| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is oxdC [H]
Identifier: 170747943
GI number: 170747943
Start: 1604399
End: 1605625
Strand: Reverse
Name: oxdC [H]
Synonym: Mrad2831_1525
Alternate gene names: 170747943
Gene position: 1605625-1604399 (Counterclockwise)
Preceding gene: 170747946
Following gene: 170747942
Centisome position: 26.42
GC content: 70.25
Gene sequence:
>1227_bases ATGACCGAGATCTCCAGGCGCGCCGTCATCGCAGCCGCCGGCGGCGCGATGGCGGCATCCTCCGCCGCGGCGCAATCCGC CGGGCCCTCCGCGCCCCGTCCCGAGCGCGGCGGCAAGGGGGCCGACATCCTGGGCCCGCAGAACAGGCCTCGCGCCGCCG AGGAGCCGTTCACCCTGGCGCCGCCCGCCACCGATCACGGCACGATGCCGAACCTGAAATGGTCCTTCGCGGACAGCCAC ATGCGGCTGGAGGAGGGCGGCTGGGCGCGCCAGACCACGATCCGCGAGCTGCCGGTCTCCAAGGCCATGGCGGGGGTCAA CATGCGGCTCAAGGCCGGCGCGGTCCGCGAGATGCACTGGCACAAGGAATCCGAGTGGGCCTACATGATCAAGGGCAAGG CCCGGATCACCGCGGTCGACCAGGACGGGCGCACCTTCGCGGACGACGTCGGCGCGGGCGATCTCTGGTACTTCCCGGGC GGCATCCCGCACTCGATCCAGGGGCTCGCCGCCGACGGGGTCGACGGCTGCGAGTTCCTGCTCGTGTTCGACGACGGCGG CTTCTCGGAGGATTCCACCTTCCTGCTGACCGACTGGCTGGCGCACACGCCGACGGACGTGCTCGCCAAGAACTTCGGCC TGCCCGAGGCCGCCTTCGCCGAGGTTCCGCAGAAGGAACTCTACATCTTCCCCGGTCCCAAGCCGGGACCGCTCGCGGCC GACAAGATGGGCGGCTCCGGGCCGGTGCCGAAGACCTTCAGCCACCGGATGCTGGCGCAGGAGCCGGTCCGCACCCGGGG CGGCAGCGTGCGCGTCACCGATTCCACGGTGTTCCCGGCCTCCGTGACGATCGCGGCGGCGCTGGTCGAGGTCGAGCCCG GAGGGCTGCGCGAGCTGCACTGGCACCCGAACAGCGACGAGTGGCAGTACTACCTCTCCGGCCAGGGCCGGATGACGGTG TTCGGCTCGGAATCGAAGGCCCGCACCTTCGACTACCGGGCCGGCGACGTCGGCTACGTGCCCTTCGCCATGGGGCACTA TATCGAGAATACCGGCGACACGACCCTGACCTTCCTGGAGATGTTCAAGAGCCCGCGCTACGCCGACATCTCCCTGACGC AGTGGCTGGCCCTCACACCGCACCCCCTGGTCCAGGCCCATACCGGTCTGGATCCCAAGCTCGTCGAGGCCCTGCCGGAG ACGAAATCCCCCGTCGTGCCGGGTTGA
Upstream 100 bases:
>100_bases GGTCTCCGGGCGAGATGCCGCAGCGCACAGTGCGGCCCGTCCGCGGATCCTCCGAGCACGCGACCGGTTTCCCTGCCACT GACGCAGGGACCGATCCACG
Downstream 100 bases:
>100_bases CGCGCCCGGGAACCCGGACCGATCCTGGCGCGTCGACTTCGGACAAGCGTTTCCGAAGACCGCTCGAATCTCGCACGGAG GGACCCATGCGCGCCGCGTC
Product: oxalate decarboxylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 408; Mature: 407
Protein sequence:
>408_residues MTEISRRAVIAAAGGAMAASSAAAQSAGPSAPRPERGGKGADILGPQNRPRAAEEPFTLAPPATDHGTMPNLKWSFADSH MRLEEGGWARQTTIRELPVSKAMAGVNMRLKAGAVREMHWHKESEWAYMIKGKARITAVDQDGRTFADDVGAGDLWYFPG GIPHSIQGLAADGVDGCEFLLVFDDGGFSEDSTFLLTDWLAHTPTDVLAKNFGLPEAAFAEVPQKELYIFPGPKPGPLAA DKMGGSGPVPKTFSHRMLAQEPVRTRGGSVRVTDSTVFPASVTIAAALVEVEPGGLRELHWHPNSDEWQYYLSGQGRMTV FGSESKARTFDYRAGDVGYVPFAMGHYIENTGDTTLTFLEMFKSPRYADISLTQWLALTPHPLVQAHTGLDPKLVEALPE TKSPVVPG
Sequences:
>Translated_408_residues MTEISRRAVIAAAGGAMAASSAAAQSAGPSAPRPERGGKGADILGPQNRPRAAEEPFTLAPPATDHGTMPNLKWSFADSH MRLEEGGWARQTTIRELPVSKAMAGVNMRLKAGAVREMHWHKESEWAYMIKGKARITAVDQDGRTFADDVGAGDLWYFPG GIPHSIQGLAADGVDGCEFLLVFDDGGFSEDSTFLLTDWLAHTPTDVLAKNFGLPEAAFAEVPQKELYIFPGPKPGPLAA DKMGGSGPVPKTFSHRMLAQEPVRTRGGSVRVTDSTVFPASVTIAAALVEVEPGGLRELHWHPNSDEWQYYLSGQGRMTV FGSESKARTFDYRAGDVGYVPFAMGHYIENTGDTTLTFLEMFKSPRYADISLTQWLALTPHPLVQAHTGLDPKLVEALPE TKSPVVPG >Mature_407_residues TEISRRAVIAAAGGAMAASSAAAQSAGPSAPRPERGGKGADILGPQNRPRAAEEPFTLAPPATDHGTMPNLKWSFADSHM RLEEGGWARQTTIRELPVSKAMAGVNMRLKAGAVREMHWHKESEWAYMIKGKARITAVDQDGRTFADDVGAGDLWYFPGG IPHSIQGLAADGVDGCEFLLVFDDGGFSEDSTFLLTDWLAHTPTDVLAKNFGLPEAAFAEVPQKELYIFPGPKPGPLAAD KMGGSGPVPKTFSHRMLAQEPVRTRGGSVRVTDSTVFPASVTIAAALVEVEPGGLRELHWHPNSDEWQYYLSGQGRMTVF GSESKARTFDYRAGDVGYVPFAMGHYIENTGDTTLTFLEMFKSPRYADISLTQWLALTPHPLVQAHTGLDPKLVEALPET KSPVVPG
Specific function: Converts oxalate to formate and CO(2) in an O(2)- dependent reaction. Can also catalyze minor side reactions:oxalate oxidation to produce H(2)O(2), and oxalate-dependent, H(2)O(2)-independent dye oxidations [H]
COG id: COG2140
COG function: function code GR; Thermophilic glucose-6-phosphate isomerase and related metalloenzymes
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis oxdD [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017774 - InterPro: IPR006045 - InterPro: IPR011051 - InterPro: IPR014710 [H]
Pfam domain/function: PF00190 Cupin_1 [H]
EC number: =4.1.1.2 [H]
Molecular weight: Translated: 43970; Mature: 43839
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEISRRAVIAAAGGAMAASSAAAQSAGPSAPRPERGGKGADILGPQNRPRAAEEPFTLA CCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC PPATDHGTMPNLKWSFADSHMRLEEGGWARQTTIRELPVSKAMAGVNMRLKAGAVREMHW CCCCCCCCCCCEEEEECCCEEEECCCCCCHHHHHHHCCHHHHHHCCCEEEECCCHHHHHC HKESEWAYMIKGKARITAVDQDGRTFADDVGAGDLWYFPGGIPHSIQGLAADGVDGCEFL CCCCCEEEEEECCEEEEEECCCCCEEHHHCCCCCEEECCCCCCCCCCCEECCCCCCEEEE LVFDDGGFSEDSTFLLTDWLAHTPTDVLAKNFGLPEAAFAEVPQKELYIFPGPKPGPLAA EEECCCCCCCCCCEEEEHHHHHCCHHHHHHHCCCCHHHHHHCCCCEEEEECCCCCCCCCH DKMGGSGPVPKTFSHRMLAQEPVRTRGGSVRVTDSTVFPASVTIAAALVEVEPGGLRELH HCCCCCCCCCHHHHHHHHHHCHHHHCCCEEEEECCEECCHHHEEEEEEEEECCCCCEEEE WHPNSDEWQYYLSGQGRMTVFGSESKARTFDYRAGDVGYVPFAMGHYIENTGDTTLTFLE ECCCCCCEEEEEECCCEEEEEECCCCCEEEECCCCCCCCCHHHHHHHHCCCCCHHHHHHH MFKSPRYADISLTQWLALTPHPLVQAHTGLDPKLVEALPETKSPVVPG HHCCCCCCEEEHEEEEECCCCCHHHHCCCCCHHHHHHCCCCCCCCCCC >Mature Secondary Structure TEISRRAVIAAAGGAMAASSAAAQSAGPSAPRPERGGKGADILGPQNRPRAAEEPFTLA CCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC PPATDHGTMPNLKWSFADSHMRLEEGGWARQTTIRELPVSKAMAGVNMRLKAGAVREMHW CCCCCCCCCCCEEEEECCCEEEECCCCCCHHHHHHHCCHHHHHHCCCEEEECCCHHHHHC HKESEWAYMIKGKARITAVDQDGRTFADDVGAGDLWYFPGGIPHSIQGLAADGVDGCEFL CCCCCEEEEEECCEEEEEECCCCCEEHHHCCCCCEEECCCCCCCCCCCEECCCCCCEEEE LVFDDGGFSEDSTFLLTDWLAHTPTDVLAKNFGLPEAAFAEVPQKELYIFPGPKPGPLAA EEECCCCCCCCCCEEEEHHHHHCCHHHHHHHCCCCHHHHHHCCCCEEEEECCCCCCCCCH DKMGGSGPVPKTFSHRMLAQEPVRTRGGSVRVTDSTVFPASVTIAAALVEVEPGGLRELH HCCCCCCCCCHHHHHHHHHHCHHHHCCCEEEEECCEECCHHHEEEEEEEEECCCCCEEEE WHPNSDEWQYYLSGQGRMTVFGSESKARTFDYRAGDVGYVPFAMGHYIENTGDTTLTFLE ECCCCCCEEEEEECCCEEEEEECCCCCEEEECCCCCCCCCHHHHHHHHCCCCCHHHHHHH MFKSPRYADISLTQWLALTPHPLVQAHTGLDPKLVEALPETKSPVVPG HHCCCCCCEEEHEEEEECCCCCHHHHCCCCCHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9639930; 9384377; 10960116; 11546787; 12056897 [H]