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The map label for this gene is ymdA [H]

Identifier: 170683875

GI number: 170683875

Start: 2101572

End: 2101727

Strand: Reverse

Name: ymdA [H]

Synonym: EcSMS35_2087

Alternate gene names: 170683875

Gene position: 2101727-2101572 (Counterclockwise)

Preceding gene: 170683039

Following gene: 170681971

Centisome position: 41.47

GC content: 42.31

Gene sequence:

>156_bases
ATGAACTGCCCACAGAATGGCTCTGTTCCGGGCAGAACCTATTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGC
GCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAAGCTGGCTGTAATGAACATCGAATATAACTAA

Upstream 100 bases:

>100_bases
TGCCATCGCAGGAAGCACCGCGCAAGGGGGCGTGATCCACTTTTATGGCCAAATTGTGGAACCGGCATGTGACGTCAGCA
CCCAGTCAACACCCGTAGAA

Downstream 100 bases:

>100_bases
GTTTCTGAACAACTCACCTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACAAGAAGG
TGTAAGGAGGCGTTATGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 51; Mature: 51

Protein sequence:

>51_residues
MNCPQNGSVPGRTYSSKALMSGNVKNAQIASVKVQYLDKQKKLAVMNIEYN

Sequences:

>Translated_51_residues
MNCPQNGSVPGRTYSSKALMSGNVKNAQIASVKVQYLDKQKKLAVMNIEYN
>Mature_51_residues
MNCPQNGSVPGRTYSSKALMSGNVKNAQIASVKVQYLDKQKKLAVMNIEYN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To the N-terminal of the fimA/papA family of fimbria proteins [H]

Homologues:

Organism=Escherichia coli, GI1787281, Length=51, Percent_Identity=96.078431372549, Blast_Score=103, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5619; Mature: 5619

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNCPQNGSVPGRTYSSKALMSGNVKNAQIASVKVQYLDKQKKLAVMNIEYN
CCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEEECCCCCCEEEEEEECC
>Mature Secondary Structure
MNCPQNGSVPGRTYSSKALMSGNVKNAQIASVKVQYLDKQKKLAVMNIEYN
CCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEEECCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]