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The map label for this gene is ydeP [H]

Identifier: 170747982

GI number: 170747982

Start: 1648988

End: 1649347

Strand: Reverse

Name: ydeP [H]

Synonym: Mrad2831_1564

Alternate gene names: 170747982

Gene position: 1649347-1648988 (Counterclockwise)

Preceding gene: 170747985

Following gene: 170747981

Centisome position: 27.14

GC content: 68.06

Gene sequence:

>360_bases
ATGCCCCGCACCCGCCGCCACACGGGGGCCTGCAGCCCCGGCTGCGCCGTCGAGGCGACGCTCCGGCTCATCGACGGCAA
GTGGAAGGGCGTGATCCTCTATCACCTGCTGGAGGGGACCCTGCGGTTCAACGAGATCCGGCGGCGCCTCGCCAGCGTGA
CCCAGCGCATGCTCACGAACCAGTTGCGCGAAATGGAAGCCGACGGCCTGATCACCCGGACGGTCTATGCCGAGGTTCCC
CCGAAGGTCGAATACAGCCTGACCGAGCGGGGGCGGTCCCTCGAGCCGGTCATCCGCGCGCTGAAGACCTGGGGAGATCT
GCACGTCGAATTGGCAGATGCGGCCCAAAACGCCGCCTGA

Upstream 100 bases:

>100_bases
CCTCGGGCTGTCGCCGCAGGAGATGCCGCCCGCCTTCACGGGCCGCAAGTACGCACATAAAACGCCGCTAGTGCCGGAAA
CGATACCGTCGGAGACGCCC

Downstream 100 bases:

>100_bases
TTGGGCAGACCGGTCCCGGATCCGCGCGAGACCCATAACCGGATTTTTATGACTTGGCCGGAAGGTGGCGCGTCTCCTGC
CGGACGGTTCCAGATCTTCC

Product: HxlR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 118

Protein sequence:

>119_residues
MPRTRRHTGACSPGCAVEATLRLIDGKWKGVILYHLLEGTLRFNEIRRRLASVTQRMLTNQLREMEADGLITRTVYAEVP
PKVEYSLTERGRSLEPVIRALKTWGDLHVELADAAQNAA

Sequences:

>Translated_119_residues
MPRTRRHTGACSPGCAVEATLRLIDGKWKGVILYHLLEGTLRFNEIRRRLASVTQRMLTNQLREMEADGLITRTVYAEVP
PKVEYSLTERGRSLEPVIRALKTWGDLHVELADAAQNAA
>Mature_118_residues
PRTRRHTGACSPGCAVEATLRLIDGKWKGVILYHLLEGTLRFNEIRRRLASVTQRMLTNQLREMEADGLITRTVYAEVPP
KVEYSLTERGRSLEPVIRALKTWGDLHVELADAAQNAA

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=95, Percent_Identity=37.8947368421053, Blast_Score=78, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 13427; Mature: 13296

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRTRRHTGACSPGCAVEATLRLIDGKWKGVILYHLLEGTLRFNEIRRRLASVTQRMLTN
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLREMEADGLITRTVYAEVPPKVEYSLTERGRSLEPVIRALKTWGDLHVELADAAQNAA
HHHHHCCCCCEEEEEEECCCCCCEEHHHHCCCCHHHHHHHHHHHHHHEEHHHHHCCCCC
>Mature Secondary Structure 
PRTRRHTGACSPGCAVEATLRLIDGKWKGVILYHLLEGTLRFNEIRRRLASVTQRMLTN
CCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLREMEADGLITRTVYAEVPPKVEYSLTERGRSLEPVIRALKTWGDLHVELADAAQNAA
HHHHHCCCCCEEEEEEECCCCCCEEHHHHCCCCHHHHHHHHHHHHHHEEHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]