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The map label for this gene is yciR [C]

Identifier: 170748341

GI number: 170748341

Start: 2040311

End: 2041381

Strand: Reverse

Name: yciR [C]

Synonym: Mrad2831_1923

Alternate gene names: 170748341

Gene position: 2041381-2040311 (Counterclockwise)

Preceding gene: 170748342

Following gene: 170748335

Centisome position: 33.59

GC content: 78.52

Gene sequence:

>1071_bases
ATGGCGGCGGAGGCGGGCAGGGCGGCGACGAGGCTGGCGCGGCGCCACCGGCAGGTGGCCTGCGACCGGCGCCAGGACGG
GCTCGGCCGCGGGCGCAAGCTCGGACCCGGCATCGTTCAGGCGCTGGATTCGCTGCCGCACGGCCTGTGCCTGTTCGATT
CCGCCGACCGGCTGCTGTTCGTGAGCGACGGGTTCCGGCGCCTGTTCGGCCCGCCCGCGAGCCGGGTCCGGCCCGGCATG
CACGCCCGGGCGGTGGGCGCGGCGAGCGCGGCGGGGGCCCTCCCGGCCGACCGGGATCCCTGCGGCCTCTGGGCGGCGCG
CCGGCGGCTCCTCGCCCGGGGCGCGACCGACGCCGTGGTGCAGACGCTCGCGGACGGGCGCCAGATCGCGATCACGCTGC
ACCCGCAGGCCGGCGGCGCCTGGACCGCCCTGTGGGAGGACGTGACCGAGCGCTGCCGGGCGGAGTCGCTCCTGCGCTAC
ATGGCCCACCACGACCCGCTGACCGGCCTGCCGAACCGCCGCCTGTTCGCGGCCCGGCTCGAGCGGACCCTGGCGGACCT
CGACGGCGCGCCCTGCGCGCTGCTGTGCCTCGACCTCGACGGCTTCAAGCCGGTGAACGACCGCCACGGGCACGCGGTGG
GCGACGCGCTCCTGCGGCAGCTGGCCGAGCGCCTGCGGGCGGCGCTCGGCGCGGGCGATTGCGCCGCGCGGCTCGGCGGC
GACGAGTTCACCATCCTGCTCGGCGACGCGGCGCCGGCGCCGGCCCTCGGCTTCGCCCTGCGCCTCCAGGCGCGCCTCGC
CGAGCCGTACGATCTCGGGACCGGATCGCCGATCCGCATCGGCGCGGCGATCGGCGTGGCCTGCGCGCCCCTGCACGCGA
TCCGGGCGCAAACCCTGGTGGAGCGGGCGGACGCGGCGATGTACGCGGCCAAGCGCCTCGGCCACCCCTACCTGTGGGAC
GACGCGCTGGGTCCGGGGCCGGCGGATCCGGGCAGGGCGCCGCCGGCCTGCGGCGGCCGGGACGGCGCTCAGCGCGCCTT
CTCGTGCTCCGCGAGGCCCACGGCCCTGTAA

Upstream 100 bases:

>100_bases
CGAAAGGAATCCCATTCTATGAAGGCCGGAGACTAATTTCCGAGCCGGCTCGATCCGGCAATCGCCCGACGACGCTGTCG
GGCGCTTCGGGGGACCGGCC

Downstream 100 bases:

>100_bases
TCGTAGGTCGGGAAGAACTCGGTGCGGTAGGCCCCCCAGGCCGTGTCCTCGAGGACGCGGTTGACCTCGCGCAGGCGGGA
CGCGGGCAGCCGCAGGACGA

Product: diguanylate cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MAAEAGRAATRLARRHRQVACDRRQDGLGRGRKLGPGIVQALDSLPHGLCLFDSADRLLFVSDGFRRLFGPPASRVRPGM
HARAVGAASAAGALPADRDPCGLWAARRRLLARGATDAVVQTLADGRQIAITLHPQAGGAWTALWEDVTERCRAESLLRY
MAHHDPLTGLPNRRLFAARLERTLADLDGAPCALLCLDLDGFKPVNDRHGHAVGDALLRQLAERLRAALGAGDCAARLGG
DEFTILLGDAAPAPALGFALRLQARLAEPYDLGTGSPIRIGAAIGVACAPLHAIRAQTLVERADAAMYAAKRLGHPYLWD
DALGPGPADPGRAPPACGGRDGAQRAFSCSARPTAL

Sequences:

>Translated_356_residues
MAAEAGRAATRLARRHRQVACDRRQDGLGRGRKLGPGIVQALDSLPHGLCLFDSADRLLFVSDGFRRLFGPPASRVRPGM
HARAVGAASAAGALPADRDPCGLWAARRRLLARGATDAVVQTLADGRQIAITLHPQAGGAWTALWEDVTERCRAESLLRY
MAHHDPLTGLPNRRLFAARLERTLADLDGAPCALLCLDLDGFKPVNDRHGHAVGDALLRQLAERLRAALGAGDCAARLGG
DEFTILLGDAAPAPALGFALRLQARLAEPYDLGTGSPIRIGAAIGVACAPLHAIRAQTLVERADAAMYAAKRLGHPYLWD
DALGPGPADPGRAPPACGGRDGAQRAFSCSARPTAL
>Mature_355_residues
AAEAGRAATRLARRHRQVACDRRQDGLGRGRKLGPGIVQALDSLPHGLCLFDSADRLLFVSDGFRRLFGPPASRVRPGMH
ARAVGAASAAGALPADRDPCGLWAARRRLLARGATDAVVQTLADGRQIAITLHPQAGGAWTALWEDVTERCRAESLLRYM
AHHDPLTGLPNRRLFAARLERTLADLDGAPCALLCLDLDGFKPVNDRHGHAVGDALLRQLAERLRAALGAGDCAARLGGD
EFTILLGDAAPAPALGFALRLQARLAEPYDLGTGSPIRIGAAIGVACAPLHAIRAQTLVERADAAMYAAKRLGHPYLWDD
ALGPGPADPGRAPPACGGRDGAQRAFSCSARPTAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MHYT domain [H]

Homologues:

Organism=Escherichia coli, GI1787541, Length=168, Percent_Identity=35.1190476190476, Blast_Score=108, Evalue=5e-25,
Organism=Escherichia coli, GI1788381, Length=171, Percent_Identity=39.1812865497076, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI145693134, Length=163, Percent_Identity=33.7423312883436, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI1788956, Length=163, Percent_Identity=39.2638036809816, Blast_Score=91, Evalue=9e-20,
Organism=Escherichia coli, GI87081977, Length=170, Percent_Identity=34.1176470588235, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1787262, Length=176, Percent_Identity=31.8181818181818, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI87082007, Length=179, Percent_Identity=34.6368715083799, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI87081881, Length=172, Percent_Identity=37.2093023255814, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI87081974, Length=104, Percent_Identity=37.5, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1787816, Length=162, Percent_Identity=32.7160493827161, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1786584, Length=186, Percent_Identity=27.9569892473118, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR005330 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF03707 MHYT [H]

EC number: NA

Molecular weight: Translated: 37531; Mature: 37400

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAEAGRAATRLARRHRQVACDRRQDGLGRGRKLGPGIVQALDSLPHGLCLFDSADRLLF
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCEEE
VSDGFRRLFGPPASRVRPGMHARAVGAASAAGALPADRDPCGLWAARRRLLARGATDAVV
ECCCHHHHHCCCHHHHCCCCHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHH
QTLADGRQIAITLHPQAGGAWTALWEDVTERCRAESLLRYMAHHDPLTGLPNRRLFAARL
HHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
ERTLADLDGAPCALLCLDLDGFKPVNDRHGHAVGDALLRQLAERLRAALGAGDCAARLGG
HHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
DEFTILLGDAAPAPALGFALRLQARLAEPYDLGTGSPIRIGAAIGVACAPLHAIRAQTLV
CEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH
ERADAAMYAAKRLGHPYLWDDALGPGPADPGRAPPACGGRDGAQRAFSCSARPTAL
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AAEAGRAATRLARRHRQVACDRRQDGLGRGRKLGPGIVQALDSLPHGLCLFDSADRLLF
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCEEE
VSDGFRRLFGPPASRVRPGMHARAVGAASAAGALPADRDPCGLWAARRRLLARGATDAVV
ECCCHHHHHCCCHHHHCCCCHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHH
QTLADGRQIAITLHPQAGGAWTALWEDVTERCRAESLLRYMAHHDPLTGLPNRRLFAARL
HHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
ERTLADLDGAPCALLCLDLDGFKPVNDRHGHAVGDALLRQLAERLRAALGAGDCAARLGG
HHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
DEFTILLGDAAPAPALGFALRLQARLAEPYDLGTGSPIRIGAAIGVACAPLHAIRAQTLV
CEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH
ERADAAMYAAKRLGHPYLWDDALGPGPADPGRAPPACGGRDGAQRAFSCSARPTAL
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]