Click here to switch to the map view.

The map label for this gene is omp31 [H]

Identifier: 170748188

GI number: 170748188

Start: 1883209

End: 1884924

Strand: Reverse

Name: omp31 [H]

Synonym: Mrad2831_1770

Alternate gene names: 170748188

Gene position: 1884924-1883209 (Counterclockwise)

Preceding gene: 170748191

Following gene: 170748186

Centisome position: 31.01

GC content: 71.45

Gene sequence:

>1716_bases
ATGTATCGCATCTCGAGTTCCGGACTTCTCCTGTGCCTGCTGTCGCAGACCGCGATGGCGGCGGACCTCCCGCGGAGGGC
CCTTCCGCCGGCGGCGACGGCCGTGCCGATCTTCTCCTGGACCGGAGCGCATGCCGGCCTGTTCGCCGGTTACGGGACCC
TCGATCGGGCCACGCAGTTCGTCTGCACAGGTCCGGACGGGCAGCCCGGAGCCCGGAACTGCCCGGTCATTCCATCGAAG
CGGGCCTCGGACGGGAGCTTCGTCGGCGGCGCCGAGGTCGGCTACGATTGGCAGGTGAATTCCGGCTTCGTCGCCGGCGC
CGCCGCGGATTACCAATTCACCCGGCTGTGGGGCTACGATCGCCGCGAAGGCGCCTTTCCGGCCGCGGGCGGCGGCTTCT
ATCGCCGCAGCGTCGCCCATTCCGGCCAGAGGCTGGACGAGCTCGCCACCCTGCGCGGCAGGATCGGCTTCGCCGTCGAT
CGCACCCTCGTCTACGCCACGGGCGGCCTCGCCGCGGGCACGGTCCGGACCGACAACAACCTGTCGCTGGCCGGTTTCCC
GCTGTTCGACAGGCGCCAGGGCGCGGTGCGCCTGGGCTACGTGGCCGGTGCCGGCATCGAGCACGCCTTCAGCGAGCACC
TCTCCGCCAAGGTCGAGGGTCTCTACTACGATCTCGGCTCCCGGGCGGTCCTCCCGGCTCCGTCGTACCCCGTGCTGACC
GGCTACCACGCCGGCACGCGGGTCGCGACGGACGGCTTCCTGGCCCGCGTCGGCCTCAATTACCGGTTCGGAGCCGGGCT
GCCCGACCTGCCGCCGGTCGCGCTGGCCGGCCCGGCGACCTGGGATTTCGAGGGCGGCCTGCGCTACTTCTTCAGCGCCG
GGACCCCGCGCGAGAAGCTCGGCGACCCCGACGCGCCGGGCCAGCTCAACTCCCGCCTGACCTACGCCAACGCCCAGGCG
CATGCCGGCGAGAGCTTCGCCCGGCTCGAGCACAACCCCACCGGCCTGTTCGCCAAGGGCTTCCTCGGCTCGGGCGGCGT
CACCGGCGGCCGCCTCGCCGACGAGGACTTCCCGCCCGCCCTGCGCCGCTATTCGAAGACGCTGTCGCCGATCAAGGACG
GCGACAGCGGCTACGGCGTGATCGATCTCGGCTACGACGTGCTGCGCCGGGACGGGTACAAGCTCGGCGGCTTCCTCGGC
TACCAGTTCGCGTCCGAACTGTATAACGGCTACGGCTGCCGTCAGGTGGCGGGCGGGACTCCCTGCGCCAGACCCTACCC
GACCAGCATGAAGACGCTGGGCGAGAGCATGCAGTGGAACGCGCTGCGCGTCGGCGTGATCGGCGAGGCGCGGTTCGACC
GGGTCCGGCTGAGCCTGGAAGGCGCCTACCTGCCGGTCGTGAGCCTGAGCGGCGTCGACCGGCACTGGCTGCGGCCCGAC
ATCAACCCGGGGCCGGAAGGCGGCCGCGGCGACGGCTACTTCCTGGAGGGGATCATCTCGTACGACCTGACGCCGTCCGT
CAGCGTCGGCGTCGGCGGCCGCTACTGGCAGCTCCAGGCCGACAAGGCGCACACGACGGCCTTCCCGTTCTCGCCGCCCA
GCCCGATGAAGTTCGAGACCGGTCGCTACGGCGGGTTCGCGCAGCTCTCCTACCGGCTGGCCGATTTCGGCTTCGGCGAG
ACAGGCGCTCCGGCGGCCCCGATCCGCAAGGACTGA

Upstream 100 bases:

>100_bases
CGCGCGAGATCAGCAGAAGCTCCACTTCGGCATCCGAATCCTTACCGACGAAGAGACCTTGACGCTCATGCCTTCGACGA
CGCGTGGCGGGGGACACTAC

Downstream 100 bases:

>100_bases
TCCAGCCGCCACCCCGCGCCCGAACGCCGGCGCGGCCGGTCAGGGGACGGGCCGCGCCGGCCGTTCGATCCCGGTGCCGT
GATCCCGGTGCCGCGATCCC

Product: putative outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 571; Mature: 571

Protein sequence:

>571_residues
MYRISSSGLLLCLLSQTAMAADLPRRALPPAATAVPIFSWTGAHAGLFAGYGTLDRATQFVCTGPDGQPGARNCPVIPSK
RASDGSFVGGAEVGYDWQVNSGFVAGAAADYQFTRLWGYDRREGAFPAAGGGFYRRSVAHSGQRLDELATLRGRIGFAVD
RTLVYATGGLAAGTVRTDNNLSLAGFPLFDRRQGAVRLGYVAGAGIEHAFSEHLSAKVEGLYYDLGSRAVLPAPSYPVLT
GYHAGTRVATDGFLARVGLNYRFGAGLPDLPPVALAGPATWDFEGGLRYFFSAGTPREKLGDPDAPGQLNSRLTYANAQA
HAGESFARLEHNPTGLFAKGFLGSGGVTGGRLADEDFPPALRRYSKTLSPIKDGDSGYGVIDLGYDVLRRDGYKLGGFLG
YQFASELYNGYGCRQVAGGTPCARPYPTSMKTLGESMQWNALRVGVIGEARFDRVRLSLEGAYLPVVSLSGVDRHWLRPD
INPGPEGGRGDGYFLEGIISYDLTPSVSVGVGGRYWQLQADKAHTTAFPFSPPSPMKFETGRYGGFAQLSYRLADFGFGE
TGAPAAPIRKD

Sequences:

>Translated_571_residues
MYRISSSGLLLCLLSQTAMAADLPRRALPPAATAVPIFSWTGAHAGLFAGYGTLDRATQFVCTGPDGQPGARNCPVIPSK
RASDGSFVGGAEVGYDWQVNSGFVAGAAADYQFTRLWGYDRREGAFPAAGGGFYRRSVAHSGQRLDELATLRGRIGFAVD
RTLVYATGGLAAGTVRTDNNLSLAGFPLFDRRQGAVRLGYVAGAGIEHAFSEHLSAKVEGLYYDLGSRAVLPAPSYPVLT
GYHAGTRVATDGFLARVGLNYRFGAGLPDLPPVALAGPATWDFEGGLRYFFSAGTPREKLGDPDAPGQLNSRLTYANAQA
HAGESFARLEHNPTGLFAKGFLGSGGVTGGRLADEDFPPALRRYSKTLSPIKDGDSGYGVIDLGYDVLRRDGYKLGGFLG
YQFASELYNGYGCRQVAGGTPCARPYPTSMKTLGESMQWNALRVGVIGEARFDRVRLSLEGAYLPVVSLSGVDRHWLRPD
INPGPEGGRGDGYFLEGIISYDLTPSVSVGVGGRYWQLQADKAHTTAFPFSPPSPMKFETGRYGGFAQLSYRLADFGFGE
TGAPAAPIRKD
>Mature_571_residues
MYRISSSGLLLCLLSQTAMAADLPRRALPPAATAVPIFSWTGAHAGLFAGYGTLDRATQFVCTGPDGQPGARNCPVIPSK
RASDGSFVGGAEVGYDWQVNSGFVAGAAADYQFTRLWGYDRREGAFPAAGGGFYRRSVAHSGQRLDELATLRGRIGFAVD
RTLVYATGGLAAGTVRTDNNLSLAGFPLFDRRQGAVRLGYVAGAGIEHAFSEHLSAKVEGLYYDLGSRAVLPAPSYPVLT
GYHAGTRVATDGFLARVGLNYRFGAGLPDLPPVALAGPATWDFEGGLRYFFSAGTPREKLGDPDAPGQLNSRLTYANAQA
HAGESFARLEHNPTGLFAKGFLGSGGVTGGRLADEDFPPALRRYSKTLSPIKDGDSGYGVIDLGYDVLRRDGYKLGGFLG
YQFASELYNGYGCRQVAGGTPCARPYPTSMKTLGESMQWNALRVGVIGEARFDRVRLSLEGAYLPVVSLSGVDRHWLRPD
INPGPEGGRGDGYFLEGIISYDLTPSVSVGVGGRYWQLQADKAHTTAFPFSPPSPMKFETGRYGGFAQLSYRLADFGFGE
TGAPAAPIRKD

Specific function: Major outer membrane protein associated with peptidoglycans. May function as a porin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the omp25/ropB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017690
- InterPro:   IPR011250
- InterPro:   IPR000498 [H]

Pfam domain/function: PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 60795; Mature: 60795

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRISSSGLLLCLLSQTAMAADLPRRALPPAATAVPIFSWTGAHAGLFAGYGTLDRATQF
CEEECCCCEEEEEEHHHHHHHHCCHHCCCCCCCEEEEEEECCCCCHHHHCCCCHHHCCEE
VCTGPDGQPGARNCPVIPSKRASDGSFVGGAEVGYDWQVNSGFVAGAAADYQFTRLWGYD
EEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEECCCEEEECCCCCEEEEECCCC
RREGAFPAAGGGFYRRSVAHSGQRLDELATLRGRIGFAVDRTLVYATGGLAAGTVRTDNN
CCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHCCCEEEEEEEEEEECCCEECEEEECCC
LSLAGFPLFDRRQGAVRLGYVAGAGIEHAFSEHLSAKVEGLYYDLGSRAVLPAPSYPVLT
CEEECCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCEEEEECCCCEECCCCCCCEEE
GYHAGTRVATDGFLARVGLNYRFGAGLPDLPPVALAGPATWDFEGGLRYFFSAGTPREKL
CCCCCCEEECCCEEEEECCCEEECCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCHHHC
GDPDAPGQLNSRLTYANAQAHAGESFARLEHNPTGLFAKGFLGSGGVTGGRLADEDFPPA
CCCCCCCCCCCEEEEECCHHHCCCHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCHH
LRRYSKTLSPIKDGDSGYGVIDLGYDVLRRDGYKLGGFLGYQFASELYNGYGCRQVAGGT
HHHHHHHHCCCCCCCCCCEEEECCHHHHHCCCCEECHHHHHHHHHHHHCCCCCEECCCCC
PCARPYPTSMKTLGESMQWNALRVGVIGEARFDRVRLSLEGAYLPVVSLSGVDRHWLRPD
CCCCCCCCHHHHHCCCCCCCEEEEEEECCCCEEEEEEEECCCEEEEEEECCCCHHCCCCC
INPGPEGGRGDGYFLEGIISYDLTPSVSVGVGGRYWQLQADKAHTTAFPFSPPSPMKFET
CCCCCCCCCCCCEEEEEEEEECCCCCEEECCCCEEEEEECCCCCCEECCCCCCCCCEECC
GRYGGFAQLSYRLADFGFGETGAPAAPIRKD
CCCCCCHHEEEEHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MYRISSSGLLLCLLSQTAMAADLPRRALPPAATAVPIFSWTGAHAGLFAGYGTLDRATQF
CEEECCCCEEEEEEHHHHHHHHCCHHCCCCCCCEEEEEEECCCCCHHHHCCCCHHHCCEE
VCTGPDGQPGARNCPVIPSKRASDGSFVGGAEVGYDWQVNSGFVAGAAADYQFTRLWGYD
EEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEECCCEEEECCCCCEEEEECCCC
RREGAFPAAGGGFYRRSVAHSGQRLDELATLRGRIGFAVDRTLVYATGGLAAGTVRTDNN
CCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHCCCEEEEEEEEEEECCCEECEEEECCC
LSLAGFPLFDRRQGAVRLGYVAGAGIEHAFSEHLSAKVEGLYYDLGSRAVLPAPSYPVLT
CEEECCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCEEEEECCCCEECCCCCCCEEE
GYHAGTRVATDGFLARVGLNYRFGAGLPDLPPVALAGPATWDFEGGLRYFFSAGTPREKL
CCCCCCEEECCCEEEEECCCEEECCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCHHHC
GDPDAPGQLNSRLTYANAQAHAGESFARLEHNPTGLFAKGFLGSGGVTGGRLADEDFPPA
CCCCCCCCCCCEEEEECCHHHCCCHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCHH
LRRYSKTLSPIKDGDSGYGVIDLGYDVLRRDGYKLGGFLGYQFASELYNGYGCRQVAGGT
HHHHHHHHCCCCCCCCCCEEEECCHHHHHCCCCEECHHHHHHHHHHHHCCCCCEECCCCC
PCARPYPTSMKTLGESMQWNALRVGVIGEARFDRVRLSLEGAYLPVVSLSGVDRHWLRPD
CCCCCCCCHHHHHCCCCCCCEEEEEEECCCCEEEEEEEECCCEEEEEEECCCCHHCCCCC
INPGPEGGRGDGYFLEGIISYDLTPSVSVGVGGRYWQLQADKAHTTAFPFSPPSPMKFET
CCCCCCCCCCCCEEEEEEEEECCCCCEEECCCCEEEEEECCCCCCEECCCCCCCCCEECC
GRYGGFAQLSYRLADFGFGETGAPAAPIRKD
CCCCCCHHEEEEHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8751924; 11756688 [H]