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The map label for this gene is ybeT [H]

Identifier: 170683560

GI number: 170683560

Start: 679457

End: 680011

Strand: Reverse

Name: ybeT [H]

Synonym: EcSMS35_0668

Alternate gene names: 170683560

Gene position: 680011-679457 (Counterclockwise)

Preceding gene: 170683933

Following gene: 170682713

Centisome position: 13.42

GC content: 43.24

Gene sequence:

>555_bases
ATGAATAAAAAATTAATGTATATATTCGCAATATTTATAGTTGCAGCAATAACCTGTATTAGCCAACCCAAGAAAACGAC
GTTGCGTGATAAAGCCATGGCGAATTATGCCTTTGATTATTTAAGCTCACCGGGCAGTCTTCCATTCACCACGGCAGCCA
CGGAGCTTTCCGCGATTCATGGTCACTCAACGTCGCAATATCGCCTTGGAGAATTTTATCTTCATGGTAGCGACGGTAAA
CCACTGGATTATACACAGGCGAGATACTGGTATGAGCAATCAGCGGAACAGGAAAATCCACGCGCGCAAAGTAAACTGGG
GTGGATCTACCTCAAAGGTCTGGGGGTCAAACCCGATACCCGTAAAGCAATTCTCTGGTATAAGGAAGCAGCTGAACAAG
GGTATGCTCATGCTCAATATACTTTAGGTTTGATCTACAGAAACGGCTCAGGTATTAATGTTAACCATTATGAATCTCAA
AAATGGTTAAAACTGGCCGCCAAACAACATTACAAAAACGCGGAAAGATTACTTGCCGGGCTTCCCGCACATTAA

Upstream 100 bases:

>100_bases
TGTTAATAATCCCTTATGTGCATTAACTGACTACTTTTTTATTATTGATGAGTATAAACTTGACGCTTTCAAAATAAAAA
GAAAATCGAAGCATTCACTC

Downstream 100 bases:

>100_bases
CGTCGACTGTCACCCGAACAGATGGAGTATTTTCCCTATCAAACCGGCAAAGATAAAAATGTAGAAAATAATTTTGATGA
CGCCCAGGCAGCCCGGCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MNKKLMYIFAIFIVAAITCISQPKKTTLRDKAMANYAFDYLSSPGSLPFTTAATELSAIHGHSTSQYRLGEFYLHGSDGK
PLDYTQARYWYEQSAEQENPRAQSKLGWIYLKGLGVKPDTRKAILWYKEAAEQGYAHAQYTLGLIYRNGSGINVNHYESQ
KWLKLAAKQHYKNAERLLAGLPAH

Sequences:

>Translated_184_residues
MNKKLMYIFAIFIVAAITCISQPKKTTLRDKAMANYAFDYLSSPGSLPFTTAATELSAIHGHSTSQYRLGEFYLHGSDGK
PLDYTQARYWYEQSAEQENPRAQSKLGWIYLKGLGVKPDTRKAILWYKEAAEQGYAHAQYTLGLIYRNGSGINVNHYESQ
KWLKLAAKQHYKNAERLLAGLPAH
>Mature_184_residues
MNKKLMYIFAIFIVAAITCISQPKKTTLRDKAMANYAFDYLSSPGSLPFTTAATELSAIHGHSTSQYRLGEFYLHGSDGK
PLDYTQARYWYEQSAEQENPRAQSKLGWIYLKGLGVKPDTRKAILWYKEAAEQGYAHAQYTLGLIYRNGSGINVNHYESQ
KWLKLAAKQHYKNAERLLAGLPAH

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeQ [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=132, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=4e-13,
Organism=Escherichia coli, GI1786867, Length=184, Percent_Identity=98.9130434782609, Blast_Score=379, Evalue=1e-107,
Organism=Escherichia coli, GI87081769, Length=127, Percent_Identity=36.2204724409449, Blast_Score=75, Evalue=3e-15,
Organism=Drosophila melanogaster, GI21355295, Length=114, Percent_Identity=35.9649122807018, Blast_Score=76, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 20857; Mature: 20857

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKLMYIFAIFIVAAITCISQPKKTTLRDKAMANYAFDYLSSPGSLPFTTAATELSAIH
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHC
GHSTSQYRLGEFYLHGSDGKPLDYTQARYWYEQSAEQENPRAQSKLGWIYLKGLGVKPDT
CCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCHHCCCEEEEEECCCCCCC
RKAILWYKEAAEQGYAHAQYTLGLIYRNGSGINVNHYESQKWLKLAAKQHYKNAERLLAG
CCEEEEEHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
LPAH
CCCC
>Mature Secondary Structure
MNKKLMYIFAIFIVAAITCISQPKKTTLRDKAMANYAFDYLSSPGSLPFTTAATELSAIH
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHC
GHSTSQYRLGEFYLHGSDGKPLDYTQARYWYEQSAEQENPRAQSKLGWIYLKGLGVKPDT
CCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCHHCCCEEEEEECCCCCCC
RKAILWYKEAAEQGYAHAQYTLGLIYRNGSGINVNHYESQKWLKLAAKQHYKNAERLLAG
CCEEEEEHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
LPAH
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]