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The map label for this gene is ucpA [C]

Identifier: 170747379

GI number: 170747379

Start: 992706

End: 993473

Strand: Reverse

Name: ucpA [C]

Synonym: Mrad2831_0946

Alternate gene names: 170747379

Gene position: 993473-992706 (Counterclockwise)

Preceding gene: 170747380

Following gene: 170747378

Centisome position: 16.35

GC content: 73.05

Gene sequence:

>768_bases
ATGCCCCGTATCCTGATCACCGGCGCGTCGAGCGGCATCGGCGCCGCGCTGGCGCGCCACTACGCGCAATCCGGCACGAG
CCTCATCCTGGTCGGCCGCAACGCCGAGCGGCTGGAGATCGTCGCCCGCGACTGCCGCGCCGGCGGCGCGACCGTCGAGA
CCGCCCGCCTCGACACCCGCGACCGGGCCGCCACCGTGGCGCTGGTCCACCGGTCGGATGCCGAGGCCCCCCTCGACCTC
GTCATCGCCAACGCGGCGGTGAACGGCGGCAATCAGGAGGGGCAGGTGGAGGCCGAGGACGTGGCCTTCGAGACCGCCGA
CATCAACTACACCGGCACGCTCAACGTGATGCTGCCCACCCTGACGCTGATGCTCCAGCGCGGGCGCGGTCAGATCGTGC
TGCTGTCGTCGCTCGCGGCCTACGCGCCGCTCCAGGACGCGCCGGCCTACAGCGGCGCCAAGGCGGCCCTGGTCGCCCAC
GGCCTCGCCCTGCGCCAGAAGGTCGCGCCCCGGGGCGTGAAGGTCAACGTCGTCACCCCGGGCTACGTGAAGACGCCGAT
GGGCGGCGAGCTCAAGGGCTGGCGGCCGCTGGAGATCAGCGCCGAGGAGGCGGCCGTGCGGATCGCCAAGGGCATCGCGG
CCAACCGCGACGTGATCGCCTTCCCGTTCATCCTCACGGCGCTCGCCCGCACCGTGCTGCTCCTGCCCGAGAACGTCCGC
AAGGCCGGCCTCTACGCCTTCCGGTTCCAGCGGCGGAAGCGGCGCTGA

Upstream 100 bases:

>100_bases
TCCGGGACCGTCGCCGTTCGGCGGCCTTTGAAGCGCGTTTCACCGCCGGTGAGCCTTTCCCGGCCTTGATCTTTCCCCGC
GCGGCGGCGTAACCCGCCCC

Downstream 100 bases:

>100_bases
TGGCGCGGCCCCGGATCGCGCTGTTCGTCCTGGAGGCGCTGCCGAACGCCCGCGCGGTGCGCCGGCTCGTCGCCGATCTC
CGGGCCGACATCGCGCTGGT

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MPRILITGASSGIGAALARHYAQSGTSLILVGRNAERLEIVARDCRAGGATVETARLDTRDRAATVALVHRSDAEAPLDL
VIANAAVNGGNQEGQVEAEDVAFETADINYTGTLNVMLPTLTLMLQRGRGQIVLLSSLAAYAPLQDAPAYSGAKAALVAH
GLALRQKVAPRGVKVNVVTPGYVKTPMGGELKGWRPLEISAEEAAVRIAKGIAANRDVIAFPFILTALARTVLLLPENVR
KAGLYAFRFQRRKRR

Sequences:

>Translated_255_residues
MPRILITGASSGIGAALARHYAQSGTSLILVGRNAERLEIVARDCRAGGATVETARLDTRDRAATVALVHRSDAEAPLDL
VIANAAVNGGNQEGQVEAEDVAFETADINYTGTLNVMLPTLTLMLQRGRGQIVLLSSLAAYAPLQDAPAYSGAKAALVAH
GLALRQKVAPRGVKVNVVTPGYVKTPMGGELKGWRPLEISAEEAAVRIAKGIAANRDVIAFPFILTALARTVLLLPENVR
KAGLYAFRFQRRKRR
>Mature_254_residues
PRILITGASSGIGAALARHYAQSGTSLILVGRNAERLEIVARDCRAGGATVETARLDTRDRAATVALVHRSDAEAPLDLV
IANAAVNGGNQEGQVEAEDVAFETADINYTGTLNVMLPTLTLMLQRGRGQIVLLSSLAAYAPLQDAPAYSGAKAALVAHG
LALRQKVAPRGVKVNVVTPGYVKTPMGGELKGWRPLEISAEEAAVRIAKGIAANRDVIAFPFILTALARTVLLLPENVRK
AGLYAFRFQRRKRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=187, Percent_Identity=29.4117647058824, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI20149619, Length=193, Percent_Identity=30.0518134715026, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI142976729, Length=243, Percent_Identity=27.1604938271605, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI5031737, Length=205, Percent_Identity=25.3658536585366, Blast_Score=68, Evalue=6e-12,
Organism=Homo sapiens, GI210032110, Length=243, Percent_Identity=24.6913580246914, Blast_Score=68, Evalue=9e-12,
Organism=Homo sapiens, GI33667109, Length=188, Percent_Identity=26.5957446808511, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI7706318, Length=194, Percent_Identity=29.8969072164948, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI4504503, Length=200, Percent_Identity=25.5, Blast_Score=65, Evalue=5e-11,
Organism=Homo sapiens, GI4503817, Length=205, Percent_Identity=29.2682926829268, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI126723191, Length=195, Percent_Identity=26.1538461538462, Blast_Score=64, Evalue=9e-11,
Organism=Escherichia coli, GI87082100, Length=185, Percent_Identity=34.5945945945946, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1787820, Length=183, Percent_Identity=30.0546448087432, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1787335, Length=184, Percent_Identity=26.0869565217391, Blast_Score=62, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17560676, Length=188, Percent_Identity=27.1276595744681, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17563726, Length=197, Percent_Identity=28.9340101522843, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17560332, Length=252, Percent_Identity=28.5714285714286, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17538486, Length=218, Percent_Identity=30.7339449541284, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17565030, Length=223, Percent_Identity=27.8026905829596, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI32563809, Length=191, Percent_Identity=27.2251308900524, Blast_Score=64, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17507613, Length=215, Percent_Identity=26.5116279069767, Blast_Score=64, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17544670, Length=203, Percent_Identity=28.5714285714286, Blast_Score=64, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=192, Percent_Identity=29.1666666666667, Blast_Score=70, Evalue=5e-13,
Organism=Drosophila melanogaster, GI21358495, Length=192, Percent_Identity=31.25, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI23397609, Length=187, Percent_Identity=33.6898395721925, Blast_Score=78, Evalue=6e-15,
Organism=Drosophila melanogaster, GI28571526, Length=190, Percent_Identity=33.6842105263158, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI21355319, Length=191, Percent_Identity=25.6544502617801, Blast_Score=68, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 27113; Mature: 26982

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRILITGASSGIGAALARHYAQSGTSLILVGRNAERLEIVARDCRAGGATVETARLDTR
CCEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCC
DRAATVALVHRSDAEAPLDLVIANAAVNGGNQEGQVEAEDVAFETADINYTGTLNVMLPT
CCCEEEEEEECCCCCCCEEEEEEEEEECCCCCCCCEEHHHEEEEECCCCEEEEEHHHHHH
LTLMLQRGRGQIVLLSSLAAYAPLQDAPAYSGAKAALVAHGLALRQKVAPRGVKVNVVTP
HHHHHHCCCCCEEEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECC
GYVKTPMGGELKGWRPLEISAEEAAVRIAKGIAANRDVIAFPFILTALARTVLLLPENVR
CEEECCCCCCCCCCEEEEECHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHCCCHHH
KAGLYAFRFQRRKRR
HHHHHHHHHHHHHCC
>Mature Secondary Structure 
PRILITGASSGIGAALARHYAQSGTSLILVGRNAERLEIVARDCRAGGATVETARLDTR
CEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCC
DRAATVALVHRSDAEAPLDLVIANAAVNGGNQEGQVEAEDVAFETADINYTGTLNVMLPT
CCCEEEEEEECCCCCCCEEEEEEEEEECCCCCCCCEEHHHEEEEECCCCEEEEEHHHHHH
LTLMLQRGRGQIVLLSSLAAYAPLQDAPAYSGAKAALVAHGLALRQKVAPRGVKVNVVTP
HHHHHHCCCCCEEEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECC
GYVKTPMGGELKGWRPLEISAEEAAVRIAKGIAANRDVIAFPFILTALARTVLLLPENVR
CEEECCCCCCCCCCEEEEECHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHCCCHHH
KAGLYAFRFQRRKRR
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1730672 [H]