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The map label for this gene is ctaC [H]

Identifier: 170747470

GI number: 170747470

Start: 1091628

End: 1092617

Strand: Reverse

Name: ctaC [H]

Synonym: Mrad2831_1038

Alternate gene names: 170747470

Gene position: 1092617-1091628 (Counterclockwise)

Preceding gene: 170747471

Following gene: 170747469

Centisome position: 17.98

GC content: 68.38

Gene sequence:

>990_bases
ATGACGCCGAGCCACGATTCCCTCCAGCTCTGGCCCGCCGCGGTCTCCGCCACCGCGAGCGAGACCGACCTGCTCATCCT
GGCCTTCACGGTCCTGACGCTGCTGCTGACCGTGCCGGTCTTCGTGGCGATCACCTACTTCGCCCTGCGCTACCGCGAGG
GCTCCGAGGCGGACCGGAGCCCCTCGGGCATCCGCTCGAACCTCATCGAGATCAGCTGGATGCTGATCCCGTTCCTGCTG
ACGCTGATCTTCTTCGTCTGGGGCGCGCGGCTGTTCATCCAGTCGAAGAACCCGCCCCCCGACGCCATGGTGGTCGAGGC
GATCGGCCGGCAGTGGATGTGGAAGTTCCAGCACCCGACGGGCCAGTCCGAGATCAACAACCTGCACCTGCCGATCGGCC
AGCCGATCCGCCTGCATATCATCAGCCAGGACGTGATCCACGCCCTCTACCTGCCGGCCGTGCGGATGCAGGTGGCGGCC
CTGCCCGACCGCTATACCGACCTGTGGTTCAAGGCCGACAAGGTTGGCACCTACCACCTCTACTGCTCGGAATATTGCGG
CACCGACCATTCCGTGATGGGCGGTGAGGTCACCTTCATGAACCCCGGCGACTACCAGGACTGGCTGACCCACGCGGGCG
CGCAGCAGGGCAAGGTCGCGGCCGGTCGCGCCCTCTACGAGGCCTATGGCTGCGCCGGCTGCCACGAGCCCGGCTCCCCC
GTGAAGGCGCCGAGCCTCGCCGGCCTCTACGGCAGCCAAGTGACGCTCGCCGACGGCCGCACCGTCACGGCCGATGACGG
ATGGCTGCGCGAGAAGATCCTGAACCCGAACGGCGATCGGCTCGCCGGCGGGGGCAAGCAGGTCATGCCGAGCTTCGCCG
GCCGGATCCCGGCGGACGAGCTCGGCACGCTGATCGATTTCCTGAAATCCTACGCGGGCCCGGCCTCCGGCAAGGCCGCG
GACGCGACGCCGCCGGGAGCGACACGATGA

Upstream 100 bases:

>100_bases
GTTACCGGGACGAGGCCCGCACCCGCGCCCGCATCCCGATCGGGCGCGCCATGGACCTGACCGTCGGCCGCTCTCTCGAA
CCGGCGGAGCCCGCTGCGCG

Downstream 100 bases:

>100_bases
GCGCATCGGGCAGCATCGGCGGCACCGCCCGCCGGGAACCCCACGCCCCGGAATCCACGATCGGGCGCAAGGCCGACTAC
CTGCACGCGGAATCGACTCT

Product: cytochrome c oxidase subunit II

Products: NA

Alternate protein names: Cytochrome aa3 subunit 2; Cytochrome c oxidase polypeptide II; Oxidase aa(3) subunit 2 [H]

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MTPSHDSLQLWPAAVSATASETDLLILAFTVLTLLLTVPVFVAITYFALRYREGSEADRSPSGIRSNLIEISWMLIPFLL
TLIFFVWGARLFIQSKNPPPDAMVVEAIGRQWMWKFQHPTGQSEINNLHLPIGQPIRLHIISQDVIHALYLPAVRMQVAA
LPDRYTDLWFKADKVGTYHLYCSEYCGTDHSVMGGEVTFMNPGDYQDWLTHAGAQQGKVAAGRALYEAYGCAGCHEPGSP
VKAPSLAGLYGSQVTLADGRTVTADDGWLREKILNPNGDRLAGGGKQVMPSFAGRIPADELGTLIDFLKSYAGPASGKAA
DATPPGATR

Sequences:

>Translated_329_residues
MTPSHDSLQLWPAAVSATASETDLLILAFTVLTLLLTVPVFVAITYFALRYREGSEADRSPSGIRSNLIEISWMLIPFLL
TLIFFVWGARLFIQSKNPPPDAMVVEAIGRQWMWKFQHPTGQSEINNLHLPIGQPIRLHIISQDVIHALYLPAVRMQVAA
LPDRYTDLWFKADKVGTYHLYCSEYCGTDHSVMGGEVTFMNPGDYQDWLTHAGAQQGKVAAGRALYEAYGCAGCHEPGSP
VKAPSLAGLYGSQVTLADGRTVTADDGWLREKILNPNGDRLAGGGKQVMPSFAGRIPADELGTLIDFLKSYAGPASGKAA
DATPPGATR
>Mature_328_residues
TPSHDSLQLWPAAVSATASETDLLILAFTVLTLLLTVPVFVAITYFALRYREGSEADRSPSGIRSNLIEISWMLIPFLLT
LIFFVWGARLFIQSKNPPPDAMVVEAIGRQWMWKFQHPTGQSEINNLHLPIGQPIRLHIISQDVIHALYLPAVRMQVAAL
PDRYTDLWFKADKVGTYHLYCSEYCGTDHSVMGGEVTFMNPGDYQDWLTHAGAQQGKVAAGRALYEAYGCAGCHEPGSPV
KAPSLAGLYGSQVTLADGRTVTADDGWLREKILNPNGDRLAGGGKQVMPSFAGRIPADELGTLIDFLKSYAGPASGKAAD
ATPPGATR

Specific function: Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

Organism=Homo sapiens, GI251831110, Length=147, Percent_Identity=26.530612244898, Blast_Score=71, Evalue=2e-12,
Organism=Escherichia coli, GI1786635, Length=180, Percent_Identity=25.5555555555556, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001505
- InterPro:   IPR008972
- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR014222
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759 [H]

Pfam domain/function: PF00116 COX2; PF02790 COX2_TM; PF00034 Cytochrom_C [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 35787; Mature: 35656

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: PS00078 COX2 ; PS50999 COX2_TM ; PS50857 COX2_CUA ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPSHDSLQLWPAAVSATASETDLLILAFTVLTLLLTVPVFVAITYFALRYREGSEADRS
CCCCCCCEEECHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PSGIRSNLIEISWMLIPFLLTLIFFVWGARLFIQSKNPPPDAMVVEAIGRQWMWKFQHPT
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHEEEECCCC
GQSEINNLHLPIGQPIRLHIISQDVIHALYLPAVRMQVAALPDRYTDLWFKADKVGTYHL
CCHHCCEEECCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHEEEECCCCEEEE
YCSEYCGTDHSVMGGEVTFMNPGDYQDWLTHAGAQQGKVAAGRALYEAYGCAGCHEPGSP
EEHHHCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
VKAPSLAGLYGSQVTLADGRTVTADDGWLREKILNPNGDRLAGGGKQVMPSFAGRIPADE
CCCCCCCCCCCCEEEEECCCEEECCCCHHHHHHCCCCCCEECCCCHHHHHHHHCCCCHHH
LGTLIDFLKSYAGPASGKAADATPPGATR
HHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TPSHDSLQLWPAAVSATASETDLLILAFTVLTLLLTVPVFVAITYFALRYREGSEADRS
CCCCCCEEECHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PSGIRSNLIEISWMLIPFLLTLIFFVWGARLFIQSKNPPPDAMVVEAIGRQWMWKFQHPT
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHEEEECCCC
GQSEINNLHLPIGQPIRLHIISQDVIHALYLPAVRMQVAALPDRYTDLWFKADKVGTYHL
CCHHCCEEECCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHEEEECCCCEEEE
YCSEYCGTDHSVMGGEVTFMNPGDYQDWLTHAGAQQGKVAAGRALYEAYGCAGCHEPGSP
EEHHHCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
VKAPSLAGLYGSQVTLADGRTVTADDGWLREKILNPNGDRLAGGGKQVMPSFAGRIPADE
CCCCCCCCCCCCEEEEECCCEEECCCCHHHHHHCCCCCCEECCCCHHHHHHHHCCCCHHH
LGTLIDFLKSYAGPASGKAADATPPGATR
HHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7678007 [H]