Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

Click here to switch to the map view.

The map label for this gene is kpsS [H]

Identifier: 170747380

GI number: 170747380

Start: 993589

End: 994896

Strand: Reverse

Name: kpsS [H]

Synonym: Mrad2831_0947

Alternate gene names: 170747380

Gene position: 994896-993589 (Counterclockwise)

Preceding gene: 170747384

Following gene: 170747379

Centisome position: 16.37

GC content: 70.49

Gene sequence:

>1308_bases
ATGCAACAGCCCGCCCCCGACGCCCTCCGCGACCGCCCCGCGACCTTCCTCTTCCTGCAGGGCATCGCGACGCCGTTCTT
CTCCGATCTCGGAAAGGCGCTGCGCGCGCGGGGACACAGCGTCCGGCGCATCAATCTCTGCCCCGGCGACTGGCTGTTCT
GGAGCGGCGAGGCCGACAATTACCGCGGCCGCCGCGAGGCCTGGGGCGAGTATCTCGAGGCCTATCTGGACCGCGAGAGC
GTGACCGACATCGTGCTGTTCGGCGATTGCCGGCCGTTCCACAAGGCGGCCCGCATGATCGCCGAGTATCGCGGCCTGCG
GGTGCACGTGTTCGAGGAGGGCTATATCCGCCCGAACTGGATCACCTGCGAGCTGGGCGGCGTGAACGGCTTCTCGTCGC
TTCCCCGGACGGCCGCCGAGATCCGGGCCCTGGCGCGGCGCCTGCCGCAGCCCGGCCGGGCGATGCCCTCCACGGGCGAC
ATGGCCCGCCGCAGCGTCTGGGACGTCGGCTACAACCTCGCCAACGTGCTGTTCCCCTACCTCTTCCCGCATTTCCGCAG
CCACCGGCCGACCCATATCGCGGCCGAGTATGCCGGCTGGATCAAGAAGTTCGCGCGCCGCGCCCATACCCGCCGCGAGG
CGGCCCGCTGCGACGAGATCTACCGCGCGGTCGGCTGCGACTACTTCCTGCTGCCGCTGCAGCTCGACAGCGACTACCAG
ATCCGGGTCCACTCGCCGTTCCTCGGCGTCGAGGGCTTCATGGACCGGGTGATCAAGTCCTTCGCGGACGGCTCGTCGGC
GCCGACCCGGCTGCTGGTGAAGCTGCACCCGCTCGACAGCGGCCTGATCAACTGGCGCAAGTTCGCCCGCGCCTCGGCCC
GGCGCCACGGCGTCAGCGACCGGCTCGACTTCATCGACGGCGGCGACCTCCCGGCCCTGATCAAGGGCGCCCGCGGCGTG
GTGATCGTCAACTCCACGGTGGGGATGCTGTCCCTCGAGATGGGCTGCCCGACCCACGCGGTCGGCACCGCGATCTACAA
CATGGCCGGCCTGACCCATCAGGGCGATCTCGACAGCTTCTGGAAGAATCCGACGCCGCCGGAGATGGACCTGATGGCGG
ATTTCCGCCGCGTGGTCCTGCACCGGACCCAGGTCAACGGCGGCTTCTTCTCCAAGGAGGCGATCGACCGCGCGGTGGCC
GGCTCGGTGCCGCGGATGGAGGCGGCCCTGCCCGACGCGATGCTGGCGGCGGCGCGGGCGGTCAGCGAGGTGGCCGAGCG
CGACGGCGAGCTCGCGCCGGTCTACTGA

Upstream 100 bases:

>100_bases
GTGGCTTCGGATTGCGGGGCCGCCGGGCACCGTGCCACCTCAAGAGTCTCTCGCCGGTGCGGTTCATCCGGCCCAGGGTC
AAGGACAGAAGCGCCGCGGA

Downstream 100 bases:

>100_bases
CCGGACTCGCCGGACTCCGGGACCGTCGCCGTTCGGCGGCCTTTGAAGCGCGTTTCACCGCCGGTGAGCCTTTCCCGGCC
TTGATCTTTCCCCGCGCGGC

Product: capsule polysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MQQPAPDALRDRPATFLFLQGIATPFFSDLGKALRARGHSVRRINLCPGDWLFWSGEADNYRGRREAWGEYLEAYLDRES
VTDIVLFGDCRPFHKAARMIAEYRGLRVHVFEEGYIRPNWITCELGGVNGFSSLPRTAAEIRALARRLPQPGRAMPSTGD
MARRSVWDVGYNLANVLFPYLFPHFRSHRPTHIAAEYAGWIKKFARRAHTRREAARCDEIYRAVGCDYFLLPLQLDSDYQ
IRVHSPFLGVEGFMDRVIKSFADGSSAPTRLLVKLHPLDSGLINWRKFARASARRHGVSDRLDFIDGGDLPALIKGARGV
VIVNSTVGMLSLEMGCPTHAVGTAIYNMAGLTHQGDLDSFWKNPTPPEMDLMADFRRVVLHRTQVNGGFFSKEAIDRAVA
GSVPRMEAALPDAMLAAARAVSEVAERDGELAPVY

Sequences:

>Translated_435_residues
MQQPAPDALRDRPATFLFLQGIATPFFSDLGKALRARGHSVRRINLCPGDWLFWSGEADNYRGRREAWGEYLEAYLDRES
VTDIVLFGDCRPFHKAARMIAEYRGLRVHVFEEGYIRPNWITCELGGVNGFSSLPRTAAEIRALARRLPQPGRAMPSTGD
MARRSVWDVGYNLANVLFPYLFPHFRSHRPTHIAAEYAGWIKKFARRAHTRREAARCDEIYRAVGCDYFLLPLQLDSDYQ
IRVHSPFLGVEGFMDRVIKSFADGSSAPTRLLVKLHPLDSGLINWRKFARASARRHGVSDRLDFIDGGDLPALIKGARGV
VIVNSTVGMLSLEMGCPTHAVGTAIYNMAGLTHQGDLDSFWKNPTPPEMDLMADFRRVVLHRTQVNGGFFSKEAIDRAVA
GSVPRMEAALPDAMLAAARAVSEVAERDGELAPVY
>Mature_435_residues
MQQPAPDALRDRPATFLFLQGIATPFFSDLGKALRARGHSVRRINLCPGDWLFWSGEADNYRGRREAWGEYLEAYLDRES
VTDIVLFGDCRPFHKAARMIAEYRGLRVHVFEEGYIRPNWITCELGGVNGFSSLPRTAAEIRALARRLPQPGRAMPSTGD
MARRSVWDVGYNLANVLFPYLFPHFRSHRPTHIAAEYAGWIKKFARRAHTRREAARCDEIYRAVGCDYFLLPLQLDSDYQ
IRVHSPFLGVEGFMDRVIKSFADGSSAPTRLLVKLHPLDSGLINWRKFARASARRHGVSDRLDFIDGGDLPALIKGARGV
VIVNSTVGMLSLEMGCPTHAVGTAIYNMAGLTHQGDLDSFWKNPTPPEMDLMADFRRVVLHRTQVNGGFFSKEAIDRAVA
GSVPRMEAALPDAMLAAARAVSEVAERDGELAPVY

Specific function: Unknown

COG id: COG3562

COG function: function code M; Capsule polysaccharide export protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007833 [H]

Pfam domain/function: PF05159 Capsule_synth [H]

EC number: NA

Molecular weight: Translated: 48662; Mature: 48662

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQPAPDALRDRPATFLFLQGIATPFFSDLGKALRARGHSVRRINLCPGDWLFWSGEADN
CCCCCCCHHHCCCCCEEEHHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCCC
YRGRREAWGEYLEAYLDRESVTDIVLFGDCRPFHKAARMIAEYRGLRVHVFEEGYIRPNW
CCCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCE
ITCELGGVNGFSSLPRTAAEIRALARRLPQPGRAMPSTGDMARRSVWDVGYNLANVLFPY
EEEEECCCCCHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LFPHFRSHRPTHIAAEYAGWIKKFARRAHTRREAARCDEIYRAVGCDYFLLPLQLDSDYQ
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCE
IRVHSPFLGVEGFMDRVIKSFADGSSAPTRLLVKLHPLDSGLINWRKFARASARRHGVSD
EEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCH
RLDFIDGGDLPALIKGARGVVIVNSTVGMLSLEMGCPTHAVGTAIYNMAGLTHQGDLDSF
HCCCCCCCCCHHHHCCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCHHH
WKNPTPPEMDLMADFRRVVLHRTQVNGGFFSKEAIDRAVAGSVPRMEAALPDAMLAAARA
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHCCHHHHHHHHH
VSEVAERDGELAPVY
HHHHHHCCCCCCCCC
>Mature Secondary Structure
MQQPAPDALRDRPATFLFLQGIATPFFSDLGKALRARGHSVRRINLCPGDWLFWSGEADN
CCCCCCCHHHCCCCCEEEHHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCCC
YRGRREAWGEYLEAYLDRESVTDIVLFGDCRPFHKAARMIAEYRGLRVHVFEEGYIRPNW
CCCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCE
ITCELGGVNGFSSLPRTAAEIRALARRLPQPGRAMPSTGDMARRSVWDVGYNLANVLFPY
EEEEECCCCCHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LFPHFRSHRPTHIAAEYAGWIKKFARRAHTRREAARCDEIYRAVGCDYFLLPLQLDSDYQ
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCE
IRVHSPFLGVEGFMDRVIKSFADGSSAPTRLLVKLHPLDSGLINWRKFARASARRHGVSD
EEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCH
RLDFIDGGDLPALIKGARGVVIVNSTVGMLSLEMGCPTHAVGTAIYNMAGLTHQGDLDSF
HCCCCCCCCCHHHHCCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCHHH
WKNPTPPEMDLMADFRRVVLHRTQVNGGFFSKEAIDRAVAGSVPRMEAALPDAMLAAARA
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHCCHHHHHHHHH
VSEVAERDGELAPVY
HHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8397187; 1735705 [H]