| Definition | Escherichia coli SMS-3-5 chromosome, complete genome. |
|---|---|
| Accession | NC_010498 |
| Length | 5,068,389 |
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The map label for this gene is yhiL [H]
Identifier: 170682687
GI number: 170682687
Start: 3844468
End: 3846120
Strand: Reverse
Name: yhiL [H]
Synonym: EcSMS35_3779
Alternate gene names: 170682687
Gene position: 3846120-3844468 (Counterclockwise)
Preceding gene: 170683730
Following gene: 170681068
Centisome position: 75.88
GC content: 33.7
Gene sequence:
>1653_bases ATGTCTTTCAGACATGTGTCATTTATTTTGTTACTAACAAGTCAAAAATATCACGGGTTATTTATGAAAGTATTTCACAA TATATTTAAGCACATCTCTTCAAACCATCAAGATAAGCATTCAGATAAAGTTAACAGTCATCAACACCATGGCAAGGTTG ATAAAAAACATCGTTCAAAGATAGTTGAAATTGATAAGCTGGATAAACATTTGCAAATAGATAACGATTTTGGCCTGCAT ATCATCTATTTCCTGCAACATGGCTGCTGGAACGTAACTGAACATAGTTCTCAGATAGAAAAAATATGGTTTTACAATAG TGAGCCATCTATAGATATTAAAGAATATAATAGTTTCGCCGATAATACTACTGACACGTTTATCTTTACAATTATACCAG ACAATAACCATGTGATAAAATTATCGTCTCCCATTACCGTTACGATTGAGCGTAAGGACGGTTATTATTTTATTAATTTC TCCGGGGATAAATCAGACATAATTTATAAAGTTGATGGGTTTTCTATCATAGAGAGAAATTTCTTTACTCTTCTTAGTGG TAATTTCAAACCTGACTGGCGTTGGGCTGTCTCTAAAGAGACGTTTACTAAGGAAAAGTTTGATAGCTATGTTGAATCTG TTTTTTCAAAAATAGACTTTTATAAACAGTGTGGTGTAATTAACCCACAAAATCCCAACACGGCTTATTTTGGCGATACA GATGGAAGAGTGGGCGCTGTACTTTATGCATTGCTCGTTTCAGGGCATATAGGCATCAGGGAAAAGGGGTGGAGTTTATT ATGTGAATTATTAAAACACGAAGACATGGCTTCATTCGCATATGAAAATAAAAAATTGAAAAAACTCTTTACTTTATTAG ATACGAGAGACATGATCTTGAATGAGTTGCATCAACATGTTTTTTTAAAAGGCGATGCGATTACCCCTTGTATCTTCCTT GGGGATCATACAGGCGATAGATTTAGTACTATTTTTGGTGATAAATATATCCTTACTTTGCTAAATTCTATGCGAAATAT GGAGGGTAATAAAGATAGTCGTATAAATAAAAATGTCGTCGTTCTGGCTGGAAATCATGAAATCAATTTTAATGGTAACT ATAGTGCACGACTAGCAAATCATAAACTCTCTTCCGGTGATACATATAACTTAATTAAAACGCTCGATGTTTGTAATTAT GACTCAGAAACGAAAGTTTTAACCAGTCATCACGGAATAATAAGAAATGAAGAAAATGAATGTTATTGTCTAGGTGCTTT GCAGGTTCCATTTAATCAGATGAAAGACCCAATTGATCCTGAGGAATTAGCAAATATATTTAATAAAAAACATAAACAAC ACATGGATGATCGTCTTATCCATCTAATTAGAAGCAATGCTATAGCATCCACACCTGTATATGACAATTATTTTAATAAC ACTACTGCTTTCAGACCAAAACCTGAAGATATCTTCAAATGTGGACAGACGCTCAAAAAAAGTAAACAGAAATATGGCCA TTATGGATTAGGGGTAGATCAGCATCAAAAAATTGATAATTATACCATGGGGCTAAATTCCTGGAAGATAGCACCTAACG AACGTGGTGATAAAAAAGGTGTCCCAGGGCTTAGTTGTTTTCAAGCACATTAA
Upstream 100 bases:
>100_bases CAGGGAGGGATTCTTTTTCATTATTTGGTAAAAGACCGGATGGTATCGGTGCTTAAAATCATCGAACATATAAGTATTAT TGCTTTGTATCATCGTAAAT
Downstream 100 bases:
>100_bases AACTCCATGAGTGCTGTGGTATGTCTTTTTAATCCTGCCAGTATTTCATAGTTTTTCTTAATCGATTGTAGAGGCATGTA CTGATGACGCCTCTACAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 550; Mature: 549
Protein sequence:
>550_residues MSFRHVSFILLLTSQKYHGLFMKVFHNIFKHISSNHQDKHSDKVNSHQHHGKVDKKHRSKIVEIDKLDKHLQIDNDFGLH IIYFLQHGCWNVTEHSSQIEKIWFYNSEPSIDIKEYNSFADNTTDTFIFTIIPDNNHVIKLSSPITVTIERKDGYYFINF SGDKSDIIYKVDGFSIIERNFFTLLSGNFKPDWRWAVSKETFTKEKFDSYVESVFSKIDFYKQCGVINPQNPNTAYFGDT DGRVGAVLYALLVSGHIGIREKGWSLLCELLKHEDMASFAYENKKLKKLFTLLDTRDMILNELHQHVFLKGDAITPCIFL GDHTGDRFSTIFGDKYILTLLNSMRNMEGNKDSRINKNVVVLAGNHEINFNGNYSARLANHKLSSGDTYNLIKTLDVCNY DSETKVLTSHHGIIRNEENECYCLGALQVPFNQMKDPIDPEELANIFNKKHKQHMDDRLIHLIRSNAIASTPVYDNYFNN TTAFRPKPEDIFKCGQTLKKSKQKYGHYGLGVDQHQKIDNYTMGLNSWKIAPNERGDKKGVPGLSCFQAH
Sequences:
>Translated_550_residues MSFRHVSFILLLTSQKYHGLFMKVFHNIFKHISSNHQDKHSDKVNSHQHHGKVDKKHRSKIVEIDKLDKHLQIDNDFGLH IIYFLQHGCWNVTEHSSQIEKIWFYNSEPSIDIKEYNSFADNTTDTFIFTIIPDNNHVIKLSSPITVTIERKDGYYFINF SGDKSDIIYKVDGFSIIERNFFTLLSGNFKPDWRWAVSKETFTKEKFDSYVESVFSKIDFYKQCGVINPQNPNTAYFGDT DGRVGAVLYALLVSGHIGIREKGWSLLCELLKHEDMASFAYENKKLKKLFTLLDTRDMILNELHQHVFLKGDAITPCIFL GDHTGDRFSTIFGDKYILTLLNSMRNMEGNKDSRINKNVVVLAGNHEINFNGNYSARLANHKLSSGDTYNLIKTLDVCNY DSETKVLTSHHGIIRNEENECYCLGALQVPFNQMKDPIDPEELANIFNKKHKQHMDDRLIHLIRSNAIASTPVYDNYFNN TTAFRPKPEDIFKCGQTLKKSKQKYGHYGLGVDQHQKIDNYTMGLNSWKIAPNERGDKKGVPGLSCFQAH >Mature_549_residues SFRHVSFILLLTSQKYHGLFMKVFHNIFKHISSNHQDKHSDKVNSHQHHGKVDKKHRSKIVEIDKLDKHLQIDNDFGLHI IYFLQHGCWNVTEHSSQIEKIWFYNSEPSIDIKEYNSFADNTTDTFIFTIIPDNNHVIKLSSPITVTIERKDGYYFINFS GDKSDIIYKVDGFSIIERNFFTLLSGNFKPDWRWAVSKETFTKEKFDSYVESVFSKIDFYKQCGVINPQNPNTAYFGDTD GRVGAVLYALLVSGHIGIREKGWSLLCELLKHEDMASFAYENKKLKKLFTLLDTRDMILNELHQHVFLKGDAITPCIFLG DHTGDRFSTIFGDKYILTLLNSMRNMEGNKDSRINKNVVVLAGNHEINFNGNYSARLANHKLSSGDTYNLIKTLDVCNYD SETKVLTSHHGIIRNEENECYCLGALQVPFNQMKDPIDPEELANIFNKKHKQHMDDRLIHLIRSNAIASTPVYDNYFNNT TAFRPKPEDIFKCGQTLKKSKQKYGHYGLGVDQHQKIDNYTMGLNSWKIAPNERGDKKGVPGLSCFQAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789902, Length=425, Percent_Identity=33.6470588235294, Blast_Score=232, Evalue=4e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63461; Mature: 63329
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFRHVSFILLLTSQKYHGLFMKVFHNIFKHISSNHQDKHSDKVNSHQHHGKVDKKHRSK CCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHCCCCCHHHHHH IVEIDKLDKHLQIDNDFGLHIIYFLQHGCWNVTEHSSQIEKIWFYNSEPSIDIKEYNSFA EEEHHHCCCCEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEHHHHCCCC DNTTDTFIFTIIPDNNHVIKLSSPITVTIERKDGYYFINFSGDKSDIIYKVDGFSIIERN CCCCCEEEEEEEECCCCEEEECCCEEEEEEECCCEEEEEECCCCCCEEEEECCCHHHHHC FFTLLSGNFKPDWRWAVSKETFTKEKFDSYVESVFSKIDFYKQCGVINPQNPNTAYFGDT CHHEECCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCC DGRVGAVLYALLVSGHIGIREKGWSLLCELLKHEDMASFAYENKKLKKLFTLLDTRDMIL CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH NELHQHVFLKGDAITPCIFLGDHTGDRFSTIFGDKYILTLLNSMRNMEGNKDSRINKNVV HHHHHHEEEECCCCCCEEEEECCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEE VLAGNHEINFNGNYSARLANHKLSSGDTYNLIKTLDVCNYDSETKVLTSHHGIIRNEENE EEECCEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEECCCCCEECCCCC CYCLGALQVPFNQMKDPIDPEELANIFNKKHKQHMDDRLIHLIRSNAIASTPVYDNYFNN EEEEEEEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC TTAFRPKPEDIFKCGQTLKKSKQKYGHYGLGVDQHQKIDNYTMGLNSWKIAPNERGDKKG CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCEEECCCCEEECCCCCCCCCC VPGLSCFQAH CCCCCCCCCC >Mature Secondary Structure SFRHVSFILLLTSQKYHGLFMKVFHNIFKHISSNHQDKHSDKVNSHQHHGKVDKKHRSK CCCEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHCCCCCHHHHHH IVEIDKLDKHLQIDNDFGLHIIYFLQHGCWNVTEHSSQIEKIWFYNSEPSIDIKEYNSFA EEEHHHCCCCEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEHHHHCCCC DNTTDTFIFTIIPDNNHVIKLSSPITVTIERKDGYYFINFSGDKSDIIYKVDGFSIIERN CCCCCEEEEEEEECCCCEEEECCCEEEEEEECCCEEEEEECCCCCCEEEEECCCHHHHHC FFTLLSGNFKPDWRWAVSKETFTKEKFDSYVESVFSKIDFYKQCGVINPQNPNTAYFGDT CHHEECCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCC DGRVGAVLYALLVSGHIGIREKGWSLLCELLKHEDMASFAYENKKLKKLFTLLDTRDMIL CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH NELHQHVFLKGDAITPCIFLGDHTGDRFSTIFGDKYILTLLNSMRNMEGNKDSRINKNVV HHHHHHEEEECCCCCCEEEEECCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEE VLAGNHEINFNGNYSARLANHKLSSGDTYNLIKTLDVCNYDSETKVLTSHHGIIRNEENE EEECCEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEECCCCCEECCCCC CYCLGALQVPFNQMKDPIDPEELANIFNKKHKQHMDDRLIHLIRSNAIASTPVYDNYFNN EEEEEEEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC TTAFRPKPEDIFKCGQTLKKSKQKYGHYGLGVDQHQKIDNYTMGLNSWKIAPNERGDKKG CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCEEECCCCEEECCCCCCCCCC VPGLSCFQAH CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]