| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is cysJ [H]
Identifier: 170748202
GI number: 170748202
Start: 1902128
End: 1903897
Strand: Reverse
Name: cysJ [H]
Synonym: Mrad2831_1784
Alternate gene names: 170748202
Gene position: 1903897-1902128 (Counterclockwise)
Preceding gene: 170748203
Following gene: 170748201
Centisome position: 31.33
GC content: 72.99
Gene sequence:
>1770_bases ATGTCCCGCCCCAATCTCCTCCCGCGCACCGCCCCGTTCGGGGACGGCGAGCGCGCCAGCCTCGACGCGGTGCTCGGCAC CGCGAGCCCCACGCAGCGCGCCTGGCTCGCCGGCTTCCTGGCCGGGCTCGACGCCGCGGGCGGCCAGCCGGCCGCGGTGC CGGCCGCCCCGCCCAAGGCCGCCGCGCCGCTCACCGTGATCTACGCCAGCGAATCGGGGAACTCCGAGGCGCTCGCCGGC AACGTCGCCAAGCTCGCGCGCAAGCAGGGCTTCAAGCCGAAGGTCGTGGACTTCTCCGACCTCGACGTCGCGACCCTGCC CAAGGCCGGCAAGCTGATCGCCATCGCGGCGACCTGGGGCGAGGGCGAGCCGCCGGCCCGGGCCGTGCGGGCCTACGGCG AGTTGATGGGGGAGGGCGCCCCGCGCCTCGACGGCGTCGAGTTCGCGGTCCTGTCGCTCGGCGACACCTCCTACGCGGAG TTCTGCGCCATCGGTAAGGCGCTCGACGCGCGCTTCGAGGCCCTGGGGGCTAAGCGCGCCGCCGAGCGCGCCGACCTCGA CCTCGACTTCGAGAAGCCCGCCGCCGACTGGATCAAGGGCGCGCTGAAGGCGCTCGCCCCGGCGGAGCAGCCCGACAACG TCGTGGCGGTGGACTTCGCCCGCGCCGGCGCCGGCGAGGACGACGAGGCCGAGCCGAGCCGCGAGCCCCTGGTGGTCGAG GTCGTCGAGCACGTGAACCTCAACTCGTCGCGCTCCGACAAGGAGACGATCCACCTCGCGCTGGCCTTCGAGGACGGCGC GCCGGCCTACGAGCCGGGCGACTCGCTGGAGATCTTCCCCGAGAACGACCCGCAGCTGGTGGACGAGATCCTGAACGCCG CCGGTCTCGCGGGCGACGAGGCCCTGCGCCGGGCCCTGCTCGCCGAGCGGGACATCACCACGCTCTCGGCCGCCACGATC GAGCGGTTCGTGAAGGCCACCGGCCACGCGGACGCGCAGACGCTCATCGACAGCGGCGAGGCCAAGGCCTGGGTCGAGGG CCGGCACCTGATCGACTTGCTGGAGACCTACCCGGCGAAGCTCACGGCCGAGCATATCGGCACGATCACCCGGCCGCTGC CGCCGCGGGCCTACTCGATCGCCTCCTCCCGCAAGGAGGTGGGCGACGAGGTCCACCTCGCCATCGCGGCGGTGCGCTAC GAGACCCACGGCCGGGCCCGCTCGGGCGTCGCCTCGGTCCACGTCGCCGACCGGATCCGCGACGGCGCCAAGCTGCGGGT GCGGCTGAAGCCGAACCGCCACTTCCGCCTGCCGCAGGATCCGGCCACCGACATCATCATGGTCGGCCCCGGCACCGGCG TCGCGCCGTTCCGCGCCTTCGTGCAGGAGCGCCGGGCCGTGGAAGCCCCCGGGCGGTCGTGGCTGTTCTTCGGCGACCGG CACTTCACCCACGACTTCCTGTACCAGCTCGAGTGGCAGGACGCCCTGGAGGACGGGTCGCTCACCAAGATCGACGTCGC CTTCTCGCGGGACCAGCCGGAGAAGGTCTACGTGCAGGACCGGATCACCCAGCACGCGCAGGAGCTGGTCTCCTGGCTGG ACGGGGGCGCGCATCTCTACGTCTGCGGCGACGCGAAGAACATGGCCAAGGACGTGCGCGCCGCGGTCGTGAAGGCCTAC GAGACGGCCAAGAGCCTGAGCGCCGCCGACGCCGAGGCGCAGGTCGCGGCTCTGGAGCGCAGCCACCGCTACCAGCAGGA CGTTTACTGA
Upstream 100 bases:
>100_bases TTCGCAGCGCAGCGAATGTGATGTCCTATACGCCGCCCGTTCTGCAAAACGAACGTTTCTCGATTGACACAGGCCCTACC GGCCCCGACATGGTCCCGTG
Downstream 100 bases:
>100_bases GGACACACCGCTCCCCGCACCGCGGGGGGCCTTCGACGAGATGCGGCAGAGACAGGCGTGACGCAGGTCCCCTCTCCCGG GCGGGAGAGGGGCAGGGTGA
Product: flavodoxin/nitric oxide synthase
Products: NA
Alternate protein names: SiR-FP [H]
Number of amino acids: Translated: 589; Mature: 588
Protein sequence:
>589_residues MSRPNLLPRTAPFGDGERASLDAVLGTASPTQRAWLAGFLAGLDAAGGQPAAVPAAPPKAAAPLTVIYASESGNSEALAG NVAKLARKQGFKPKVVDFSDLDVATLPKAGKLIAIAATWGEGEPPARAVRAYGELMGEGAPRLDGVEFAVLSLGDTSYAE FCAIGKALDARFEALGAKRAAERADLDLDFEKPAADWIKGALKALAPAEQPDNVVAVDFARAGAGEDDEAEPSREPLVVE VVEHVNLNSSRSDKETIHLALAFEDGAPAYEPGDSLEIFPENDPQLVDEILNAAGLAGDEALRRALLAERDITTLSAATI ERFVKATGHADAQTLIDSGEAKAWVEGRHLIDLLETYPAKLTAEHIGTITRPLPPRAYSIASSRKEVGDEVHLAIAAVRY ETHGRARSGVASVHVADRIRDGAKLRVRLKPNRHFRLPQDPATDIIMVGPGTGVAPFRAFVQERRAVEAPGRSWLFFGDR HFTHDFLYQLEWQDALEDGSLTKIDVAFSRDQPEKVYVQDRITQHAQELVSWLDGGAHLYVCGDAKNMAKDVRAAVVKAY ETAKSLSAADAEAQVAALERSHRYQQDVY
Sequences:
>Translated_589_residues MSRPNLLPRTAPFGDGERASLDAVLGTASPTQRAWLAGFLAGLDAAGGQPAAVPAAPPKAAAPLTVIYASESGNSEALAG NVAKLARKQGFKPKVVDFSDLDVATLPKAGKLIAIAATWGEGEPPARAVRAYGELMGEGAPRLDGVEFAVLSLGDTSYAE FCAIGKALDARFEALGAKRAAERADLDLDFEKPAADWIKGALKALAPAEQPDNVVAVDFARAGAGEDDEAEPSREPLVVE VVEHVNLNSSRSDKETIHLALAFEDGAPAYEPGDSLEIFPENDPQLVDEILNAAGLAGDEALRRALLAERDITTLSAATI ERFVKATGHADAQTLIDSGEAKAWVEGRHLIDLLETYPAKLTAEHIGTITRPLPPRAYSIASSRKEVGDEVHLAIAAVRY ETHGRARSGVASVHVADRIRDGAKLRVRLKPNRHFRLPQDPATDIIMVGPGTGVAPFRAFVQERRAVEAPGRSWLFFGDR HFTHDFLYQLEWQDALEDGSLTKIDVAFSRDQPEKVYVQDRITQHAQELVSWLDGGAHLYVCGDAKNMAKDVRAAVVKAY ETAKSLSAADAEAQVAALERSHRYQQDVY >Mature_588_residues SRPNLLPRTAPFGDGERASLDAVLGTASPTQRAWLAGFLAGLDAAGGQPAAVPAAPPKAAAPLTVIYASESGNSEALAGN VAKLARKQGFKPKVVDFSDLDVATLPKAGKLIAIAATWGEGEPPARAVRAYGELMGEGAPRLDGVEFAVLSLGDTSYAEF CAIGKALDARFEALGAKRAAERADLDLDFEKPAADWIKGALKALAPAEQPDNVVAVDFARAGAGEDDEAEPSREPLVVEV VEHVNLNSSRSDKETIHLALAFEDGAPAYEPGDSLEIFPENDPQLVDEILNAAGLAGDEALRRALLAERDITTLSAATIE RFVKATGHADAQTLIDSGEAKAWVEGRHLIDLLETYPAKLTAEHIGTITRPLPPRAYSIASSRKEVGDEVHLAIAAVRYE THGRARSGVASVHVADRIRDGAKLRVRLKPNRHFRLPQDPATDIIMVGPGTGVAPFRAFVQERRAVEAPGRSWLFFGDRH FTHDFLYQLEWQDALEDGSLTKIDVAFSRDQPEKVYVQDRITQHAQELVSWLDGGAHLYVCGDAKNMAKDVRAAVVKAYE TAKSLSAADAEAQVAALERSHRYQQDVY
Specific function: Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow f
COG id: COG0369
COG function: function code P; Sulfite reductase, alpha subunit (flavoprotein)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain [H]
Homologues:
Organism=Homo sapiens, GI127139033, Length=606, Percent_Identity=31.023102310231, Blast_Score=232, Evalue=7e-61, Organism=Homo sapiens, GI10835173, Length=644, Percent_Identity=27.1739130434783, Blast_Score=176, Evalue=4e-44, Organism=Homo sapiens, GI24041029, Length=605, Percent_Identity=27.603305785124, Blast_Score=173, Evalue=5e-43, Organism=Homo sapiens, GI40254422, Length=653, Percent_Identity=26.7993874425727, Blast_Score=157, Evalue=3e-38, Organism=Homo sapiens, GI169790956, Length=265, Percent_Identity=35.0943396226415, Blast_Score=142, Evalue=1e-33, Organism=Homo sapiens, GI169790958, Length=265, Percent_Identity=35.0943396226415, Blast_Score=142, Evalue=1e-33, Organism=Homo sapiens, GI7657393, Length=249, Percent_Identity=35.7429718875502, Blast_Score=137, Evalue=4e-32, Organism=Homo sapiens, GI221316705, Length=258, Percent_Identity=34.8837209302326, Blast_Score=133, Evalue=5e-31, Organism=Homo sapiens, GI221316709, Length=249, Percent_Identity=35.7429718875502, Blast_Score=132, Evalue=6e-31, Organism=Homo sapiens, GI221316707, Length=521, Percent_Identity=26.295585412668, Blast_Score=125, Evalue=1e-28, Organism=Escherichia coli, GI1789123, Length=593, Percent_Identity=38.2799325463744, Blast_Score=408, Evalue=1e-115, Organism=Caenorhabditis elegans, GI17554134, Length=592, Percent_Identity=29.5608108108108, Blast_Score=233, Evalue=3e-61, Organism=Caenorhabditis elegans, GI17566446, Length=575, Percent_Identity=24.3478260869565, Blast_Score=126, Evalue=4e-29, Organism=Caenorhabditis elegans, GI17531441, Length=260, Percent_Identity=26.5384615384615, Blast_Score=86, Evalue=6e-17, Organism=Saccharomyces cerevisiae, GI6321832, Length=637, Percent_Identity=26.2166405023548, Blast_Score=151, Evalue=3e-37, Organism=Saccharomyces cerevisiae, GI6321143, Length=392, Percent_Identity=29.8469387755102, Blast_Score=148, Evalue=3e-36, Organism=Saccharomyces cerevisiae, GI6325305, Length=633, Percent_Identity=22.2748815165877, Blast_Score=111, Evalue=3e-25, Organism=Drosophila melanogaster, GI17137192, Length=603, Percent_Identity=29.8507462686567, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI24582192, Length=516, Percent_Identity=29.6511627906977, Blast_Score=192, Evalue=4e-49, Organism=Drosophila melanogaster, GI24583543, Length=528, Percent_Identity=30.4924242424242, Blast_Score=167, Evalue=1e-41, Organism=Drosophila melanogaster, GI78706876, Length=528, Percent_Identity=30.4924242424242, Blast_Score=167, Evalue=1e-41, Organism=Drosophila melanogaster, GI78706872, Length=528, Percent_Identity=30.4924242424242, Blast_Score=167, Evalue=2e-41, Organism=Drosophila melanogaster, GI24660907, Length=602, Percent_Identity=25.2491694352159, Blast_Score=151, Evalue=1e-36, Organism=Drosophila melanogaster, GI24660903, Length=602, Percent_Identity=25.2491694352159, Blast_Score=151, Evalue=1e-36, Organism=Drosophila melanogaster, GI24647438, Length=414, Percent_Identity=22.2222222222222, Blast_Score=69, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010199 - InterPro: IPR003097 - InterPro: IPR017927 - InterPro: IPR001094 - InterPro: IPR008254 - InterPro: IPR001709 - InterPro: IPR023173 - InterPro: IPR001433 - InterPro: IPR017938 [H]
Pfam domain/function: PF00667 FAD_binding_1; PF00258 Flavodoxin_1; PF00175 NAD_binding_1 [H]
EC number: =1.8.1.2 [H]
Molecular weight: Translated: 63259; Mature: 63127
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRPNLLPRTAPFGDGERASLDAVLGTASPTQRAWLAGFLAGLDAAGGQPAAVPAAPPKA CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC AAPLTVIYASESGNSEALAGNVAKLARKQGFKPKVVDFSDLDVATLPKAGKLIAIAATWG CCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCHHCCCCCCCEEEEEEECC EGEPPARAVRAYGELMGEGAPRLDGVEFAVLSLGDTSYAEFCAIGKALDARFEALGAKRA CCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH AERADLDLDFEKPAADWIKGALKALAPAEQPDNVVAVDFARAGAGEDDEAEPSREPLVVE HHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHH VVEHVNLNSSRSDKETIHLALAFEDGAPAYEPGDSLEIFPENDPQLVDEILNAAGLAGDE HHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCHH ALRRALLAERDITTLSAATIERFVKATGHADAQTLIDSGEAKAWVEGRHLIDLLETYPAK HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEECCHHHHHHHHHHCCCH LTAEHIGTITRPLPPRAYSIASSRKEVGDEVHLAIAAVRYETHGRARSGVASVHVADRIR HHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHEEEEEEEEECCCCCCCCCCEEEEHHHHHC DGAKLRVRLKPNRHFRLPQDPATDIIMVGPGTGVAPFRAFVQERRAVEAPGRSWLFFGDR CCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCC HFTHDFLYQLEWQDALEDGSLTKIDVAFSRDQPEKVYVQDRITQHAQELVSWLDGGAHLY CCCHHHHEEEEHHHHCCCCCEEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHCCCCEEE VCGDAKNMAKDVRAAVVKAYETAKSLSAADAEAQVAALERSHRYQQDVY EECCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SRPNLLPRTAPFGDGERASLDAVLGTASPTQRAWLAGFLAGLDAAGGQPAAVPAAPPKA CCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC AAPLTVIYASESGNSEALAGNVAKLARKQGFKPKVVDFSDLDVATLPKAGKLIAIAATWG CCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCHHCCCCCCCEEEEEEECC EGEPPARAVRAYGELMGEGAPRLDGVEFAVLSLGDTSYAEFCAIGKALDARFEALGAKRA CCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH AERADLDLDFEKPAADWIKGALKALAPAEQPDNVVAVDFARAGAGEDDEAEPSREPLVVE HHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHH VVEHVNLNSSRSDKETIHLALAFEDGAPAYEPGDSLEIFPENDPQLVDEILNAAGLAGDE HHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCHH ALRRALLAERDITTLSAATIERFVKATGHADAQTLIDSGEAKAWVEGRHLIDLLETYPAK HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEECCHHHHHHHHHHCCCH LTAEHIGTITRPLPPRAYSIASSRKEVGDEVHLAIAAVRYETHGRARSGVASVHVADRIR HHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHEEEEEEEEECCCCCCCCCCEEEEHHHHHC DGAKLRVRLKPNRHFRLPQDPATDIIMVGPGTGVAPFRAFVQERRAVEAPGRSWLFFGDR CCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCC HFTHDFLYQLEWQDALEDGSLTKIDVAFSRDQPEKVYVQDRITQHAQELVSWLDGGAHLY CCCHHHHEEEEHHHHCCCCCEEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHCCCCEEE VCGDAKNMAKDVRAAVVKAYETAKSLSAADAEAQVAALERSHRYQQDVY EECCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]