| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is thrS [H]
Identifier: 170748342
GI number: 170748342
Start: 2041671
End: 2043698
Strand: Reverse
Name: thrS [H]
Synonym: Mrad2831_1924
Alternate gene names: 170748342
Gene position: 2043698-2041671 (Counterclockwise)
Preceding gene: 170748344
Following gene: 170748341
Centisome position: 33.63
GC content: 69.87
Gene sequence:
>2028_bases ATGCCGATTCTCACCTTCCCCGACGGCAACACGCGGGAGATCGCCGCCGGCACCACCGGCCGCGCCGTGGTCGAGGGCAT CGCCAAGTCGCTGGCCAAGCGCACCGTCGCCATGGCGCTCGACGGCACGGTCGCCGACCTCGACGACCCGATCGACCGCG ATGCCCGCATCGAGTTCCTGGACCGCACCGACCCGCGCAGCCTGGAGCTGATCCGCCACGACTGCGCGCACGTGCTCGCC GAGGCCGTGCAGGCGCTCTGGCCGGAGACGCAGGTCACGATCGGCCCGGTGATCGAGAACGGCTTCTACTACGACTTCCA CCGCGAGACCCCGTTCACGCCCGAGGACTTCCCGAAGATCGAGGCGAAGATGCGCGAGATCATCGCGCGCGACGCGCCCT TCACCAAGGAGGTCTGGACGCGCGACGACGTGCGCGGCCTGTTCGCCGGCAAGGGTGAGGGCTTCAAGGTCGAGCTGGTC GACGCGATCCCGCCGGGCGAGGACCTGAAGATCTACCGCCAGGGCGACTGGTTCGACCTCTGCCGCGGCCCGCACATGAC CTCGACCGGCAAGGTCGGCACGGCCTTCAAGCTGATGAAGGTCGCGGGCGCTTACTGGCGGGGTGATTCGAACAACCCGA TGCTGACCCGCATCTACGGGACGGCCTGGGCGAACCAGGCCGACCTCGACGATTACCTGCACCGGCTGGAGGAGGCCGAG CGCCGCGACCACCGCCGGCTCGGCCGCGAGATGGACCTGTTCCACTTCCAGGAGGAGGGCCCGGGCGTCGTCTTCTGGCA CGCCAAGGGCTGGACGATCTTCCAGGAGCTGATCGCCTACATGCGCCGGCGCCTGCGCGGCGACTACGCCGAGGTGAACG CCCCGCAGATCCTCGACAAGGCCCTGTGGGAGACCTCCGGCCACTGGGGGTGGTACCGGGAGAACATGTTCGCCGCGCAG TCCGCGGGCGAGGAGGCCGAGGACAAGCGCTGGTTCGCCCTCAAGCCGATGAACTGCCCGGGCCACGTGCAGATCTTCAA GCACGGCCTGAAATCCTACCGCGACCTGCCCCTGCGCATGGCCGAGTTCGGCATCGTCCACCGCTACGAGCCGTCCGGCG CCATGCACGGGCTGATGCGCGTGCGCGGCTTCACGCAGGACGACGCCCACGTCTTCTGCACCGAGGACCAGCTCGCCGAC GAGTGCCTGAAGATCAACGACCTGATCCTCTCGACCTACGCGGATTTCGGCTTCGACCAGATCGTCGTGAAGCTCTCGAC GCGGCCCGAGAAGCGCGTCGGCTCCGACGCCCTCTGGGACCACGCCGAGGACGTGATGACCCGCGTGCTGGCGCAGATCG AGGAGCAGTCCGGCGGGCGGATCCGGACCGCGGTCAACCCGGGGGAGGGCGCGTTCTACGGGCCCAAATTCGAGTACGTG CTGCGCGACGCCATCGGCCGCGACTGGCAGTGCGGGACCACGCAGGTGGATTTCAACCTGCCCGAGCGGTTCGGCGCCTT CTACATCGACGCCGACGGCGCCCGGAAGCCGCCCGTCATGGTCCACCGGGCGATCTGCGGCTCGATGGAGCGCTTCACCG GCATCCTGATCGAGCACTTCGCCGGGCACTTCCCCCTGTGGCTGGCGCCGGTCCAGGTCGTGGTGGCGACGATCACCGGC GAGGCCGACGCCTACGCCCGGGACGTCATCCGCACCCTGGAGCGCGCGGGCCTGCGGGTCGAGGCGGATCTGCGCAACGA GAAGATCAACTACAAGGTCCGCGAGCACTCGCTGGCCAAGGTGCCGGTGCTGCTGGCGCTCGGCCGCCGCGAGGCGGAGG AGCGGACGGTCTCGATCCGGCGGCTCGGCAGCCAGCAGACCCGCACGCTGCCGCTGACCGAGGCCGTGGCGGCCTTCGTG GAGGAGGCGACCGCGCCGGATATCCGCCGCGCCGAGGCGGTCGCCGCGACGGTCCCGACCAGCGACACGGTGCTCGACGC CCACCACGACCGGCACGACGCGCCCTGA
Upstream 100 bases:
>100_bases CACCGTTGTTCCCTCGCCCGAGAAATCGGTCTACACGGCCGCTCCCTCGAAATCGCTTACCTGCCCCGTATGCAGGACTG AGCCCGGAGACGCGCGCACC
Downstream 100 bases:
>100_bases CGGGGCCTCCGGAAGACGTCGTCCCGGCGCCGCGCGGCGGCGCCCGGGACGACAGCGCGGATCCACCGCGTCGAGGCCGG GTTCGAGCCGGCGACCGACA
Product: threonyl-tRNA synthetase
Products: NA
Alternate protein names: Threonine--tRNA ligase; ThrRS [H]
Number of amino acids: Translated: 675; Mature: 674
Protein sequence:
>675_residues MPILTFPDGNTREIAAGTTGRAVVEGIAKSLAKRTVAMALDGTVADLDDPIDRDARIEFLDRTDPRSLELIRHDCAHVLA EAVQALWPETQVTIGPVIENGFYYDFHRETPFTPEDFPKIEAKMREIIARDAPFTKEVWTRDDVRGLFAGKGEGFKVELV DAIPPGEDLKIYRQGDWFDLCRGPHMTSTGKVGTAFKLMKVAGAYWRGDSNNPMLTRIYGTAWANQADLDDYLHRLEEAE RRDHRRLGREMDLFHFQEEGPGVVFWHAKGWTIFQELIAYMRRRLRGDYAEVNAPQILDKALWETSGHWGWYRENMFAAQ SAGEEAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPLRMAEFGIVHRYEPSGAMHGLMRVRGFTQDDAHVFCTEDQLAD ECLKINDLILSTYADFGFDQIVVKLSTRPEKRVGSDALWDHAEDVMTRVLAQIEEQSGGRIRTAVNPGEGAFYGPKFEYV LRDAIGRDWQCGTTQVDFNLPERFGAFYIDADGARKPPVMVHRAICGSMERFTGILIEHFAGHFPLWLAPVQVVVATITG EADAYARDVIRTLERAGLRVEADLRNEKINYKVREHSLAKVPVLLALGRREAEERTVSIRRLGSQQTRTLPLTEAVAAFV EEATAPDIRRAEAVAATVPTSDTVLDAHHDRHDAP
Sequences:
>Translated_675_residues MPILTFPDGNTREIAAGTTGRAVVEGIAKSLAKRTVAMALDGTVADLDDPIDRDARIEFLDRTDPRSLELIRHDCAHVLA EAVQALWPETQVTIGPVIENGFYYDFHRETPFTPEDFPKIEAKMREIIARDAPFTKEVWTRDDVRGLFAGKGEGFKVELV DAIPPGEDLKIYRQGDWFDLCRGPHMTSTGKVGTAFKLMKVAGAYWRGDSNNPMLTRIYGTAWANQADLDDYLHRLEEAE RRDHRRLGREMDLFHFQEEGPGVVFWHAKGWTIFQELIAYMRRRLRGDYAEVNAPQILDKALWETSGHWGWYRENMFAAQ SAGEEAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPLRMAEFGIVHRYEPSGAMHGLMRVRGFTQDDAHVFCTEDQLAD ECLKINDLILSTYADFGFDQIVVKLSTRPEKRVGSDALWDHAEDVMTRVLAQIEEQSGGRIRTAVNPGEGAFYGPKFEYV LRDAIGRDWQCGTTQVDFNLPERFGAFYIDADGARKPPVMVHRAICGSMERFTGILIEHFAGHFPLWLAPVQVVVATITG EADAYARDVIRTLERAGLRVEADLRNEKINYKVREHSLAKVPVLLALGRREAEERTVSIRRLGSQQTRTLPLTEAVAAFV EEATAPDIRRAEAVAATVPTSDTVLDAHHDRHDAP >Mature_674_residues PILTFPDGNTREIAAGTTGRAVVEGIAKSLAKRTVAMALDGTVADLDDPIDRDARIEFLDRTDPRSLELIRHDCAHVLAE AVQALWPETQVTIGPVIENGFYYDFHRETPFTPEDFPKIEAKMREIIARDAPFTKEVWTRDDVRGLFAGKGEGFKVELVD AIPPGEDLKIYRQGDWFDLCRGPHMTSTGKVGTAFKLMKVAGAYWRGDSNNPMLTRIYGTAWANQADLDDYLHRLEEAER RDHRRLGREMDLFHFQEEGPGVVFWHAKGWTIFQELIAYMRRRLRGDYAEVNAPQILDKALWETSGHWGWYRENMFAAQS AGEEAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPLRMAEFGIVHRYEPSGAMHGLMRVRGFTQDDAHVFCTEDQLADE CLKINDLILSTYADFGFDQIVVKLSTRPEKRVGSDALWDHAEDVMTRVLAQIEEQSGGRIRTAVNPGEGAFYGPKFEYVL RDAIGRDWQCGTTQVDFNLPERFGAFYIDADGARKPPVMVHRAICGSMERFTGILIEHFAGHFPLWLAPVQVVVATITGE ADAYARDVIRTLERAGLRVEADLRNEKINYKVREHSLAKVPVLLALGRREAEERTVSIRRLGSQQTRTLPLTEAVAAFVE EATAPDIRRAEAVAATVPTSDTVLDAHHDRHDAP
Specific function: Thrs Is Also A Translational Repressor Protein, It Controls The Translation Of Its Own Gene By Binding To Its mRNA. [C]
COG id: COG0441
COG function: function code J; Threonyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI38202255, Length=625, Percent_Identity=39.36, Blast_Score=440, Evalue=1e-123, Organism=Homo sapiens, GI38570111, Length=623, Percent_Identity=36.7576243980738, Blast_Score=419, Evalue=1e-117, Organism=Homo sapiens, GI20070344, Length=655, Percent_Identity=36.9465648854962, Blast_Score=402, Evalue=1e-112, Organism=Escherichia coli, GI1788013, Length=654, Percent_Identity=48.4709480122324, Blast_Score=661, Evalue=0.0, Organism=Caenorhabditis elegans, GI71984184, Length=644, Percent_Identity=38.6645962732919, Blast_Score=457, Evalue=1e-129, Organism=Caenorhabditis elegans, GI71984192, Length=644, Percent_Identity=38.6645962732919, Blast_Score=457, Evalue=1e-129, Organism=Saccharomyces cerevisiae, GI6322112, Length=675, Percent_Identity=37.6296296296296, Blast_Score=442, Evalue=1e-125, Organism=Saccharomyces cerevisiae, GI6322654, Length=425, Percent_Identity=34.3529411764706, Blast_Score=268, Evalue=3e-72, Organism=Drosophila melanogaster, GI24583842, Length=624, Percent_Identity=38.9423076923077, Blast_Score=441, Evalue=1e-124, Organism=Drosophila melanogaster, GI28574141, Length=624, Percent_Identity=38.9423076923077, Blast_Score=441, Evalue=1e-124, Organism=Drosophila melanogaster, GI24583839, Length=624, Percent_Identity=38.9423076923077, Blast_Score=441, Evalue=1e-123,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002314 - InterPro: IPR006195 - InterPro: IPR004154 - InterPro: IPR012675 - InterPro: IPR004095 - InterPro: IPR012676 - InterPro: IPR002320 - InterPro: IPR018163 - InterPro: IPR012947 [H]
Pfam domain/function: PF03129 HGTP_anticodon; PF02824 TGS; PF00587 tRNA-synt_2b; PF07973 tRNA_SAD [H]
EC number: =6.1.1.3 [H]
Molecular weight: Translated: 76317; Mature: 76186
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: PS50862 AA_TRNA_LIGASE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPILTFPDGNTREIAAGTTGRAVVEGIAKSLAKRTVAMALDGTVADLDDPIDRDARIEFL CCEEECCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCEEEEE DRTDPRSLELIRHDCAHVLAEAVQALWPETQVTIGPVIENGFYYDFHRETPFTPEDFPKI CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEECCCCCCCCCCCHHH EAKMREIIARDAPFTKEVWTRDDVRGLFAGKGEGFKVELVDAIPPGEDLKIYRQGDWFDL HHHHHHHHHCCCCCCHHHHCCHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEECCCHHHH CRGPHMTSTGKVGTAFKLMKVAGAYWRGDSNNPMLTRIYGTAWANQADLDDYLHRLEEAE HCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHH RRDHRRLGREMDLFHFQEEGPGVVFWHAKGWTIFQELIAYMRRRLRGDYAEVNAPQILDK HHHHHHHCCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHCCCHHCCCCHHHHHH ALWETSGHWGWYRENMFAAQSAGEEAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPLRM HHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCHHH AEFGIVHRYEPSGAMHGLMRVRGFTQDDAHVFCTEDQLADECLKINDLILSTYADFGFDQ HHHCCEEEECCCHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCEE IVVKLSTRPEKRVGSDALWDHAEDVMTRVLAQIEEQSGGRIRTAVNPGEGAFYGPKFEYV EEEEECCCCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHH LRDAIGRDWQCGTTQVDFNLPERFGAFYIDADGARKPPVMVHRAICGSMERFTGILIEHF HHHHCCCCCCCCCEEEECCCHHHHCEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHH AGHFPLWLAPVQVVVATITGEADAYARDVIRTLERAGLRVEADLRNEKINYKVREHSLAK CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEECCCCHHH VPVLLALGRREAEERTVSIRRLGSQQTRTLPLTEAVAAFVEEATAPDIRRAEAVAATVPT HHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHEEECCC SDTVLDAHHDRHDAP CCCEECCCCCCCCCC >Mature Secondary Structure PILTFPDGNTREIAAGTTGRAVVEGIAKSLAKRTVAMALDGTVADLDDPIDRDARIEFL CEEECCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCEEEEE DRTDPRSLELIRHDCAHVLAEAVQALWPETQVTIGPVIENGFYYDFHRETPFTPEDFPKI CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEECCCCCCCCCCCHHH EAKMREIIARDAPFTKEVWTRDDVRGLFAGKGEGFKVELVDAIPPGEDLKIYRQGDWFDL HHHHHHHHHCCCCCCHHHHCCHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEECCCHHHH CRGPHMTSTGKVGTAFKLMKVAGAYWRGDSNNPMLTRIYGTAWANQADLDDYLHRLEEAE HCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHH RRDHRRLGREMDLFHFQEEGPGVVFWHAKGWTIFQELIAYMRRRLRGDYAEVNAPQILDK HHHHHHHCCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHCCCHHCCCCHHHHHH ALWETSGHWGWYRENMFAAQSAGEEAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPLRM HHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCHHH AEFGIVHRYEPSGAMHGLMRVRGFTQDDAHVFCTEDQLADECLKINDLILSTYADFGFDQ HHHCCEEEECCCHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCEE IVVKLSTRPEKRVGSDALWDHAEDVMTRVLAQIEEQSGGRIRTAVNPGEGAFYGPKFEYV EEEEECCCCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHH LRDAIGRDWQCGTTQVDFNLPERFGAFYIDADGARKPPVMVHRAICGSMERFTGILIEHF HHHHCCCCCCCCCEEEECCCHHHHCEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHH AGHFPLWLAPVQVVVATITGEADAYARDVIRTLERAGLRVEADLRNEKINYKVREHSLAK CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEECCCCHHH VPVLLALGRREAEERTVSIRRLGSQQTRTLPLTEAVAAFVEEATAPDIRRAEAVAATVPT HHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHEEECCC SDTVLDAHHDRHDAP CCCEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA