| Definition | Escherichia coli SMS-3-5 chromosome, complete genome. |
|---|---|
| Accession | NC_010498 |
| Length | 5,068,389 |
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The map label for this gene is plsB [H]
Identifier: 170682968
GI number: 170682968
Start: 4601592
End: 4604075
Strand: Reverse
Name: plsB [H]
Synonym: EcSMS35_4503
Alternate gene names: 170682968
Gene position: 4604075-4601592 (Counterclockwise)
Preceding gene: 170683816
Following gene: 170679620
Centisome position: 90.84
GC content: 54.95
Gene sequence:
>2484_bases ATGACTTTCTGCTATCCTTGCCGCGCATTTGCATTATTAACCAGAGGCTTTACATCGTTTATGTCCGGCTGGCCACGAAT TTACTACAAATTACTGAATTTACCATTAAGCATCCTGGTAAAAAGCAAGTCTATTCCGGCAGATCCTGCCCCGGAACTGG GGCTGGATACCTCTCGTCCAATTATGTACGTTTTACCGTACAACTCGAAAGCTGACTTGCTGACGTTGCGCGCCCAGTGT CTGGCACATGACCTGCCTGACCCGTTAGAGCCGCTGGAAATCGACGGCACGCTACTGCCGCGCTATGTGTTCATTCACGG CGGGCCGCGTGTGTTCACCTATTACACGCCGAAAGAAGAGTCTATTAAGCTGTTCCACGACTATCTCGATTTGCACCGTA GCAACCCAAATCTGGATGTGCAGATGGTGCCAGTATCGGTGATGTTTGGTCGCGCGCCGGGGCGTGAAAAAGGCGAAGTG AACCCGCCGCTGCGTATGCTTAACGGCGTACAGAAATTTTTCGCTGTACTGTGGCTCGGTCGCGACAGTTTTGTGCGTTT CTCGCCGTCAGTTTCGCTGCGCCGTATGGCGGATGAACACGGCACGGATAAAACTATCGCGCAGAAACTGGCGCGCGTGG CGCGTATGCACTTTGCCCGTCAACGTCTGGCTGCCGTAGGCCCACGTCTGCCTGCTCGTCAGGATCTGTTTAATAAGCTG CTCGCCTCCCGCGCCATTGCCAAAGCGGTAGAAGATGAAGCGCGCAGCAAAAAAATCTCCCATGAAAAAGCGCAGCAGAA CGCGATTGTGCTGATGGAAGAGATTGCGGCGAATTTCTCTTACGAGATGATCCGCCTGACTGACCGCATTCTGGGCTTCA CCTGGAACCGCCTTTACCAGGGTATCAACGTCCATAACGCCGAGCGCGTTCGCCAGTTGGCCCACGACGGTCATGAGCTG GTGTATGTGCCTTGCCACCGCAGTCACATGGACTACCTGCTGCTTTCTTACGTGCTGTATCACCAGGGGCTGGTGCCGCC GCATATCGCCGCCGGGATCAACCTGAACTTCTGGCCGGCCGGGCCGATTTTCCGCCGTCTGGGTGCGTTCTTTATTCGCC GTACGTTTAAAGGCAATAAGCTCTATTCCACCGTTTTCCGTGAGTATCTCGGCGAACTGTTCAGCCGTGGTTATTCCGTC GAGTATTTCGTGGAAGGCGGTCGTTCCCGTACGGGGCGTTTGCTGGATCCGAAAACCGGTACGCTGTCGATGACCATTCA GGCGATGCTGCGTGGCGGCACGCGTCCGATTACGCTGATTCCGATCTATATCGGTTATGAGCACGTCATGGAAGTGGGTA CTTACGCCAAAGAACTGCGCGGTGCAACGAAAGAGAAAGAGAGCCTGCCGCAGATGCTGCGCGGTTTAAGCAAGCTGCGT AATCTCGGTCAGGGTTACGTCAACTTCGGTGAACCAATGCCGTTGATGACCTACCTTAACCAGCACGTACCAGACTGGCG TGAATCTATCGATCCCATCGAAGCGGTGCGTCCGGCCTGGTTAACGCCGACGGTCAATAATATTGCTGCCGATCTGATGG TACGCATTAACAACGCAGGCGCGGCAAACGCCATGAACCTGTGCTGTACTGCGCTACTGGCGTCACGTCAGCGCTCACTC ACCCGCGAGCAGTTAACCGAGCAACTCAACTGCTACCTGGATCTGATGCGCAACGTACCTTACTCCACGGACTCTACCGT TCCTTCAGCCAGCGCCAGCGAGCTTATCGATCACGCGCTGCAAATGAACAAGTTTGAAGTCGAGAAAGACACTATCGGCG ACATCATCATTCTGCCGCGCGAGCAAGCGGTGTTGATGACCTACTATCGCAACAACATTGCGCATATGTTGGTGCTGCCT TCGCTGATGGCGGCAATTGTCACTCAGCATCGCCACATCTCCCGCGACGTATTGATGGAGCACGTCAATGTGCTTTACCC AATGCTGAAAGCGGAGCTGTTCCTGCGCTGGGATCGCGACGAATTGCCAGACGTTATTGATGCGCTGGCAAATGAGATGC AACGTCAGGGGCTGATTACCCTGCAAGATGATGAGTTGCATATCAACCCGGCGCATTCTCGCACGCTACAGCTGCTGGCC GCAGGCGCGCGCGAAACGCTGCAACGTTATGCCATTACCTTCTGGCTGTTGAGCGCCAACCCGTCGATCAACCGCGGTAC GCTGGAAAAAGAGAGCCGCACCGTCGCGCAACGTCTCTCCGTGCTGCACGGTATCAACGCGCCGGAGTTCTTCGACAAAG CGGTGTTCAGTTCGCTGGTGCTGACGCTGCGTGATGAAGGGTATATCAGCGATAGCGGCGATGCCGAACCGGCAGAAACG ATGAAGGTTTATCAGTTGCTGGCGGAGTTGATTACATCAGACGTGCGTTTGACGATTGAGAGTGCGACGCAGGGCGAGGG GTAA
Upstream 100 bases:
>100_bases TTTTTACATTATGAGCGTCAATATCAGTGTACCGTTAAATCCGATGATTCGGGTTTGCGTAACGCCGCGCGAAACATGAG CGGATACCACAGAATTTCCC
Downstream 100 bases:
>100_bases TCAGTGAGAATTGCCGGATGCGGCTCAAACGCCTTATCCGGCCTTCCATGATCTGCAAATTCAATAAATTGCGATCTGTT GTGTAGGCCTGAGAAGCGCA
Product: glycerol-3-phosphate acyltransferase
Products: NA
Alternate protein names: GPAT [H]
Number of amino acids: Translated: 827; Mature: 826
Protein sequence:
>827_residues MTFCYPCRAFALLTRGFTSFMSGWPRIYYKLLNLPLSILVKSKSIPADPAPELGLDTSRPIMYVLPYNSKADLLTLRAQC LAHDLPDPLEPLEIDGTLLPRYVFIHGGPRVFTYYTPKEESIKLFHDYLDLHRSNPNLDVQMVPVSVMFGRAPGREKGEV NPPLRMLNGVQKFFAVLWLGRDSFVRFSPSVSLRRMADEHGTDKTIAQKLARVARMHFARQRLAAVGPRLPARQDLFNKL LASRAIAKAVEDEARSKKISHEKAQQNAIVLMEEIAANFSYEMIRLTDRILGFTWNRLYQGINVHNAERVRQLAHDGHEL VYVPCHRSHMDYLLLSYVLYHQGLVPPHIAAGINLNFWPAGPIFRRLGAFFIRRTFKGNKLYSTVFREYLGELFSRGYSV EYFVEGGRSRTGRLLDPKTGTLSMTIQAMLRGGTRPITLIPIYIGYEHVMEVGTYAKELRGATKEKESLPQMLRGLSKLR NLGQGYVNFGEPMPLMTYLNQHVPDWRESIDPIEAVRPAWLTPTVNNIAADLMVRINNAGAANAMNLCCTALLASRQRSL TREQLTEQLNCYLDLMRNVPYSTDSTVPSASASELIDHALQMNKFEVEKDTIGDIIILPREQAVLMTYYRNNIAHMLVLP SLMAAIVTQHRHISRDVLMEHVNVLYPMLKAELFLRWDRDELPDVIDALANEMQRQGLITLQDDELHINPAHSRTLQLLA AGARETLQRYAITFWLLSANPSINRGTLEKESRTVAQRLSVLHGINAPEFFDKAVFSSLVLTLRDEGYISDSGDAEPAET MKVYQLLAELITSDVRLTIESATQGEG
Sequences:
>Translated_827_residues MTFCYPCRAFALLTRGFTSFMSGWPRIYYKLLNLPLSILVKSKSIPADPAPELGLDTSRPIMYVLPYNSKADLLTLRAQC LAHDLPDPLEPLEIDGTLLPRYVFIHGGPRVFTYYTPKEESIKLFHDYLDLHRSNPNLDVQMVPVSVMFGRAPGREKGEV NPPLRMLNGVQKFFAVLWLGRDSFVRFSPSVSLRRMADEHGTDKTIAQKLARVARMHFARQRLAAVGPRLPARQDLFNKL LASRAIAKAVEDEARSKKISHEKAQQNAIVLMEEIAANFSYEMIRLTDRILGFTWNRLYQGINVHNAERVRQLAHDGHEL VYVPCHRSHMDYLLLSYVLYHQGLVPPHIAAGINLNFWPAGPIFRRLGAFFIRRTFKGNKLYSTVFREYLGELFSRGYSV EYFVEGGRSRTGRLLDPKTGTLSMTIQAMLRGGTRPITLIPIYIGYEHVMEVGTYAKELRGATKEKESLPQMLRGLSKLR NLGQGYVNFGEPMPLMTYLNQHVPDWRESIDPIEAVRPAWLTPTVNNIAADLMVRINNAGAANAMNLCCTALLASRQRSL TREQLTEQLNCYLDLMRNVPYSTDSTVPSASASELIDHALQMNKFEVEKDTIGDIIILPREQAVLMTYYRNNIAHMLVLP SLMAAIVTQHRHISRDVLMEHVNVLYPMLKAELFLRWDRDELPDVIDALANEMQRQGLITLQDDELHINPAHSRTLQLLA AGARETLQRYAITFWLLSANPSINRGTLEKESRTVAQRLSVLHGINAPEFFDKAVFSSLVLTLRDEGYISDSGDAEPAET MKVYQLLAELITSDVRLTIESATQGEG >Mature_826_residues TFCYPCRAFALLTRGFTSFMSGWPRIYYKLLNLPLSILVKSKSIPADPAPELGLDTSRPIMYVLPYNSKADLLTLRAQCL AHDLPDPLEPLEIDGTLLPRYVFIHGGPRVFTYYTPKEESIKLFHDYLDLHRSNPNLDVQMVPVSVMFGRAPGREKGEVN PPLRMLNGVQKFFAVLWLGRDSFVRFSPSVSLRRMADEHGTDKTIAQKLARVARMHFARQRLAAVGPRLPARQDLFNKLL ASRAIAKAVEDEARSKKISHEKAQQNAIVLMEEIAANFSYEMIRLTDRILGFTWNRLYQGINVHNAERVRQLAHDGHELV YVPCHRSHMDYLLLSYVLYHQGLVPPHIAAGINLNFWPAGPIFRRLGAFFIRRTFKGNKLYSTVFREYLGELFSRGYSVE YFVEGGRSRTGRLLDPKTGTLSMTIQAMLRGGTRPITLIPIYIGYEHVMEVGTYAKELRGATKEKESLPQMLRGLSKLRN LGQGYVNFGEPMPLMTYLNQHVPDWRESIDPIEAVRPAWLTPTVNNIAADLMVRINNAGAANAMNLCCTALLASRQRSLT REQLTEQLNCYLDLMRNVPYSTDSTVPSASASELIDHALQMNKFEVEKDTIGDIIILPREQAVLMTYYRNNIAHMLVLPS LMAAIVTQHRHISRDVLMEHVNVLYPMLKAELFLRWDRDELPDVIDALANEMQRQGLITLQDDELHINPAHSRTLQLLAA GARETLQRYAITFWLLSANPSINRGTLEKESRTVAQRLSVLHGINAPEFFDKAVFSSLVLTLRDEGYISDSGDAEPAETM KVYQLLAELITSDVRLTIESATQGEG
Specific function: De novo phospholipid biosynthesis; first step. [C]
COG id: COG2937
COG function: function code I; Glycerol-3-phosphate O-acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GPAT/DAPAT family [H]
Homologues:
Organism=Homo sapiens, GI7657134, Length=418, Percent_Identity=29.4258373205742, Blast_Score=150, Evalue=4e-36, Organism=Homo sapiens, GI190358539, Length=272, Percent_Identity=33.4558823529412, Blast_Score=134, Evalue=5e-31, Organism=Escherichia coli, GI87082362, Length=807, Percent_Identity=99.8760842627014, Blast_Score=1664, Evalue=0.0, Organism=Caenorhabditis elegans, GI71988723, Length=278, Percent_Identity=31.6546762589928, Blast_Score=143, Evalue=3e-34, Organism=Caenorhabditis elegans, GI25147672, Length=279, Percent_Identity=30.1075268817204, Blast_Score=139, Evalue=8e-33, Organism=Caenorhabditis elegans, GI71988728, Length=190, Percent_Identity=37.8947368421053, Blast_Score=134, Evalue=2e-31, Organism=Drosophila melanogaster, GI21357731, Length=499, Percent_Identity=25.4509018036072, Blast_Score=143, Evalue=5e-34, Organism=Drosophila melanogaster, GI24650752, Length=499, Percent_Identity=25.4509018036072, Blast_Score=143, Evalue=6e-34, Organism=Drosophila melanogaster, GI24650754, Length=499, Percent_Identity=25.4509018036072, Blast_Score=143, Evalue=6e-34, Organism=Drosophila melanogaster, GI17864692, Length=270, Percent_Identity=30.3703703703704, Blast_Score=142, Evalue=1e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR022284 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: =2.3.1.15 [H]
Molecular weight: Translated: 93726; Mature: 93594
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFCYPCRAFALLTRGFTSFMSGWPRIYYKLLNLPLSILVKSKSIPADPAPELGLDTSRP CCEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCC IMYVLPYNSKADLLTLRAQCLAHDLPDPLEPLEIDGTLLPRYVFIHGGPRVFTYYTPKEE EEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEECEEEEEECCCEEEEEECCCHH SIKLFHDYLDLHRSNPNLDVQMVPVSVMFGRAPGREKGEVNPPLRMLNGVQKFFAVLWLG HHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC RDSFVRFSPSVSLRRMADEHGTDKTIAQKLARVARMHFARQRLAAVGPRLPARQDLFNKL CCCCEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH LASRAIAKAVEDEARSKKISHEKAQQNAIVLMEEIAANFSYEMIRLTDRILGFTWNRLYQ HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC GINVHNAERVRQLAHDGHELVYVPCHRSHMDYLLLSYVLYHQGLVPPHIAAGINLNFWPA CCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCEECCCC GPIFRRLGAFFIRRTFKGNKLYSTVFREYLGELFSRGYSVEYFVEGGRSRTGRLLDPKTG CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEECCCCC TLSMTIQAMLRGGTRPITLIPIYIGYEHVMEVGTYAKELRGATKEKESLPQMLRGLSKLR HHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH NLGQGYVNFGEPMPLMTYLNQHVPDWRESIDPIEAVRPAWLTPTVNNIAADLMVRINNAG HCCCCCCCCCCCCHHHHHHHHCCCCHHHCCCHHHHCCCCCCCCCHHHHHHHHHEEECCCC AANAMNLCCTALLASRQRSLTREQLTEQLNCYLDLMRNVPYSTDSTVPSASASELIDHAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH QMNKFEVEKDTIGDIIILPREQAVLMTYYRNNIAHMLVLPSLMAAIVTQHRHISRDVLME HCCCEEECCCCCCCEEEECCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH HVNVLYPMLKAELFLRWDRDELPDVIDALANEMQRQGLITLQDDELHINPAHSRTLQLLA HHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHCCCEEEECCCEEECCCHHHHHHHHH AGARETLQRYAITFWLLSANPSINRGTLEKESRTVAQRLSVLHGINAPEFFDKAVFSSLV HHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LTLRDEGYISDSGDAEPAETMKVYQLLAELITSDVRLTIESATQGEG HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC >Mature Secondary Structure TFCYPCRAFALLTRGFTSFMSGWPRIYYKLLNLPLSILVKSKSIPADPAPELGLDTSRP CEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCC IMYVLPYNSKADLLTLRAQCLAHDLPDPLEPLEIDGTLLPRYVFIHGGPRVFTYYTPKEE EEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEECEEEEEECCCEEEEEECCCHH SIKLFHDYLDLHRSNPNLDVQMVPVSVMFGRAPGREKGEVNPPLRMLNGVQKFFAVLWLG HHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC RDSFVRFSPSVSLRRMADEHGTDKTIAQKLARVARMHFARQRLAAVGPRLPARQDLFNKL CCCCEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH LASRAIAKAVEDEARSKKISHEKAQQNAIVLMEEIAANFSYEMIRLTDRILGFTWNRLYQ HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC GINVHNAERVRQLAHDGHELVYVPCHRSHMDYLLLSYVLYHQGLVPPHIAAGINLNFWPA CCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCEECCCC GPIFRRLGAFFIRRTFKGNKLYSTVFREYLGELFSRGYSVEYFVEGGRSRTGRLLDPKTG CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEECCCCC TLSMTIQAMLRGGTRPITLIPIYIGYEHVMEVGTYAKELRGATKEKESLPQMLRGLSKLR HHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH NLGQGYVNFGEPMPLMTYLNQHVPDWRESIDPIEAVRPAWLTPTVNNIAADLMVRINNAG HCCCCCCCCCCCCHHHHHHHHCCCCHHHCCCHHHHCCCCCCCCCHHHHHHHHHEEECCCC AANAMNLCCTALLASRQRSLTREQLTEQLNCYLDLMRNVPYSTDSTVPSASASELIDHAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH QMNKFEVEKDTIGDIIILPREQAVLMTYYRNNIAHMLVLPSLMAAIVTQHRHISRDVLME HCCCEEECCCCCCCEEEECCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH HVNVLYPMLKAELFLRWDRDELPDVIDALANEMQRQGLITLQDDELHINPAHSRTLQLLA HHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHCCCEEEECCCEEECCCHHHHHHHHH AGARETLQRYAITFWLLSANPSINRGTLEKESRTVAQRLSVLHGINAPEFFDKAVFSSLV HHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LTLRDEGYISDSGDAEPAETMKVYQLLAELITSDVRLTIESATQGEG HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA