| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yjhH [H]
Identifier: 170747946
GI number: 170747946
Start: 1609791
End: 1610726
Strand: Reverse
Name: yjhH [H]
Synonym: Mrad2831_1528
Alternate gene names: 170747946
Gene position: 1610726-1609791 (Counterclockwise)
Preceding gene: 170747947
Following gene: 170747943
Centisome position: 26.5
GC content: 72.01
Gene sequence:
>936_bases ATGCCTCTCACCAGCGACATCGGCGGCGTCGTCCCGATCGCGCCGACGCCGTTCCATCCGGACGGCCGGATCGACGAGGT CTCCCTCGACCGGATGACCGACTTCTTCGGGGCGGCCGGCGTCGACGGCCTGACGATCCTCGGCCAGCTCGGCGAGGCCG GCAAGCTCGACCACGCGGAGGGGATCGCGGTGGCGCGGCGCGTCCTCGGGCGCACCCGGCTGCCGGTGATCGTCGGCGTC ACGGCGCCGGGCTTCGCGGCCATGCGGGCGCTCGCCCGGGAGGTGATGGAGCTGGGCGCGGCCGGCGTGATGATCGCGCC GCCCAACACGCTCCGCACCGACGACCAGGTGGTCGGCTATTTTCGGAATGCCGCCGAGGCCGTGGGCCCGGACGTGCCCT TCGTGCTTCAGGACTACCCCCTCACCTTCTCGGTCCAGATGACCCCCGGCGTGATCCGCCGGATCGTGTCCGAGAACCCC TCCTGCGTGATGCTCAAGCACGAGGACTGGCCGGGCCTGGAGAAGATCTCCACGCTGCGCGGCTTCGAGGCGGACGGCTC GATGCGCCACATCTCCATCCTCGTGGGCAATGGCGGCCTGTTCCTCGACTTCGAGACCGAGCGCGGCGCCGACGGGGCCA ATACCGGCTACGCCTTCCCGGAGATGCTGGTCGACGTGGTCCGCCTCGGCCGGGCGGGGCAGCGCGACGCTGCCCACGAC CTGTTCGACGCCCACCTCCCCTATCTCCGCTACGAGCAGCAGCAGGGCCCGCTGGGGCTCGCGGTGCGCAAATACGTGTT CATGCGCCGGGGGATCTTCGCGTCCGACGCGCAGCGCAAGCCGTCGCAGGCGCTGACCGCGCAGGCGAAGGCCGAGGTCG AGTACCTGCTGGCCCGCCTCGCCCGCACCGACGCGCGGGCCCGGCTCGCGGCCTAG
Upstream 100 bases:
>100_bases CCGATCCCGTCCCGGGCGCGTCGCGTCGCCCGGGATTTTTTAGTATGGGGCATGCCACCCGGCGGCCGGCGGCCGCCGCA GCAGCAGCGCGGAGACCGGC
Downstream 100 bases:
>100_bases ACCGCCGCCCCGGCCGGAAGGGCCGGGGCCTCGCCGAAGCCGCCGCAGCGCCCGCTTCGGCGGCCGGCCGGCGCGCGACG GCTCACTCCAGCCTGAAGGC
Product: dihydrodipicolinate synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MPLTSDIGGVVPIAPTPFHPDGRIDEVSLDRMTDFFGAAGVDGLTILGQLGEAGKLDHAEGIAVARRVLGRTRLPVIVGV TAPGFAAMRALAREVMELGAAGVMIAPPNTLRTDDQVVGYFRNAAEAVGPDVPFVLQDYPLTFSVQMTPGVIRRIVSENP SCVMLKHEDWPGLEKISTLRGFEADGSMRHISILVGNGGLFLDFETERGADGANTGYAFPEMLVDVVRLGRAGQRDAAHD LFDAHLPYLRYEQQQGPLGLAVRKYVFMRRGIFASDAQRKPSQALTAQAKAEVEYLLARLARTDARARLAA
Sequences:
>Translated_311_residues MPLTSDIGGVVPIAPTPFHPDGRIDEVSLDRMTDFFGAAGVDGLTILGQLGEAGKLDHAEGIAVARRVLGRTRLPVIVGV TAPGFAAMRALAREVMELGAAGVMIAPPNTLRTDDQVVGYFRNAAEAVGPDVPFVLQDYPLTFSVQMTPGVIRRIVSENP SCVMLKHEDWPGLEKISTLRGFEADGSMRHISILVGNGGLFLDFETERGADGANTGYAFPEMLVDVVRLGRAGQRDAAHD LFDAHLPYLRYEQQQGPLGLAVRKYVFMRRGIFASDAQRKPSQALTAQAKAEVEYLLARLARTDARARLAA >Mature_310_residues PLTSDIGGVVPIAPTPFHPDGRIDEVSLDRMTDFFGAAGVDGLTILGQLGEAGKLDHAEGIAVARRVLGRTRLPVIVGVT APGFAAMRALAREVMELGAAGVMIAPPNTLRTDDQVVGYFRNAAEAVGPDVPFVLQDYPLTFSVQMTPGVIRRIVSENPS CVMLKHEDWPGLEKISTLRGFEADGSMRHISILVGNGGLFLDFETERGADGANTGYAFPEMLVDVVRLGRAGQRDAAHDL FDAHLPYLRYEQQQGPLGLAVRKYVFMRRGIFASDAQRKPSQALTAQAKAEVEYLLARLARTDARARLAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DHDPS family [H]
Homologues:
Organism=Escherichia coli, GI87082415, Length=305, Percent_Identity=26.5573770491803, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1786463, Length=240, Percent_Identity=24.5833333333333, Blast_Score=74, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR002220 - InterPro: IPR020625 - InterPro: IPR020624 [H]
Pfam domain/function: PF00701 DHDPS [H]
EC number: NA
Molecular weight: Translated: 33580; Mature: 33449
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLTSDIGGVVPIAPTPFHPDGRIDEVSLDRMTDFFGAAGVDGLTILGQLGEAGKLDHAE CCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHH GIAVARRVLGRTRLPVIVGVTAPGFAAMRALAREVMELGAAGVMIAPPNTLRTDDQVVGY HHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHH FRNAAEAVGPDVPFVLQDYPLTFSVQMTPGVIRRIVSENPSCVMLKHEDWPGLEKISTLR HHHHHHHHCCCCCEEEECCCEEEEEEECHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHC GFEADGSMRHISILVGNGGLFLDFETERGADGANTGYAFPEMLVDVVRLGRAGQRDAAHD CCCCCCCEEEEEEEEECCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHH LFDAHLPYLRYEQQQGPLGLAVRKYVFMRRGIFASDAQRKPSQALTAQAKAEVEYLLARL HHHHCCCHHEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH ARTDARARLAA HHHHHHHHCCC >Mature Secondary Structure PLTSDIGGVVPIAPTPFHPDGRIDEVSLDRMTDFFGAAGVDGLTILGQLGEAGKLDHAE CCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHH GIAVARRVLGRTRLPVIVGVTAPGFAAMRALAREVMELGAAGVMIAPPNTLRTDDQVVGY HHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHH FRNAAEAVGPDVPFVLQDYPLTFSVQMTPGVIRRIVSENPSCVMLKHEDWPGLEKISTLR HHHHHHHHCCCCCEEEECCCEEEEEEECHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHC GFEADGSMRHISILVGNGGLFLDFETERGADGANTGYAFPEMLVDVVRLGRAGQRDAAHD CCCCCCCEEEEEEEEECCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHH LFDAHLPYLRYEQQQGPLGLAVRKYVFMRRGIFASDAQRKPSQALTAQAKAEVEYLLARL HHHHCCCHHEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH ARTDARARLAA HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]