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The map label for this gene is yabI [C]

Identifier: 170747578

GI number: 170747578

Start: 1206540

End: 1207061

Strand: Reverse

Name: yabI [C]

Synonym: Mrad2831_1146

Alternate gene names: 170747578

Gene position: 1207061-1206540 (Counterclockwise)

Preceding gene: 170747597

Following gene: 170747577

Centisome position: 19.86

GC content: 72.8

Gene sequence:

>522_bases
ATGGACATCGAAGCCCTGCGCACCTCGACCCTCGCCTTCGTGGAGGCGCACAAGGCCTGGACGCCCCTCATCGCCGGCGG
CCTCGCCTTCTGCGAATCGATCGCGATCCTGTCGCTGTTCGTCCCGGCGACCGTGATCCTGGTCGGCATCGGGGCCCTCG
TCGGCGGCGCCGACATCCCGTTCTGGCCGGTGGTGATCGCCGCGGCGCTGGGGGCCGCCCTCGGCGACTGGATCTCCTAC
GAGGCCGGGCGCTGGTTCGGGCCGGGGGCGAAGACCAAGTGGCCGCTGCGGCGCTATCCCGAGCTCATGGCCAAGGCCGA
GGCCTTCATCGGCCGCTGGGGCATCGCCGCGGTGGCTCTGGGACGCTTCTTCGGGCCGGCCCGCGCCCTGGTCCCGCTCT
TCGCCGGGATCCTCGGCCTGGCGCGGCTGCCGTTCCAGCTGGCCAACGTCGCCTCCGCTCTGGTCTGGGCCTTCGTGCTG
CTGGCCCCCGGGGCCGGGCTGCTGACGTGGCTCGACCGATGA

Upstream 100 bases:

>100_bases
GTTCCCGCGCCGGCCGCACCCCTGTCCCTTGCCGCCCTCCCCCGCGCGCCTCAGATGGGACCGACCCTCCCCCTGCCCCC
TGAGCCCCGTTCGGAGCCCC

Downstream 100 bases:

>100_bases
CCCGGCGCGGCCGCTGATGCGCTGCTTCCCGCCCGAGCGGATCGTCTGCCTCACCGAGGAGACGGTCGAGACCCTGTACC
TCCTGGGCGCGGAGGACAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MDIEALRTSTLAFVEAHKAWTPLIAGGLAFCESIAILSLFVPATVILVGIGALVGGADIPFWPVVIAAALGAALGDWISY
EAGRWFGPGAKTKWPLRRYPELMAKAEAFIGRWGIAAVALGRFFGPARALVPLFAGILGLARLPFQLANVASALVWAFVL
LAPGAGLLTWLDR

Sequences:

>Translated_173_residues
MDIEALRTSTLAFVEAHKAWTPLIAGGLAFCESIAILSLFVPATVILVGIGALVGGADIPFWPVVIAAALGAALGDWISY
EAGRWFGPGAKTKWPLRRYPELMAKAEAFIGRWGIAAVALGRFFGPARALVPLFAGILGLARLPFQLANVASALVWAFVL
LAPGAGLLTWLDR
>Mature_173_residues
MDIEALRTSTLAFVEAHKAWTPLIAGGLAFCESIAILSLFVPATVILVGIGALVGGADIPFWPVVIAAALGAALGDWISY
EAGRWFGPGAKTKWPLRRYPELMAKAEAFIGRWGIAAVALGRFFGPARALVPLFAGILGLARLPFQLANVASALVWAFVL
LAPGAGLLTWLDR

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1786252, Length=153, Percent_Identity=32.6797385620915, Blast_Score=87, Evalue=5e-19,
Organism=Escherichia coli, GI1789481, Length=136, Percent_Identity=30.1470588235294, Blast_Score=70, Evalue=9e-14,
Organism=Escherichia coli, GI1789384, Length=139, Percent_Identity=33.8129496402878, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 18268; Mature: 18268

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIEALRTSTLAFVEAHKAWTPLIAGGLAFCESIAILSLFVPATVILVGIGALVGGADIP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
FWPVVIAAALGAALGDWISYEAGRWFGPGAKTKWPLRRYPELMAKAEAFIGRWGIAAVAL
HHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GRFFGPARALVPLFAGILGLARLPFQLANVASALVWAFVLLAPGAGLLTWLDR
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCC
>Mature Secondary Structure
MDIEALRTSTLAFVEAHKAWTPLIAGGLAFCESIAILSLFVPATVILVGIGALVGGADIP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
FWPVVIAAALGAALGDWISYEAGRWFGPGAKTKWPLRRYPELMAKAEAFIGRWGIAAVAL
HHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GRFFGPARALVPLFAGILGLARLPFQLANVASALVWAFVLLAPGAGLLTWLDR
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10993077 [H]