| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is ybjJ [C]
Identifier: 170747985
GI number: 170747985
Start: 1650911
End: 1652089
Strand: Reverse
Name: ybjJ [C]
Synonym: Mrad2831_1567
Alternate gene names: 170747985
Gene position: 1652089-1650911 (Counterclockwise)
Preceding gene: 170747993
Following gene: 170747982
Centisome position: 27.18
GC content: 77.01
Gene sequence:
>1179_bases ATGCCAGCACTCGACCTGACCGATCCGGTCGCCATCCCGGGGGCCGACGACCGGGCCGCGGCCCGGCAGAGGCTGTCCAC GCGGCTGCTGTTCCTGATCGTCGGCATCGCCAACGCCACCTGGGCGCCGCTGGTGCCGCTGGTGAAGGACCGCGCCGGCC TCGACGCGGCGGGGCTCGGCCTGCTGCTCCTCACCTTCGGCATCGGCTCGATCCTGGCGATGCCGAGCGCCGGGGTGGCG GCCGCGCGGCTCGGCTTCCGGCCGGTCCTGCTCGCCGGCACGCTGGCCCTCGGCCTCGCCCTCCCGGTGCTGGCCGCGGC CTCGGGGCTCGTGACGCTCACCCTGGGGCTGCTGCTGTTCGGGGCCGGGATGGGGGCGGTGGACTGCGTCATGAACCTGC AGGCGGTCGCGGTGGAGCGCCGGAGCGGGCACCCGATGATGTCGGGCTTCCACGGCCTCTACAGCCTCGGCTGCATCCTG GGGGCGCTGATCGCCAGCGGCCTGCTGGCGGCGGGCCTCGGCGCGGGCTGGAGCGTGCTGCTCCTGACCGCCGGCATCGC GGCCCTGTTCGCCGCCGCCTGGCCCGGCATCCTGCCGCCGGACAGGGGAGGGGCGCGCGGCGGCCCCGCCTTCGCGCTGC CCCGCGGCCCGGTGCTGGTCCTGGGCCTGCTCTGCTTCGTGGTGTTCCTCACCGAGGGCTCGGCCCTCGACTGGAGCGCG GTCTTCCTGATCCAGCAGCGGGGGCTCGATCCGGCCTGGGCGGCGCTCGGCTACGCGGCCTTCTCGGTGACGATGACGGT CGGCCGGCTCGCGGGCGACCGGGTCGTGGCCCGGCTCGGGCGCCGGAGCGTGGTCGTCCTCGGCGGCCTGCTGGCGGCCG TCGGCCTCGCGCTCTCGGTCCTCGTCCCGGCCTGGGAGGCGGCACTCGCCGGCTACGCGCTGGTCGGGGCGGGCTGCGCC AACATCGTCCCGGTCCTGTTCACGGCGGCCGGCCGCCAGAGGGCGATGGCCGCGCGCGTGGCGGTGCCGGCGGTGACGAC GCTGGGCTATGCCGGGGTGCTGGCGGGCCCGGCCCTGATCGGCTTCGCCGCGCAGGCGCTCGGCCTTCCCGCGGCGCTCC TGATCGTGGCGGTCCTGCTCGTCGGCGTGGCGGCGGCCGGGCGCTCCCTGCGGGTCTGA
Upstream 100 bases:
>100_bases TCGATTCGCCAAACCTTGGCCCACCTTCGGTGTTGCACCGCGGGAGTTGAGATCCACATCGCCCAATCCCGCCCACAGAT CCAAGTCCCGACAGGCATCG
Downstream 100 bases:
>100_bases CCTCAACCCTCCGCGTTGCGCGCCATGAAGCTGGCCGGCGTCCCGTCCTCCGGGTTCACGAAGATGATGTCGGTCGGCGC CCGGCGGGGCGTGTCGATCG
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MPALDLTDPVAIPGADDRAAARQRLSTRLLFLIVGIANATWAPLVPLVKDRAGLDAAGLGLLLLTFGIGSILAMPSAGVA AARLGFRPVLLAGTLALGLALPVLAAASGLVTLTLGLLLFGAGMGAVDCVMNLQAVAVERRSGHPMMSGFHGLYSLGCIL GALIASGLLAAGLGAGWSVLLLTAGIAALFAAAWPGILPPDRGGARGGPAFALPRGPVLVLGLLCFVVFLTEGSALDWSA VFLIQQRGLDPAWAALGYAAFSVTMTVGRLAGDRVVARLGRRSVVVLGGLLAAVGLALSVLVPAWEAALAGYALVGAGCA NIVPVLFTAAGRQRAMAARVAVPAVTTLGYAGVLAGPALIGFAAQALGLPAALLIVAVLLVGVAAAGRSLRV
Sequences:
>Translated_392_residues MPALDLTDPVAIPGADDRAAARQRLSTRLLFLIVGIANATWAPLVPLVKDRAGLDAAGLGLLLLTFGIGSILAMPSAGVA AARLGFRPVLLAGTLALGLALPVLAAASGLVTLTLGLLLFGAGMGAVDCVMNLQAVAVERRSGHPMMSGFHGLYSLGCIL GALIASGLLAAGLGAGWSVLLLTAGIAALFAAAWPGILPPDRGGARGGPAFALPRGPVLVLGLLCFVVFLTEGSALDWSA VFLIQQRGLDPAWAALGYAAFSVTMTVGRLAGDRVVARLGRRSVVVLGGLLAAVGLALSVLVPAWEAALAGYALVGAGCA NIVPVLFTAAGRQRAMAARVAVPAVTTLGYAGVLAGPALIGFAAQALGLPAALLIVAVLLVGVAAAGRSLRV >Mature_391_residues PALDLTDPVAIPGADDRAAARQRLSTRLLFLIVGIANATWAPLVPLVKDRAGLDAAGLGLLLLTFGIGSILAMPSAGVAA ARLGFRPVLLAGTLALGLALPVLAAASGLVTLTLGLLLFGAGMGAVDCVMNLQAVAVERRSGHPMMSGFHGLYSLGCILG ALIASGLLAAGLGAGWSVLLLTAGIAALFAAAWPGILPPDRGGARGGPAFALPRGPVLVLGLLCFVVFLTEGSALDWSAV FLIQQRGLDPAWAALGYAAFSVTMTVGRLAGDRVVARLGRRSVVVLGGLLAAVGLALSVLVPAWEAALAGYALVGAGCAN IVPVLFTAAGRQRAMAARVAVPAVTTLGYAGVLAGPALIGFAAQALGLPAALLIVAVLLVGVAAAGRSLRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI1787068, Length=384, Percent_Identity=29.6875, Blast_Score=123, Evalue=2e-29,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 39020; Mature: 38889
Theoretical pI: Translated: 11.05; Mature: 11.05
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPALDLTDPVAIPGADDRAAARQRLSTRLLFLIVGIANATWAPLVPLVKDRAGLDAAGLG CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHH LLLLTFGIGSILAMPSAGVAAARLGFRPVLLAGTLALGLALPVLAAASGLVTLTLGLLLF HHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAGMGAVDCVMNLQAVAVERRSGHPMMSGFHGLYSLGCILGALIASGLLAAGLGAGWSVL HCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LLTAGIAALFAAAWPGILPPDRGGARGGPAFALPRGPVLVLGLLCFVVFLTEGSALDWSA HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHH VFLIQQRGLDPAWAALGYAAFSVTMTVGRLAGDRVVARLGRRSVVVLGGLLAAVGLALSV HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LVPAWEAALAGYALVGAGCANIVPVLFTAAGRQRAMAARVAVPAVTTLGYAGVLAGPALI HHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFAAQALGLPAALLIVAVLLVGVAAAGRSLRV HHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PALDLTDPVAIPGADDRAAARQRLSTRLLFLIVGIANATWAPLVPLVKDRAGLDAAGLG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHH LLLLTFGIGSILAMPSAGVAAARLGFRPVLLAGTLALGLALPVLAAASGLVTLTLGLLLF HHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAGMGAVDCVMNLQAVAVERRSGHPMMSGFHGLYSLGCILGALIASGLLAAGLGAGWSVL HCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LLTAGIAALFAAAWPGILPPDRGGARGGPAFALPRGPVLVLGLLCFVVFLTEGSALDWSA HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHH VFLIQQRGLDPAWAALGYAAFSVTMTVGRLAGDRVVARLGRRSVVVLGGLLAAVGLALSV HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LVPAWEAALAGYALVGAGCANIVPVLFTAAGRQRAMAARVAVPAVTTLGYAGVLAGPALI HHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFAAQALGLPAALLIVAVLLVGVAAAGRSLRV HHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]