACCAGCTCGT GGCCCGCGGCGAGATGTTCGCCAAGACCGCCTACGGGCAGAACCTGCTGCGCCTCGCCCGCGAGAGCGAGGACGATCTGC GCCTGCGCCGGGGCAAGTAG
Upstream 100 bases:
>100_bases TCACGGCCGCCTACGGCATCGCGCCGCGGCCCTGGCAGGCGGCGCTCGACGACATCCTGGACCGGCTCGTCGGGCCGGTC TCAGAGGGAGTTTCCAAGCC
Downstream 100 bases:
>100_bases TCCCGCCGGCGGCGCTCGGTCGCCGCCCCTCTACCGGGGGGCGCAGCCGATGCAGATGCCGCGCATGAGCCGGTCGTTCT TCGCCTCGCGCGGCGTGCGC
Product: glucose-1-phosphate thymidylyltransferase
Products: NA
Alternate protein names: dTDP-glucose pyrophosphorylase; dTDP-glucose synthase [H]
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MKGIVLAGGSGTRLHPATLSINKQLLPVYDKPMIYYPVSVLMLAGIREILIISSPEHLDNYKRLFGTGEQFGLKFSYALQ PRPEGLAQAFVIGRDFVGDDDVALILGDNLFFGAGMGELLERASSRKQGATVFAYHVDNPQAYGVVNLDKSGRPTKIVEK PQNPESTWAVTGLYFYDNQVLDIAADVKPSARGELEITSVNEAYLQHGQLHVERMSRGYAWLDTGTHDSLLEASEFVRTL QNRQGLQVACLEEIAYLQKFITRDQLVARGEMFAKTAYGQNLLRLARESEDDLRLRRGK
Sequences:
>Translated_299_residues MKGIVLAGGSGTRLHPATLSINKQLLPVYDKPMIYYPVSVLMLAGIREILIISSPEHLDNYKRLFGTGEQFGLKFSYALQ PRPEGLAQAFVIGRDFVGDDDVALILGDNLFFGAGMGELLERASSRKQGATVFAYHVDNPQAYGVVNLDKSGRPTKIVEK PQNPESTWAVTGLYFYDNQVLDIAADVKPSARGELEITSVNEAYLQHGQLHVERMSRGYAWLDTGTHDSLLEASEFVRTL QNRQGLQVACLEEIAYLQKFITRDQLVARGEMFAKTAYGQNLLRLARESEDDLRLRRGK >Mature_299_residues MKGIVLAGGSGTRLHPATLSINKQLLPVYDKPMIYYPVSVLMLAGIREILIISSPEHLDNYKRLFGTGEQFGLKFSYALQ PRPEGLAQAFVIGRDFVGDDDVALILGDNLFFGAGMGELLERASSRKQGATVFAYHVDNPQAYGVVNLDKSGRPTKIVEK PQNPESTWAVTGLYFYDNQVLDIAADVKPSARGELEITSVNEAYLQHGQLHVERMSRGYAWLDTGTHDSLLEASEFVRTL QNRQGLQVACLEEIAYLQKFITRDQLVARGEMFAKTAYGQNLLRLARESEDDLRLRRGK
Specific function: Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis [H]
COG id: COG1209
COG function: function code M; dTDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucose-1-phosphate thymidylyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI11761621, Length=251, Percent_Identity=26.6932270916335, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI11761619, Length=251, Percent_Identity=26.6932270916335, Blast_Score=84, Evalue=2e-16, Organism=Escherichia coli, GI1788351, Length=288, Percent_Identity=56.9444444444444, Blast_Score=359, Evalue=1e-101, Organism=Escherichia coli, GI1790224, Length=287, Percent_Identity=57.4912891986063, Blast_Score=352, Evalue=1e-98, Organism=Escherichia coli, GI1787488, Length=295, Percent_Identity=26.1016949152542, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1788355, Length=236, Percent_Identity=24.1525423728814, Blast_Score=69, Evalue=4e-13, Organism=Caenorhabditis elegans, GI133931050, Length=183, Percent_Identity=26.775956284153, Blast_Score=79, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6320148, Length=255, Percent_Identity=25.8823529411765, Blast_Score=80, Evalue=4e-16, Organism=Drosophila melanogaster, GI21355443, Length=245, Percent_Identity=24.8979591836735, Blast_Score=81, Evalue=7e-16, Organism=Drosophila melanogaster, GI24644084, Length=245, Percent_Identity=24.8979591836735, Blast_Score=81, Evalue=7e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005907 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.24 [H]
Molecular weight: Translated: 33326; Mature: 33326
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGIVLAGGSGTRLHPATLSINKQLLPVYDKPMIYYPVSVLMLAGIREILIISSPEHLDN CCCEEEECCCCCEECEEEEECCCCCCCCCCCCEEEHHHHHHHHHCCCEEEEECCCHHHHH YKRLFGTGEQFGLKFSYALQPRPEGLAQAFVIGRDFVGDDDVALILGDNLFFGAGMGELL HHHHHCCCHHHCEEEEEEECCCCHHHHHHHEECCCCCCCCCEEEEEECCEEEECCHHHHH ERASSRKQGATVFAYHVDNPQAYGVVNLDKSGRPTKIVEKPQNPESTWAVTGLYFYDNQV HHHHCCCCCCEEEEEECCCCCEEEEEEECCCCCCCHHCCCCCCCCCCEEEEEEEEECCEE LDIAADVKPSARGELEITSVNEAYLQHGQLHVERMSRGYAWLDTGTHDSLLEASEFVRTL EEEEECCCCCCCCCEEEEECCHHHHHCCHHEEEHHHCCEEEEECCCCHHHHHHHHHHHHH QNRQGLQVACLEEIAYLQKFITRDQLVARGEMFAKTAYGQNLLRLARESEDDLRLRRGK HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEECCC >Mature Secondary Structure MKGIVLAGGSGTRLHPATLSINKQLLPVYDKPMIYYPVSVLMLAGIREILIISSPEHLDN CCCEEEECCCCCEECEEEEECCCCCCCCCCCCEEEHHHHHHHHHCCCEEEEECCCHHHHH YKRLFGTGEQFGLKFSYALQPRPEGLAQAFVIGRDFVGDDDVALILGDNLFFGAGMGELL HHHHHCCCHHHCEEEEEEECCCCHHHHHHHEECCCCCCCCCEEEEEECCEEEECCHHHHH ERASSRKQGATVFAYHVDNPQAYGVVNLDKSGRPTKIVEKPQNPESTWAVTGLYFYDNQV HHHHCCCCCCEEEEEECCCCCEEEEEEECCCCCCCHHCCCCCCCCCCEEEEEEEEECCEE LDIAADVKPSARGELEITSVNEAYLQHGQLHVERMSRGYAWLDTGTHDSLLEASEFVRTL EEEEECCCCCCCCCEEEEECCHHHHHCCHHEEEHHHCCEEEEECCCCHHHHHHHHHHHHH QNRQGLQVACLEEIAYLQKFITRDQLVARGEMFAKTAYGQNLLRLARESEDDLRLRRGK HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7692217 [H]