| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170748744
Identifier: 170748744
GI number: 170748744
Start: 2462028
End: 2463668
Strand: Reverse
Name: 170748744
Synonym: Mrad2831_2326
Alternate gene names: NA
Gene position: 2463668-2462028 (Counterclockwise)
Preceding gene: 170748745
Following gene: 170748736
Centisome position: 40.54
GC content: 73.92
Gene sequence:
>1641_bases GTGACCGGCCCGGGCGGGCGCCTGCTGCGCTTCGGGGCCGCGCGCGGCGGCAACGTCGCGATCCTGGTGGCGCTCGGCAG CGCCATGCTGATGGGGGCGGGCGCGGTCGGGATCGATCTCGGGCTGGTCTTCCAGGCGCGGCGCAAGGCGCAAGGGGCGG CGGACATCGCCGCCATGCTGGCGGCCGTCGATCCGAGCCAAGCCGACACGGTCGCCCGCCGGTCGCTCAGCGACAACGGC TACGGTGCCGCGACCGCCACGGTCGCGCCCGGCAGCTACGACGCCAGCACCAGGGGCGTCGCTCCGGGCGGCCGGTTCAG CGCCGGCGGAAGCCCGGCGAACGCGGTGCGGGTCGGCCTCTCGACCTCGGTCCCGGTGACCTTCGGCCGGGCGATCGGCC TGCCCGCGGCGGTGCCGCTGCGGGTGACCGGCACCGCCGCGAGCGCGCAGTTCGCGGCCTTCACGATCGGATCCGGCACC CTGAGGCTCGAGGGCGGCATCGCCAACGCCCTGCTCGGTGCCTTGCTCGGGGCCAGGCTGTCGCTCAGCGTCAGCGACTA CGATGCCCTGGCCAGCGCCCGCGTCGACGGGCTGCGCGTCCTGGACTCCCTCGGGGCGAGCCTCAACATGCAGGCCGCGA ACTATACCGACATCGTCCAGGCGAATGCCAGCGTCGGTCAGTTGCTGATGGCGATCCGGGCCGCCGCGTCGGACAATGGC AGCGCGGCGTCGGCCCTGTCGGGGATCCTCAACGCCCTGCCGAACGCCGGAAACCTCGTCGCGATCGGTCAAGTGGACGG GCTCGGCGACGCCGCCGCGCTGGCGCCGCCCCGGGGCTTCGCCGGCCCCTCCCTCAACGTGCTGAACCTCCTGGGCGCCG CCGCCTCCCTGGCGAACGGCCAGAACCAGGTGGCGGTCGATCTCGGAGCCACCGTGCCGGGACTGCTCTCGACCCGGCTG ACCCTGGCGATCGGCGAGCGCAAGCGCAGCTCGGGCTGGGTCCGGCCGGGCAGCCAGAACGCCACCGTTCAGACGGCGCA GACCCGGCTGCTGATCGAGACCACCGTCACGGCGCCGCTCGGGCTCGGGACGCTCTCCCTGCCGGTCTACGCGGAAGTCG CACCGGCGCAGGCGACCCTGCGGTCGCTCAGCTGCGCCGGGTCCGGAGGACGCAAGGTCACCCTCGACGCGCAGACCGGA CTGGCGACGCTGGCCGTCGCCCAGATCCCGCGCGCCGCGATCACGGGGGGCAGCGCGGGCCCCGACCTGTCGCAGCCGGC CTCCCTGATCGCCCTGCCGCTGGTCAACGTCTCCGGGCGGGCCCACGCGACGCTCGGCACCGCGTCGCAGACCCTCGTGT TCTCGGACGCCGACATCGCCAACCACACCGTGCGCACGGTCGCCTCGGGCAACTTGACCCAGTCGCTCACCGGCAGCCTG CTGCGCAACCTCGTGCTGAACATCGACGGCCTCGGCGTGCCGCCGCTGCTCCAGTCGGCCCTGACGACGACGCTGGGCAC TGTGACCCCGGGGATCGACCTCGTGCTCGACACCGTCCTGCGCAGCCTCGGCCTGCGTCTGGGCTACGCCGATCTCGACG TCGACGGCACCCTCTGCAACCAGGCCGTGCTGGTGCAGTGA
Upstream 100 bases:
>100_bases CCCTCGACGCCTCGACGCTCGGCATCAACGTCTTCGCGCGCCTGCTGCCGATGCTCCCGACGGTGCTGCGCAGCAGCGTC AGCGTCCGGAAGGGCGGCCT
Downstream 100 bases:
>100_bases GCCGGGCCGGACGGTCCGGCGGGACGCGGCAGCCCCGCTCAGTGGCCGCCGCGGCGCGCGCCGGTCGCGGAGGCCTTGGC GATGCGCCGGCCGAGGTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 546; Mature: 545
Protein sequence:
>546_residues MTGPGGRLLRFGAARGGNVAILVALGSAMLMGAGAVGIDLGLVFQARRKAQGAADIAAMLAAVDPSQADTVARRSLSDNG YGAATATVAPGSYDASTRGVAPGGRFSAGGSPANAVRVGLSTSVPVTFGRAIGLPAAVPLRVTGTAASAQFAAFTIGSGT LRLEGGIANALLGALLGARLSLSVSDYDALASARVDGLRVLDSLGASLNMQAANYTDIVQANASVGQLLMAIRAAASDNG SAASALSGILNALPNAGNLVAIGQVDGLGDAAALAPPRGFAGPSLNVLNLLGAAASLANGQNQVAVDLGATVPGLLSTRL TLAIGERKRSSGWVRPGSQNATVQTAQTRLLIETTVTAPLGLGTLSLPVYAEVAPAQATLRSLSCAGSGGRKVTLDAQTG LATLAVAQIPRAAITGGSAGPDLSQPASLIALPLVNVSGRAHATLGTASQTLVFSDADIANHTVRTVASGNLTQSLTGSL LRNLVLNIDGLGVPPLLQSALTTTLGTVTPGIDLVLDTVLRSLGLRLGYADLDVDGTLCNQAVLVQ
Sequences:
>Translated_546_residues MTGPGGRLLRFGAARGGNVAILVALGSAMLMGAGAVGIDLGLVFQARRKAQGAADIAAMLAAVDPSQADTVARRSLSDNG YGAATATVAPGSYDASTRGVAPGGRFSAGGSPANAVRVGLSTSVPVTFGRAIGLPAAVPLRVTGTAASAQFAAFTIGSGT LRLEGGIANALLGALLGARLSLSVSDYDALASARVDGLRVLDSLGASLNMQAANYTDIVQANASVGQLLMAIRAAASDNG SAASALSGILNALPNAGNLVAIGQVDGLGDAAALAPPRGFAGPSLNVLNLLGAAASLANGQNQVAVDLGATVPGLLSTRL TLAIGERKRSSGWVRPGSQNATVQTAQTRLLIETTVTAPLGLGTLSLPVYAEVAPAQATLRSLSCAGSGGRKVTLDAQTG LATLAVAQIPRAAITGGSAGPDLSQPASLIALPLVNVSGRAHATLGTASQTLVFSDADIANHTVRTVASGNLTQSLTGSL LRNLVLNIDGLGVPPLLQSALTTTLGTVTPGIDLVLDTVLRSLGLRLGYADLDVDGTLCNQAVLVQ >Mature_545_residues TGPGGRLLRFGAARGGNVAILVALGSAMLMGAGAVGIDLGLVFQARRKAQGAADIAAMLAAVDPSQADTVARRSLSDNGY GAATATVAPGSYDASTRGVAPGGRFSAGGSPANAVRVGLSTSVPVTFGRAIGLPAAVPLRVTGTAASAQFAAFTIGSGTL RLEGGIANALLGALLGARLSLSVSDYDALASARVDGLRVLDSLGASLNMQAANYTDIVQANASVGQLLMAIRAAASDNGS AASALSGILNALPNAGNLVAIGQVDGLGDAAALAPPRGFAGPSLNVLNLLGAAASLANGQNQVAVDLGATVPGLLSTRLT LAIGERKRSSGWVRPGSQNATVQTAQTRLLIETTVTAPLGLGTLSLPVYAEVAPAQATLRSLSCAGSGGRKVTLDAQTGL ATLAVAQIPRAAITGGSAGPDLSQPASLIALPLVNVSGRAHATLGTASQTLVFSDADIANHTVRTVASGNLTQSLTGSLL RNLVLNIDGLGVPPLLQSALTTTLGTVTPGIDLVLDTVLRSLGLRLGYADLDVDGTLCNQAVLVQ
Specific function: Unknown
COG id: COG4655
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53997; Mature: 53866
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGPGGRLLRFGAARGGNVAILVALGSAMLMGAGAVGIDLGLVFQARRKAQGAADIAAML CCCCCCCEEEEECCCCCCEEEEEEECCHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHH AAVDPSQADTVARRSLSDNGYGAATATVAPGSYDASTRGVAPGGRFSAGGSPANAVRVGL HHCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC STSVPVTFGRAIGLPAAVPLRVTGTAASAQFAAFTIGSGTLRLEGGIANALLGALLGARL CCCCCEEEHHHCCCCCCCEEEEECCCCCCEEEEEEECCCEEEECCCHHHHHHHHHHCCCE SLSVSDYDALASARVDGLRVLDSLGASLNMQAANYTDIVQANASVGQLLMAIRAAASDNG EEEECHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHEECCCHHHHHHHHHHHHCCCCC SAASALSGILNALPNAGNLVAIGQVDGLGDAAALAPPRGFAGPSLNVLNLLGAAASLANG HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHCCC QNQVAVDLGATVPGLLSTRLTLAIGERKRSSGWVRPGSQNATVQTAQTRLLIETTVTAPL CCEEEEEECCCCCHHHHHEEEEEECCCCCCCCCCCCCCCCCEEEECCEEEEEEEEECCCC GLGTLSLPVYAEVAPAQATLRSLSCAGSGGRKVTLDAQTGLATLAVAQIPRAAITGGSAG CCCEECCCEEEECCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHCCHHHCCCCCCC PDLSQPASLIALPLVNVSGRAHATLGTASQTLVFSDADIANHTVRTVASGNLTQSLTGSL CCCCCCCCEEEEEEEECCCCCEEEECCCCEEEEEECCCCCCCCEEEEECCCCHHHHHHHH LRNLVLNIDGLGVPPLLQSALTTTLGTVTPGIDLVLDTVLRSLGLRLGYADLDVDGTLCN HHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEECEEECCCCCHHHC QAVLVQ CEEEEC >Mature Secondary Structure TGPGGRLLRFGAARGGNVAILVALGSAMLMGAGAVGIDLGLVFQARRKAQGAADIAAML CCCCCCEEEEECCCCCCEEEEEEECCHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHH AAVDPSQADTVARRSLSDNGYGAATATVAPGSYDASTRGVAPGGRFSAGGSPANAVRVGL HHCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC STSVPVTFGRAIGLPAAVPLRVTGTAASAQFAAFTIGSGTLRLEGGIANALLGALLGARL CCCCCEEEHHHCCCCCCCEEEEECCCCCCEEEEEEECCCEEEECCCHHHHHHHHHHCCCE SLSVSDYDALASARVDGLRVLDSLGASLNMQAANYTDIVQANASVGQLLMAIRAAASDNG EEEECHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHEECCCHHHHHHHHHHHHCCCCC SAASALSGILNALPNAGNLVAIGQVDGLGDAAALAPPRGFAGPSLNVLNLLGAAASLANG HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHCCC QNQVAVDLGATVPGLLSTRLTLAIGERKRSSGWVRPGSQNATVQTAQTRLLIETTVTAPL CCEEEEEECCCCCHHHHHEEEEEECCCCCCCCCCCCCCCCCEEEECCEEEEEEEEECCCC GLGTLSLPVYAEVAPAQATLRSLSCAGSGGRKVTLDAQTGLATLAVAQIPRAAITGGSAG CCCEECCCEEEECCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHCCHHHCCCCCCC PDLSQPASLIALPLVNVSGRAHATLGTASQTLVFSDADIANHTVRTVASGNLTQSLTGSL CCCCCCCCEEEEEEEECCCCCEEEECCCCEEEEEECCCCCCCCEEEEECCCCHHHHHHHH LRNLVLNIDGLGVPPLLQSALTTTLGTVTPGIDLVLDTVLRSLGLRLGYADLDVDGTLCN HHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEECEEECCCCCHHHC QAVLVQ CEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA