| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
Click here to switch to the map view.
The map label for this gene is cysI
Identifier: 170748201
GI number: 170748201
Start: 1900041
End: 1901891
Strand: Reverse
Name: cysI
Synonym: Mrad2831_1783
Alternate gene names: 170748201
Gene position: 1901891-1900041 (Counterclockwise)
Preceding gene: 170748202
Following gene: 170748200
Centisome position: 31.29
GC content: 70.39
Gene sequence:
>1851_bases ATGGACGACCACAGCCCCCGCGACGCCGCCGAGACCCCGGCCCCCGGCCCTGCCGCCACACCGGCCAAGCGCGTCTACGA GACCCCGCCGACCTCCCGCCCGATCACGGATGCCGAGGCCGCGCGCGCGGAGAAACTCGCCGCGAACGAGCACATCAAGA TCGCCAGCGGCTACCTCCGCGGCACGCTGGCGGACGGGCTCCTGAAGCACGCCACCGGGGCGATCTCGGAGGATGACGGG CAGCTCGTGAAGTTCCACGGGATGTACCTGCAGGACGACCGCGACCTGCGCCCCGAGCGGACCAAGAAGAAGCTCGACAA GGCCTACAGCTTCATGATCCGCCTGCGCATCGCCGGCGGCGTCATCACCCCGAAGCAGTGGCTGATCCTCGACGACATCG CCCGGACCTACGCGGGCGGGGCGCTGCGCGCGACCACGCGCCAGACCTTCCAGTACCACGGCGTGATCAAGTCGAACCTG AAGCGCACGATGGCCGCCATCGACGGCGCGCTGCTCGACACGATCGCGGCCTGCGGCGACGTCAACCGCAACGTCATGGC GGCGACGAACCCGGCCCAGACCGGCGCCCACAAGGCCGCCTACCAGCTCGCCAAGGACATCTCCGACTCGCTGCTGCCGA AGACCAGCGCGTGGCGCGAGATCTGGCTCGACGGCGAGCGCGTGGTCGGCGGCGAGGACGAGGCCGAGGTCGAGCCGGTC TACGGCCGGACCTACCTGCCGCGGAAGTTCAAGACCGTCGTGGCGGTGCCGCCCTCCAACGAGGTCGACATCTTCGCCCA CGACCTCGGCTTCATCGCGATCCTCGACAAGAAGAACCAGGTCACCGGCTGGAACGTCACGGTGGGCGGCGGCATGGGCA TGACCCACGGCGAGCCCGACACCTTCCCGCGCACCGCCGACGTGATGGGCTTCGTGAAGCCCGAGGACGCCCTGAAGGTC GCGGAAGCCGTGATGACGGTCCAGCGCGACTGGGGCAACCGCAAGAACCGCAAGAACGCCCGGCTCAAGTACACGATCGA GCGCTACGGCCTCGACGCCTTCCGGGCCGAGGTGGAGAAGCGGGTCGGCAAGAAGCTCGGCGCGCCCAAGCCCTTCACCT TCACGGGCAACGGCGACCGCTACGGCTGGGTCGAGGGCGACGACGGCCGCCACCACCTGACGCTCTACGTGCCCTCGGGC CGGATCAAGGACATCGACGGCGGCCCGCAATTCCTCTCGGGTCTGCGCCGCATCGCCGAGGTCCACCAGGGCGATTTCCG CCTGACCGGCAACCAGAACGTGATCATCGCCAACGTCCCGGCCGAGAAGCGCGCCGAGATCGACGCCCTCGTCGATGAGT ACGGCCTGACCCGGGGCGCGAGCGCGCTCCGGCGCAGCTCGCTCGCCTGCGTGGCCCTGCCGACCTGCGGCCTCGCGCTG GCCGAGAGCGAGCGCTACCTGCCGGACCTGATGACCGAGCTGGAGGAGAGCCTCGCGTCCCACGGGCTCGCCGAGGAGGA GATCACGATCCGCTCCACCGGCTGCCCGAACGGATGCGCCCGGCCGTTCATCTCCGAGATCGGCCTCGTGGGCCGCGGCC CCGAGCGCTATCACCTCTATCTCGGCGCGGCCCACGACGGCTCGCGGCTGAGCAAGCTCTACAAGGAGGACGTGGCGGCC TCCGAGATCCGCGACACCCTCGACCCGCTGTTCGCCGACTACGCGAGGGGCCGGCAGCCGGGCGAGCATTTCGGCGACTA CCTGATCCGCGCCGGCCACGTAGCCCGCACCACCAACGGCCCGGACTTCCACGACCGGACCGGCGCCCTCAAGCCGGCCA CGCTCGGCTGA
Upstream 100 bases:
>100_bases CCCGAGGTCGCGGATCCGGTTCCAGTCCTGCACCGGCTTCGCTCCGCTCGCCCCCTCCCCACCGGGGAGGAAGACGCGTT CAGACAGACGGATTCACCCC
Downstream 100 bases:
>100_bases CGGCAGCCCCCGGGCGCGTCCGGGACGGGGTTCCCGGGCGCGCCGAGGCCGCCGCGGCAGGGCCGCGGATCGCGTGCTCC GGCCCCGCCTCGCCCTGACC
Product: sulfite reductase subunit beta
Products: NA
Alternate protein names: SiR-HP; SiRHP
Number of amino acids: Translated: 616; Mature: 616
Protein sequence:
>616_residues MDDHSPRDAAETPAPGPAATPAKRVYETPPTSRPITDAEAARAEKLAANEHIKIASGYLRGTLADGLLKHATGAISEDDG QLVKFHGMYLQDDRDLRPERTKKKLDKAYSFMIRLRIAGGVITPKQWLILDDIARTYAGGALRATTRQTFQYHGVIKSNL KRTMAAIDGALLDTIAACGDVNRNVMAATNPAQTGAHKAAYQLAKDISDSLLPKTSAWREIWLDGERVVGGEDEAEVEPV YGRTYLPRKFKTVVAVPPSNEVDIFAHDLGFIAILDKKNQVTGWNVTVGGGMGMTHGEPDTFPRTADVMGFVKPEDALKV AEAVMTVQRDWGNRKNRKNARLKYTIERYGLDAFRAEVEKRVGKKLGAPKPFTFTGNGDRYGWVEGDDGRHHLTLYVPSG RIKDIDGGPQFLSGLRRIAEVHQGDFRLTGNQNVIIANVPAEKRAEIDALVDEYGLTRGASALRRSSLACVALPTCGLAL AESERYLPDLMTELEESLASHGLAEEEITIRSTGCPNGCARPFISEIGLVGRGPERYHLYLGAAHDGSRLSKLYKEDVAA SEIRDTLDPLFADYARGRQPGEHFGDYLIRAGHVARTTNGPDFHDRTGALKPATLG
Sequences:
>Translated_616_residues MDDHSPRDAAETPAPGPAATPAKRVYETPPTSRPITDAEAARAEKLAANEHIKIASGYLRGTLADGLLKHATGAISEDDG QLVKFHGMYLQDDRDLRPERTKKKLDKAYSFMIRLRIAGGVITPKQWLILDDIARTYAGGALRATTRQTFQYHGVIKSNL KRTMAAIDGALLDTIAACGDVNRNVMAATNPAQTGAHKAAYQLAKDISDSLLPKTSAWREIWLDGERVVGGEDEAEVEPV YGRTYLPRKFKTVVAVPPSNEVDIFAHDLGFIAILDKKNQVTGWNVTVGGGMGMTHGEPDTFPRTADVMGFVKPEDALKV AEAVMTVQRDWGNRKNRKNARLKYTIERYGLDAFRAEVEKRVGKKLGAPKPFTFTGNGDRYGWVEGDDGRHHLTLYVPSG RIKDIDGGPQFLSGLRRIAEVHQGDFRLTGNQNVIIANVPAEKRAEIDALVDEYGLTRGASALRRSSLACVALPTCGLAL AESERYLPDLMTELEESLASHGLAEEEITIRSTGCPNGCARPFISEIGLVGRGPERYHLYLGAAHDGSRLSKLYKEDVAA SEIRDTLDPLFADYARGRQPGEHFGDYLIRAGHVARTTNGPDFHDRTGALKPATLG >Mature_616_residues MDDHSPRDAAETPAPGPAATPAKRVYETPPTSRPITDAEAARAEKLAANEHIKIASGYLRGTLADGLLKHATGAISEDDG QLVKFHGMYLQDDRDLRPERTKKKLDKAYSFMIRLRIAGGVITPKQWLILDDIARTYAGGALRATTRQTFQYHGVIKSNL KRTMAAIDGALLDTIAACGDVNRNVMAATNPAQTGAHKAAYQLAKDISDSLLPKTSAWREIWLDGERVVGGEDEAEVEPV YGRTYLPRKFKTVVAVPPSNEVDIFAHDLGFIAILDKKNQVTGWNVTVGGGMGMTHGEPDTFPRTADVMGFVKPEDALKV AEAVMTVQRDWGNRKNRKNARLKYTIERYGLDAFRAEVEKRVGKKLGAPKPFTFTGNGDRYGWVEGDDGRHHLTLYVPSG RIKDIDGGPQFLSGLRRIAEVHQGDFRLTGNQNVIIANVPAEKRAEIDALVDEYGLTRGASALRRSSLACVALPTCGLAL AESERYLPDLMTELEESLASHGLAEEEITIRSTGCPNGCARPFISEIGLVGRGPERYHLYLGAAHDGSRLSKLYKEDVAA SEIRDTLDPLFADYARGRQPGEHFGDYLIRAGHVARTTNGPDFHDRTGALKPATLG
Specific function: Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate
COG id: COG0155
COG function: function code P; Sulfite reductase, beta subunit (hemoprotein)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
Homologues:
Organism=Escherichia coli, GI1789122, Length=551, Percent_Identity=46.8239564428312, Blast_Score=546, Evalue=1e-156, Organism=Saccharomyces cerevisiae, GI6322597, Length=591, Percent_Identity=45.3468697123519, Blast_Score=550, Evalue=1e-157,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): CYSI_METRJ (B1LS97)
Other databases:
- EMBL: CP001001 - RefSeq: YP_001754461.1 - ProteinModelPortal: B1LS97 - SMR: B1LS97 - GeneID: 6137812 - GenomeReviews: CP001001_GR - KEGG: mrd:Mrad2831_1783 - HOGENOM: HBG626671 - OMA: TRQAFQM - ProtClustDB: PRK13504 - HAMAP: MF_01540 - InterPro: IPR011786 - InterPro: IPR005117 - InterPro: IPR006067 - InterPro: IPR006066 - PRINTS: PR00397 - TIGRFAMs: TIGR02041
Pfam domain/function: PF01077 NIR_SIR; PF03460 NIR_SIR_ferr; SSF55124 NiR_SiRalpha_1/3
EC number: =1.8.1.2
Molecular weight: Translated: 67333; Mature: 67333
Theoretical pI: Translated: 7.49; Mature: 7.49
Prosite motif: PS00365 NIR_SIR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDHSPRDAAETPAPGPAATPAKRVYETPPTSRPITDAEAARAEKLAANEHIKIASGYLR CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECHHHH GTLADGLLKHATGAISEDDGQLVKFHGMYLQDDRDLRPERTKKKLDKAYSFMIRLRIAGG HHHHHHHHHHHCCCCCCCCCCEEEEECEEEECCCCCCHHHHHHHHHHHHHHHEEEEECCC VITPKQWLILDDIARTYAGGALRATTRQTFQYHGVIKSNLKRTMAAIDGALLDTIAACGD CCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VNRNVMAATNPAQTGAHKAAYQLAKDISDSLLPKTSAWREIWLDGERVVGGEDEAEVEPV CCCCEEEECCCHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHEECCCEEECCCCCCCCCCC YGRTYLPRKFKTVVAVPPSNEVDIFAHDLGFIAILDKKNQVTGWNVTVGGGMGMTHGEPD CCCCCCCCCEEEEEEECCCCCCEEEEECCCEEEEEECCCCCCCEEEEECCCCCCCCCCCC TFPRTADVMGFVKPEDALKVAEAVMTVQRDWGNRKNRKNARLKYTIERYGLDAFRAEVEK CCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHCHHHHHHHHHH RVGKKLGAPKPFTFTGNGDRYGWVEGDDGRHHLTLYVPSGRIKDIDGGPQFLSGLRRIAE HHHHHCCCCCCEEECCCCCEECCCCCCCCCEEEEEEECCCCEECCCCCHHHHHHHHHHHH VHQGDFRLTGNQNVIIANVPAEKRAEIDALVDEYGLTRGASALRRSSLACVALPTCGLAL HHCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCCCHH AESERYLPDLMTELEESLASHGLAEEEITIRSTGCPNGCARPFISEIGLVGRGPERYHLY HCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCEEEEE LGAAHDGSRLSKLYKEDVAASEIRDTLDPLFADYARGRQPGEHFGDYLIRAGHVARTTNG EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEECCCC PDFHDRTGALKPATLG CCCCCCCCCCCCCCCC >Mature Secondary Structure MDDHSPRDAAETPAPGPAATPAKRVYETPPTSRPITDAEAARAEKLAANEHIKIASGYLR CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECHHHH GTLADGLLKHATGAISEDDGQLVKFHGMYLQDDRDLRPERTKKKLDKAYSFMIRLRIAGG HHHHHHHHHHHCCCCCCCCCCEEEEECEEEECCCCCCHHHHHHHHHHHHHHHEEEEECCC VITPKQWLILDDIARTYAGGALRATTRQTFQYHGVIKSNLKRTMAAIDGALLDTIAACGD CCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VNRNVMAATNPAQTGAHKAAYQLAKDISDSLLPKTSAWREIWLDGERVVGGEDEAEVEPV CCCCEEEECCCHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHEECCCEEECCCCCCCCCCC YGRTYLPRKFKTVVAVPPSNEVDIFAHDLGFIAILDKKNQVTGWNVTVGGGMGMTHGEPD CCCCCCCCCEEEEEEECCCCCCEEEEECCCEEEEEECCCCCCCEEEEECCCCCCCCCCCC TFPRTADVMGFVKPEDALKVAEAVMTVQRDWGNRKNRKNARLKYTIERYGLDAFRAEVEK CCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHCHHHHHHHHHH RVGKKLGAPKPFTFTGNGDRYGWVEGDDGRHHLTLYVPSGRIKDIDGGPQFLSGLRRIAE HHHHHCCCCCCEEECCCCCEECCCCCCCCCEEEEEEECCCCEECCCCCHHHHHHHHHHHH VHQGDFRLTGNQNVIIANVPAEKRAEIDALVDEYGLTRGASALRRSSLACVALPTCGLAL HHCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCCCHH AESERYLPDLMTELEESLASHGLAEEEITIRSTGCPNGCARPFISEIGLVGRGPERYHLY HCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCEEEEE LGAAHDGSRLSKLYKEDVAASEIRDTLDPLFADYARGRQPGEHFGDYLIRAGHVARTTNG EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEECCCC PDFHDRTGALKPATLG CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA