| Definition | Escherichia coli SMS-3-5 chromosome, complete genome. |
|---|---|
| Accession | NC_010498 |
| Length | 5,068,389 |
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The map label for this gene is yhiN [H]
Identifier: 170683730
GI number: 170683730
Start: 3847807
End: 3849009
Strand: Reverse
Name: yhiN [H]
Synonym: EcSMS35_3781
Alternate gene names: 170683730
Gene position: 3849009-3847807 (Counterclockwise)
Preceding gene: 170682188
Following gene: 170682687
Centisome position: 75.94
GC content: 54.7
Gene sequence:
>1203_bases GTGGAAAGGTTTGATGCCATTATTATAGGCGCTGGTGCGGCAGGTATGTTCTGTTCTGCGCTGGCAGGTCAGGCAGGACG CCGGGTTCTGCTGATCGATAATGGTAAAAAACCAGGGCGCAAAATCCTCATGTCTGGCGGTGGGCGCTGCAACTTTACCA ACCTTTATGTCGAACCGGGCGCTTATCTGAGCCAGAATCCGCATTTTTGTAAGTCTGCACTCGCGCGTTTTACCCAGTGG GATTTCATTGATCTGGTCAATAAACACGGCATCACCTGGCACGAGAAAACGTTAGGGCAACTCTTCTGCGATGACTCCGC GCAGCAGATTGTCGACATGCTGGTGGATGAGTGCGAGAAGGGCAATGTGACCTTCAGATTGCGTAGCGAAGTGCTGAGTG TGGCGAAGGATGAAACAGGCTTCACGCTTGAACTGAACGGCATGACTGTCGGTTGCGAAAAGCTGGTCATCGCGACCGGT GGGCTGTCAATGCCGGGGCTGGGCGCATCGCCGTTTGGTTATAAGATTGCCGAACAATTTGGCCTCAACGTGCTGCCGAC CCGCGCGGGCCTGGTGCCATTCACTCTGCATAAACCGTTGCTCGAAGAGTTACAGGTGCTGGCGGGCGTGGCGGTGCCTT CCGTGATTACCGCTGAAAACGGCACCGTTTTCCGTGAGAACTTACTCTTCACCCACCGCGGCTTATCTGGACCGGCGGTG TTGCAAATTTCCAGCTACTGGCAACCGGGTGAATTTGTCAGTATCAATCTGCTACCGGATGTGGACCTCGAAACCTTCCT GAATGAGCAGCGTAATGCACATCCGAATCAGAGCCTGAAAAACACACTGGCGGTTCATCTACCGAAGCGGTTGGTTGAAC GTTTACAGCAACTCGGGCAAATCCCGGATGTTTCGCTAAAACAGCTCAACGTGCGTGACCAACAGGCACTGATTAGCACA TTGACCGACTGGCGCGTACAACCCAACGGCACTGAAGGCTATCGTACTGCTGAAGTGACGCTCGGCGGCGTGGACACCAA CGAACTCTCTTCACGGACGATGGAAGCGCGCAAAGTGCCAGGGCTGTACTTCATCGGCGAAGTGATGGACGTCACCGGTT GGCTGGGGGGCTATAATTTCCAGTGGGCGTGGTCGAGTGCGTGGGCTTGTGCGCAGGATTTGATTGCAGCGAAGTCGTCC TGA
Upstream 100 bases:
>100_bases TATAATTCAGGCAAATACTTCCTTTTAGTAATATTGATGCTGGTGCGACCACTGAGGAATCTTTACAATTCACGCCCGTT TTTTCTTAGAGGAGCGCAAC
Downstream 100 bases:
>100_bases GCTATTTCCTAAAGATGAAAATTATTAGAGTCGCATTAAAAATGAGCTAATTTTGATAGTGGTTATCTTGTGATTATTTT CTAATGAGCCTGTGAACTGA
Product: pyridine nucleotide-disulfide oxidoreductase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MERFDAIIIGAGAAGMFCSALAGQAGRRVLLIDNGKKPGRKILMSGGGRCNFTNLYVEPGAYLSQNPHFCKSALARFTQW DFIDLVNKHGITWHEKTLGQLFCDDSAQQIVDMLVDECEKGNVTFRLRSEVLSVAKDETGFTLELNGMTVGCEKLVIATG GLSMPGLGASPFGYKIAEQFGLNVLPTRAGLVPFTLHKPLLEELQVLAGVAVPSVITAENGTVFRENLLFTHRGLSGPAV LQISSYWQPGEFVSINLLPDVDLETFLNEQRNAHPNQSLKNTLAVHLPKRLVERLQQLGQIPDVSLKQLNVRDQQALIST LTDWRVQPNGTEGYRTAEVTLGGVDTNELSSRTMEARKVPGLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQDLIAAKSS
Sequences:
>Translated_400_residues MERFDAIIIGAGAAGMFCSALAGQAGRRVLLIDNGKKPGRKILMSGGGRCNFTNLYVEPGAYLSQNPHFCKSALARFTQW DFIDLVNKHGITWHEKTLGQLFCDDSAQQIVDMLVDECEKGNVTFRLRSEVLSVAKDETGFTLELNGMTVGCEKLVIATG GLSMPGLGASPFGYKIAEQFGLNVLPTRAGLVPFTLHKPLLEELQVLAGVAVPSVITAENGTVFRENLLFTHRGLSGPAV LQISSYWQPGEFVSINLLPDVDLETFLNEQRNAHPNQSLKNTLAVHLPKRLVERLQQLGQIPDVSLKQLNVRDQQALIST LTDWRVQPNGTEGYRTAEVTLGGVDTNELSSRTMEARKVPGLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQDLIAAKSS >Mature_400_residues MERFDAIIIGAGAAGMFCSALAGQAGRRVLLIDNGKKPGRKILMSGGGRCNFTNLYVEPGAYLSQNPHFCKSALARFTQW DFIDLVNKHGITWHEKTLGQLFCDDSAQQIVDMLVDECEKGNVTFRLRSEVLSVAKDETGFTLELNGMTVGCEKLVIATG GLSMPGLGASPFGYKIAEQFGLNVLPTRAGLVPFTLHKPLLEELQVLAGVAVPSVITAENGTVFRENLLFTHRGLSGPAV LQISSYWQPGEFVSINLLPDVDLETFLNEQRNAHPNQSLKNTLAVHLPKRLVERLQQLGQIPDVSLKQLNVRDQQALIST LTDWRVQPNGTEGYRTAEVTLGGVDTNELSSRTMEARKVPGLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQDLIAAKSS
Specific function: Unknown
COG id: COG2081
COG function: function code R; Predicted flavoproteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0933 [H]
Homologues:
Organism=Escherichia coli, GI2367234, Length=400, Percent_Identity=99.5, Blast_Score=822, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004792 - InterPro: IPR013027 - InterPro: IPR023166 [H]
Pfam domain/function: PF03486 HI0933_like [H]
EC number: NA
Molecular weight: Translated: 43786; Mature: 43786
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERFDAIIIGAGAAGMFCSALAGQAGRRVLLIDNGKKPGRKILMSGGGRCNFTNLYVEPG CCCCCEEEEECCHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCCEEEEEEEEECCC AYLSQNPHFCKSALARFTQWDFIDLVNKHGITWHEKTLGQLFCDDSAQQIVDMLVDECEK CCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCEEHHHHHHHHHCCCHHHHHHHHHHHHCCC GNVTFRLRSEVLSVAKDETGFTLELNGMTVGCEKLVIATGGLSMPGLGASPFGYKIAEQF CCEEEEEHHHHHHHHCCCCCEEEEECCEEECCEEEEEEECCCCCCCCCCCCCCHHHHHHH GLNVLPTRAGLVPFTLHKPLLEELQVLAGVAVPSVITAENGTVFRENLLFTHRGLSGPAV CCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEECCEEEEECCCCCCEE LQISSYWQPGEFVSINLLPDVDLETFLNEQRNAHPNQSLKNTLAVHLPKRLVERLQQLGQ EEEECCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC IPDVSLKQLNVRDQQALISTLTDWRVQPNGTEGYRTAEVTLGGVDTNELSSRTMEARKVP CCCCCHHHCCCHHHHHHHHHHHHCEECCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCC GLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQDLIAAKSS CEEEHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCC >Mature Secondary Structure MERFDAIIIGAGAAGMFCSALAGQAGRRVLLIDNGKKPGRKILMSGGGRCNFTNLYVEPG CCCCCEEEEECCHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCCEEEEEEEEECCC AYLSQNPHFCKSALARFTQWDFIDLVNKHGITWHEKTLGQLFCDDSAQQIVDMLVDECEK CCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCEEHHHHHHHHHCCCHHHHHHHHHHHHCCC GNVTFRLRSEVLSVAKDETGFTLELNGMTVGCEKLVIATGGLSMPGLGASPFGYKIAEQF CCEEEEEHHHHHHHHCCCCCEEEEECCEEECCEEEEEEECCCCCCCCCCCCCCHHHHHHH GLNVLPTRAGLVPFTLHKPLLEELQVLAGVAVPSVITAENGTVFRENLLFTHRGLSGPAV CCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEECCEEEEECCCCCCEE LQISSYWQPGEFVSINLLPDVDLETFLNEQRNAHPNQSLKNTLAVHLPKRLVERLQQLGQ EEEECCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC IPDVSLKQLNVRDQQALISTLTDWRVQPNGTEGYRTAEVTLGGVDTNELSSRTMEARKVP CCCCCHHHCCCHHHHHHHHHHHHCEECCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCC GLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQDLIAAKSS CEEEHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]