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The map label for this gene is ybeQ [H]

Identifier: 170682713

GI number: 170682713

Start: 676175

End: 677152

Strand: Reverse

Name: ybeQ [H]

Synonym: EcSMS35_0664

Alternate gene names: 170682713

Gene position: 677152-676175 (Counterclockwise)

Preceding gene: 170683560

Following gene: 170683771

Centisome position: 13.36

GC content: 46.63

Gene sequence:

>978_bases
ATGATTTTTACGTCAAGTTGCTGCGATAATTTATCAATAGAAAAGATTGTTAAACGTGCTGAAAAAGGCGATAGCGAGGC
TCAATATATTGTTGGGTTTTATTATAATCGCGATAGCGCAATTGACTCTCCGGACGACGAAAAAGCCTTCTACTGGCTGA
AGCTTGCCGCTGAACAAGGCCATTGTGAAGCACAATATTCCTTAGGGCGGAAATACTCCGAGGATAAAAGCCGTCATAAA
GATAATGAGCAAGCCATCTTTTGGCTGAAAAAAGCTGCCCTACAAGGCCATACTTTCGCTTCCAACGCCCTTGGCTGGAT
ACTGGATCGTGGAGAAGACCCCAACTATAAAGAAGCGGTTGCCTGGTATCAGATAGCCGCGGAGAGCGGAATGCCTTATG
CGCAAAATAATCTTGGATGGATGTACAGAAATGGTAACGGAGTCGCACAAGACTATGCGCTGGCATTTTTCTGGTACAAA
CAAGCTGCATTACAAGGCCATAGTTACGCGCAAGACAACCTGGCCGATCTCTATAAAGACGGAGAAGGCGTTGCTCAAAA
CAAGACACTCGCCGCATTCTGGTATTTGAAAAGCGCACAGCAGGGTAATCGGCATGCCCAGTTTCAAATTGCATGGGATT
ATAACGCTGGCGAAGGGGTGGACCAGGACTATAAGCAAGCGATGTACTGGTATCTGAAGGCTGCCGCTCAGGAAAGCGTC
GGCGCTTACGTCAACATCGGTTATATGTATAAACATGGACAAGGCGTTGAGAAAGATTATCAGGCCGCCTTTGAATGGTT
TATGAAAGCCGCTGAATGCAATGACGCCACTGCCTGGTATAACCTGGCCATTATGTATCACTACGGAGAAGGAAGACCTG
TCGATCTCCGACAGGCTCTCGACCTGTATCGTAAAGTTCAGGCATCCGGTACCAGGGATGTCAGTCAAGAAATCCGTGAG
ATTGAAGATTTACTGTAA

Upstream 100 bases:

>100_bases
ACTTTTCTGACGCAACATAATACGCATAAAATAAGGCTTACGCAAAAATGGAACACATAAAAATATAATATGTTTTATAT
GCAACCATAAGGAAATGATA

Downstream 100 bases:

>100_bases
GAGATAAAAACAAGGGCCGGGGAATTTTATTCGGCCCATATTCTCTTTATTGCTGTGCGAAATCAGACCATTAAGGCTCG
AACGGGCGTCTCTGGAACTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MIFTSSCCDNLSIEKIVKRAEKGDSEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYSLGRKYSEDKSRHK
DNEQAIFWLKKAALQGHTFASNALGWILDRGEDPNYKEAVAWYQIAAESGMPYAQNNLGWMYRNGNGVAQDYALAFFWYK
QAALQGHSYAQDNLADLYKDGEGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQESV
GAYVNIGYMYKHGQGVEKDYQAAFEWFMKAAECNDATAWYNLAIMYHYGEGRPVDLRQALDLYRKVQASGTRDVSQEIRE
IEDLL

Sequences:

>Translated_325_residues
MIFTSSCCDNLSIEKIVKRAEKGDSEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYSLGRKYSEDKSRHK
DNEQAIFWLKKAALQGHTFASNALGWILDRGEDPNYKEAVAWYQIAAESGMPYAQNNLGWMYRNGNGVAQDYALAFFWYK
QAALQGHSYAQDNLADLYKDGEGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQESV
GAYVNIGYMYKHGQGVEKDYQAAFEWFMKAAECNDATAWYNLAIMYHYGEGRPVDLRQALDLYRKVQASGTRDVSQEIRE
IEDLL
>Mature_325_residues
MIFTSSCCDNLSIEKIVKRAEKGDSEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYSLGRKYSEDKSRHK
DNEQAIFWLKKAALQGHTFASNALGWILDRGEDPNYKEAVAWYQIAAESGMPYAQNNLGWMYRNGNGVAQDYALAFFWYK
QAALQGHSYAQDNLADLYKDGEGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQESV
GAYVNIGYMYKHGQGVEKDYQAAFEWFMKAAECNDATAWYNLAIMYHYGEGRPVDLRQALDLYRKVQASGTRDVSQEIRE
IEDLL

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=311, Percent_Identity=28.9389067524116, Blast_Score=105, Evalue=8e-23,
Organism=Homo sapiens, GI151301150, Length=324, Percent_Identity=29.6296296296296, Blast_Score=99, Evalue=4e-21,
Organism=Escherichia coli, GI87081769, Length=325, Percent_Identity=93.8461538461538, Blast_Score=631, Evalue=0.0,
Organism=Escherichia coli, GI1786867, Length=123, Percent_Identity=36.5853658536585, Blast_Score=74, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17563256, Length=309, Percent_Identity=25.2427184466019, Blast_Score=93, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6319410, Length=284, Percent_Identity=29.2253521126761, Blast_Score=84, Evalue=2e-17,
Organism=Drosophila melanogaster, GI21355295, Length=311, Percent_Identity=28.9389067524116, Blast_Score=102, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 37212; Mature: 37212

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFTSSCCDNLSIEKIVKRAEKGDSEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQG
CEECCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCC
HCEAQYSLGRKYSEDKSRHKDNEQAIFWLKKAALQGHTFASNALGWILDRGEDPNYKEAV
CCHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCHHHCCHHHEEECCCCCCHHHHH
AWYQIAAESGMPYAQNNLGWMYRNGNGVAQDYALAFFWYKQAALQGHSYAQDNLADLYKD
HHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC
GEGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQESV
CCCCCCCCEEEEEEEEHHHCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCC
GAYVNIGYMYKHGQGVEKDYQAAFEWFMKAAECNDATAWYNLAIMYHYGEGRPVDLRQAL
CCEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCHHHHH
DLYRKVQASGTRDVSQEIREIEDLL
HHHHHHHCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MIFTSSCCDNLSIEKIVKRAEKGDSEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQG
CEECCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCC
HCEAQYSLGRKYSEDKSRHKDNEQAIFWLKKAALQGHTFASNALGWILDRGEDPNYKEAV
CCHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCHHHCCHHHEEECCCCCCHHHHH
AWYQIAAESGMPYAQNNLGWMYRNGNGVAQDYALAFFWYKQAALQGHSYAQDNLADLYKD
HHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC
GEGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQESV
CCCCCCCCEEEEEEEEHHHCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCC
GAYVNIGYMYKHGQGVEKDYQAAFEWFMKAAECNDATAWYNLAIMYHYGEGRPVDLRQAL
CCEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCHHHHH
DLYRKVQASGTRDVSQEIREIEDLL
HHHHHHHCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]