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The map label for this gene is csgC [H]

Identifier: 170683039

GI number: 170683039

Start: 2102004

End: 2102336

Strand: Reverse

Name: csgC [H]

Synonym: EcSMS35_2088

Alternate gene names: 170683039

Gene position: 2102336-2102004 (Counterclockwise)

Preceding gene: 170679882

Following gene: 170683875

Centisome position: 41.48

GC content: 43.54

Gene sequence:

>333_bases
ATGAATGCGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATATGTACACCAT
TATTCCTGAAGTCACTCTTACTCAATCTTGTCTGTGCAGAGTACAAATATTGTCCCTGCGCGAAGGCAGTTCAGGGCAAA
GTCAGACGAAGCAAGAAAAGACCCTCTCATTGCCTGCTAATCAACCCATTGCTTTGACGAAGTTGAGTTTAAATATTTCC
CCGGACGATCGGGTGAAAATAGTTGTTACTGTTTCTGATGGACAGTCACTTCATTTATCACAACAATGGCCGCCCTCTTC
AGGAAAGTCTTAA

Upstream 100 bases:

>100_bases
TCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACACATCTGTATTAAAGAAACAGGGCGCAAGCCCTG
TTTTTTTTCGGGAGAAGAAT

Downstream 100 bases:

>100_bases
TTTGTTGAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACA
CAACCCTCAAGGATGACTAA

Product: putative autoagglutination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MNALLLLAALSSQITFNTTQQGDMYTIIPEVTLTQSCLCRVQILSLREGSSGQSQTKQEKTLSLPANQPIALTKLSLNIS
PDDRVKIVVTVSDGQSLHLSQQWPPSSGKS

Sequences:

>Translated_110_residues
MNALLLLAALSSQITFNTTQQGDMYTIIPEVTLTQSCLCRVQILSLREGSSGQSQTKQEKTLSLPANQPIALTKLSLNIS
PDDRVKIVVTVSDGQSLHLSQQWPPSSGKS
>Mature_110_residues
MNALLLLAALSSQITFNTTQQGDMYTIIPEVTLTQSCLCRVQILSLREGSSGQSQTKQEKTLSLPANQPIALTKLSLNIS
PDDRVKIVVTVSDGQSLHLSQQWPPSSGKS

Specific function: Plays a role in the extracellular assembly of CsgA into thin aggregative fimbriae (Tafi) fibers. Assembly may also require CsgE. Tafi are thought to be assembled via an extracellular nucleation-precipitation (ENP) pathway, and possibly also via an intrace

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CsgC/AgfC family [H]

Homologues:

Organism=Escherichia coli, GI1787280, Length=110, Percent_Identity=97.2727272727273, Blast_Score=195, Evalue=6e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014491 [H]

Pfam domain/function: PF10610 Tafi-CsgC [H]

EC number: NA

Molecular weight: Translated: 11897; Mature: 11897

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNALLLLAALSSQITFNTTQQGDMYTIIPEVTLTQSCLCRVQILSLREGSSGQSQTKQEK
CCCEEEEEECCCCEEEECCCCCCEEEEECCCCCCHHHHEEEEEEEECCCCCCCCCCCCCC
TLSLPANQPIALTKLSLNISPDDRVKIVVTVSDGQSLHLSQQWPPSSGKS
EEECCCCCCEEEEEEEEEECCCCCEEEEEEECCCCEEEECCCCCCCCCCC
>Mature Secondary Structure
MNALLLLAALSSQITFNTTQQGDMYTIIPEVTLTQSCLCRVQILSLREGSSGQSQTKQEK
CCCEEEEEECCCCEEEECCCCCCEEEEECCCCCCHHHHEEEEEEEECCCCCCCCCCCCCC
TLSLPANQPIALTKLSLNISPDDRVKIVVTVSDGQSLHLSQQWPPSSGKS
EEECCCCCCEEEEEEEEEECCCCCEEEEEEECCCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA