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The map label for this gene is yibD [C]

Identifier: 170682772

GI number: 170682772

Start: 2274063

End: 2276285

Strand: Reverse

Name: yibD [C]

Synonym: EcSMS35_2255

Alternate gene names: 170682772

Gene position: 2276285-2274063 (Counterclockwise)

Preceding gene: 170684064

Following gene: 170680370

Centisome position: 44.91

GC content: 39.14

Gene sequence:

>2223_bases
ATGAAGAAAATTCTTATAATGACGCCGGACATTGAGGGGCCTGTCCGTAACGGCGGTATTGGTACTGCTTTCACTGCTCT
TGCCACTACTTTGGCAAAAAAGGGGTATGATGTTGATGTATTGTATACATGTGGCGACTATTCTGAATCATCTGTATCGA
AATTTAGCGACTGGTCACGTATTTATAGTACCTTTGGTATCAATCTGCTAAGAACCGGACTGATAAAAGAGATTAATATT
GATGCACCGTATTTTAGAAGGAAAAGTTATTCAATTTATCTCTGGTTGAAAGAAAATAACATCTATGACACTGTTATTTC
TTGTGAGTGGCAGGCAGATCTTTATTACACTTTATTAAGCAAAAAGAATGGAACGGATTTTGAAAATACAAAGTTCATTG
TAAATACTCACAGTTCAACGTTATGGGCTGATGAAGGTAATTACCAGCTTCCATATGATCAGAACCATCTTGAACTCTAT
TATATGGAGAAAATGGTGGTTGAAATGGCGGATGAAGTTGTTAGTCCGTCTCAGTATTTAATTGATTGGATGTTGAGTAA
GCACTGGAATGTTCCTGAAGAACGTCATGTAATTTTAAATTGCGAGCCATTTCAAGGGTTTGTGACGAGAGATGATGTTA
CAGTTAAAATAAATGAAAAGCCAGCTTCTGGCGTTGAGCTTGTATTTTTCGGCCGCCTTGAAACCCGTAAAGGACTTGAC
ATATTCCTGCGTGCATTAAGAAAACTATCTGATGAAGATAAAGAGAGCATTTCTGGAGTAACCTTCCTCGGAAAAAATGT
CACCATGGGGAAAACTGATTCATTTACTTATATTATGAATCAGACTAAAAATTTGGGACTCGCAGTTAATGTCATCTGCG
ACTATGATCGTACCAACGCTAATGAATATATAAAAAGAAAAAATGTATTAGTCATCATTCCATCACTTGTAGAAAACTCA
CCCTATACTGTTTATGAATGCTTGATTAATAACGTTAATTTCCTCGCTTCAAACGTTGGTGGAATTCCAGAGCTTATTCA
GCAGGAGCATCATGCGGAAGTTCTATTTATTCCTACACCTGTCGATTTATACTGGAAAATCCACTATCGCTTAAAAAATA
TAAATATAAAACCAGGGCTTGCTGAATCACAAGACAATATTAAAGAAGCTTGGTTTGTCGCAGTTGAACGAAAAAACAAC
CGCGCATTCAAGAAAATCGATGAAGCTAACAGCCCGTTAGTTAGCGTGTGTATAACTCACTTCGAACGTCACCATTTGCT
TCAGCAAGCACTCGCATCAATAAAATCTCAGACGTACCAAAATATTGAGGTCATCTTGGTTGATGATGGAAGTACGACAG
AAGATTCTCATCGTTATTTAAATCTCATCGAGAATGATTTTAACTCTCGAGGCTGGAAAATTGTCCGTAGTTCTAATAAC
TATCTGGGTGCTGCAAGGAATTTGGCTGCGCGACACGCCTCTGGCGAATATCTGATGTTTATGGACGATGATAATGTTGC
TAAGCCTTTTGAGGTAGAAACGTTTGTTACTGCAGCATTAAACTCTGGGGCCGATGTGTTAACCACACCAAGCGATCTTA
TTTTTGGTGAGGAGTTCCCTTCTCCGTTCCGTAAAATGACGCACTGCTGGCTTCCGTTAGGGCCTGATTTAAATATCGCC
AGCTTTAGTAACTGCTTTGGCGATGCTAATGCGCTGATCAGAAAAGAGGTTTTTGAAAAAGTAGGCGGATTTACTGAAGA
TTACGGTTTAGGTCATGAAGACTGGGAGTTTTTTGCCAAAATATCATTACAGGGATATAAATTGCAAATCGTCCCGGAAC
CTCTATTTTGGTATAGAGTTGCAAACTCCGGCATGTTGTTAAGTGGAAATAAGAGTAAAAATAACTACCGCAGTTTCCGT
CCTTTTATGGATGAGAATGTTAAATATAACTATGCAATGGGGTTGATACCTTCCTACCTCGAGAAGATTCAAGAACTTGA
GAGTGAAGTGAATCGCTTGCGGAGCATCAATGGTGGTCATTCTGTCAGTAACGAGTTACAACTTTTAAATAATAAGGTTG
ATGGTCTTATTTCTCAGCAAAGAGATGGCTGGGCCCATGACCGTTTTAATGCTCTGTATGAAGCAATTCATGTCCAAGGC
GCAAAACGAGGCACCAGCCTGGTTCGCCGGGTTGCCCGGAAAGTGAAATCAATGTTAAAATAA

Upstream 100 bases:

>100_bases
CATTTTTTATCCTGTTTAACAGAAGCTACCGACTGCTATCTTACACTACTTCAATTCACTAATATCATAGAAAAGTCTAG
GTTACAAAGGAAGGGTTACA

Downstream 100 bases:

>100_bases
AGCAATATTCGGGGCCAGAAAAGGCTCCGAAAAAATAATATTAACTTTCAGCTAATTTTAAATTTGTCTGTAAATAACCC
TGTTTTAGTTGCATGTATTT

Product: glycosyl transferase, group 1/glycosyl transferase, group 2

Products: NA

Alternate protein names: Glycosyl Transferase; Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein; Family 2 Glycosyl Transferase; Glycosyltransferase-Like Protein; Glycosyl Transferase GT2 Family Protein; Glycosyl Transferase Family 2 Protein; UDP-Glucose 4-Epimerase; Group 1 Glycosyl Transferase; Beta(1 3)Galactosyltransferase EpsH; Glycosyl Transferase Gt2E; Tyrosine Protein Kinase; Glycosyl Transferase Gt2I; Group 2 Family Glycosyl Transferase; Beta-1 3-N-Acetylglucosaminyltransferase; Glycosyl Transferase Group 2 Family; Glycosyltransferase WbgO; Cell Wall Biogenesis Glycosyltransferase-Like Protein

Number of amino acids: Translated: 740; Mature: 740

Protein sequence:

>740_residues
MKKILIMTPDIEGPVRNGGIGTAFTALATTLAKKGYDVDVLYTCGDYSESSVSKFSDWSRIYSTFGINLLRTGLIKEINI
DAPYFRRKSYSIYLWLKENNIYDTVISCEWQADLYYTLLSKKNGTDFENTKFIVNTHSSTLWADEGNYQLPYDQNHLELY
YMEKMVVEMADEVVSPSQYLIDWMLSKHWNVPEERHVILNCEPFQGFVTRDDVTVKINEKPASGVELVFFGRLETRKGLD
IFLRALRKLSDEDKESISGVTFLGKNVTMGKTDSFTYIMNQTKNLGLAVNVICDYDRTNANEYIKRKNVLVIIPSLVENS
PYTVYECLINNVNFLASNVGGIPELIQQEHHAEVLFIPTPVDLYWKIHYRLKNINIKPGLAESQDNIKEAWFVAVERKNN
RAFKKIDEANSPLVSVCITHFERHHLLQQALASIKSQTYQNIEVILVDDGSTTEDSHRYLNLIENDFNSRGWKIVRSSNN
YLGAARNLAARHASGEYLMFMDDDNVAKPFEVETFVTAALNSGADVLTTPSDLIFGEEFPSPFRKMTHCWLPLGPDLNIA
SFSNCFGDANALIRKEVFEKVGGFTEDYGLGHEDWEFFAKISLQGYKLQIVPEPLFWYRVANSGMLLSGNKSKNNYRSFR
PFMDENVKYNYAMGLIPSYLEKIQELESEVNRLRSINGGHSVSNELQLLNNKVDGLISQQRDGWAHDRFNALYEAIHVQG
AKRGTSLVRRVARKVKSMLK

Sequences:

>Translated_740_residues
MKKILIMTPDIEGPVRNGGIGTAFTALATTLAKKGYDVDVLYTCGDYSESSVSKFSDWSRIYSTFGINLLRTGLIKEINI
DAPYFRRKSYSIYLWLKENNIYDTVISCEWQADLYYTLLSKKNGTDFENTKFIVNTHSSTLWADEGNYQLPYDQNHLELY
YMEKMVVEMADEVVSPSQYLIDWMLSKHWNVPEERHVILNCEPFQGFVTRDDVTVKINEKPASGVELVFFGRLETRKGLD
IFLRALRKLSDEDKESISGVTFLGKNVTMGKTDSFTYIMNQTKNLGLAVNVICDYDRTNANEYIKRKNVLVIIPSLVENS
PYTVYECLINNVNFLASNVGGIPELIQQEHHAEVLFIPTPVDLYWKIHYRLKNINIKPGLAESQDNIKEAWFVAVERKNN
RAFKKIDEANSPLVSVCITHFERHHLLQQALASIKSQTYQNIEVILVDDGSTTEDSHRYLNLIENDFNSRGWKIVRSSNN
YLGAARNLAARHASGEYLMFMDDDNVAKPFEVETFVTAALNSGADVLTTPSDLIFGEEFPSPFRKMTHCWLPLGPDLNIA
SFSNCFGDANALIRKEVFEKVGGFTEDYGLGHEDWEFFAKISLQGYKLQIVPEPLFWYRVANSGMLLSGNKSKNNYRSFR
PFMDENVKYNYAMGLIPSYLEKIQELESEVNRLRSINGGHSVSNELQLLNNKVDGLISQQRDGWAHDRFNALYEAIHVQG
AKRGTSLVRRVARKVKSMLK
>Mature_740_residues
MKKILIMTPDIEGPVRNGGIGTAFTALATTLAKKGYDVDVLYTCGDYSESSVSKFSDWSRIYSTFGINLLRTGLIKEINI
DAPYFRRKSYSIYLWLKENNIYDTVISCEWQADLYYTLLSKKNGTDFENTKFIVNTHSSTLWADEGNYQLPYDQNHLELY
YMEKMVVEMADEVVSPSQYLIDWMLSKHWNVPEERHVILNCEPFQGFVTRDDVTVKINEKPASGVELVFFGRLETRKGLD
IFLRALRKLSDEDKESISGVTFLGKNVTMGKTDSFTYIMNQTKNLGLAVNVICDYDRTNANEYIKRKNVLVIIPSLVENS
PYTVYECLINNVNFLASNVGGIPELIQQEHHAEVLFIPTPVDLYWKIHYRLKNINIKPGLAESQDNIKEAWFVAVERKNN
RAFKKIDEANSPLVSVCITHFERHHLLQQALASIKSQTYQNIEVILVDDGSTTEDSHRYLNLIENDFNSRGWKIVRSSNN
YLGAARNLAARHASGEYLMFMDDDNVAKPFEVETFVTAALNSGADVLTTPSDLIFGEEFPSPFRKMTHCWLPLGPDLNIA
SFSNCFGDANALIRKEVFEKVGGFTEDYGLGHEDWEFFAKISLQGYKLQIVPEPLFWYRVANSGMLLSGNKSKNNYRSFR
PFMDENVKYNYAMGLIPSYLEKIQELESEVNRLRSINGGHSVSNELQLLNNKVDGLISQQRDGWAHDRFNALYEAIHVQG
AKRGTSLVRRVARKVKSMLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 84567; Mature: 84567

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILIMTPDIEGPVRNGGIGTAFTALATTLAKKGYDVDVLYTCGDYSESSVSKFSDWSR
CCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHH
IYSTFGINLLRTGLIKEINIDAPYFRRKSYSIYLWLKENNIYDTVISCEWQADLYYTLLS
HHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEEEECCCEEEEEEEEEECCCEEEEEEE
KKNGTDFENTKFIVNTHSSTLWADEGNYQLPYDQNHLELYYMEKMVVEMADEVVSPSQYL
CCCCCCCCCCEEEEEECCCEEEECCCCEECCCCCCCEEEEHHHHHHHHHHHHHCCCHHHH
IDWMLSKHWNVPEERHVILNCEPFQGFVTRDDVTVKINEKPASGVELVFFGRLETRKGLD
HHHHHHHCCCCCCCCEEEEECCCCCCEEECCCEEEEECCCCCCCEEEEEEECCCCCCCHH
IFLRALRKLSDEDKESISGVTFLGKNVTMGKTDSFTYIMNQTKNLGLAVNVICDYDRTNA
HHHHHHHHHCCCCHHHCCCEEEECCCEECCCCCCEEEEECCCCCCCEEEEEEECCCCCCH
NEYIKRKNVLVIIPSLVENSPYTVYECLINNVNFLASNVGGIPELIQQEHHAEVLFIPTP
HHHHHHCCEEEEEEHHHCCCCCHHHHHHHCCHHHHHHCCCCCHHHHHHCCCCEEEEEECC
VDLYWKIHYRLKNINIKPGLAESQDNIKEAWFVAVERKNNRAFKKIDEANSPLVSVCITH
CEEEEEEEEEEEEECCCCCCCCCHHHHCEEEEEEEEECCCCHHHHHHCCCCHHHHHHHHH
FERHHLLQQALASIKSQTYQNIEVILVDDGSTTEDSHRYLNLIENDFNSRGWKIVRSSNN
HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCC
YLGAARNLAARHASGEYLMFMDDDNVAKPFEVETFVTAALNSGADVLTTPSDLIFGEEFP
CCCHHHHHHHHCCCCCEEEEECCCCCCCCEEHHHHHHHHHCCCCCEEECCHHHCCCCCCC
SPFRKMTHCWLPLGPDLNIASFSNCFGDANALIRKEVFEKVGGFTEDYGLGHEDWEFFAK
CHHHHHHHEECCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHCCCCHHCCCCCCCCEEEEE
ISLQGYKLQIVPEPLFWYRVANSGMLLSGNKSKNNYRSFRPFMDENVKYNYAMGLIPSYL
EEECCEEEEEECCCEEEEEEECCCEEEECCCCCCCHHHHCCCCCCCCEEEEEHHHHHHHH
EKIQELESEVNRLRSINGGHSVSNELQLLNNKVDGLISQQRDGWAHDRFNALYEAIHVQG
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
AKRGTSLVRRVARKVKSMLK
CHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKILIMTPDIEGPVRNGGIGTAFTALATTLAKKGYDVDVLYTCGDYSESSVSKFSDWSR
CCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHH
IYSTFGINLLRTGLIKEINIDAPYFRRKSYSIYLWLKENNIYDTVISCEWQADLYYTLLS
HHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEEEECCCEEEEEEEEEECCCEEEEEEE
KKNGTDFENTKFIVNTHSSTLWADEGNYQLPYDQNHLELYYMEKMVVEMADEVVSPSQYL
CCCCCCCCCCEEEEEECCCEEEECCCCEECCCCCCCEEEEHHHHHHHHHHHHHCCCHHHH
IDWMLSKHWNVPEERHVILNCEPFQGFVTRDDVTVKINEKPASGVELVFFGRLETRKGLD
HHHHHHHCCCCCCCCEEEEECCCCCCEEECCCEEEEECCCCCCCEEEEEEECCCCCCCHH
IFLRALRKLSDEDKESISGVTFLGKNVTMGKTDSFTYIMNQTKNLGLAVNVICDYDRTNA
HHHHHHHHHCCCCHHHCCCEEEECCCEECCCCCCEEEEECCCCCCCEEEEEEECCCCCCH
NEYIKRKNVLVIIPSLVENSPYTVYECLINNVNFLASNVGGIPELIQQEHHAEVLFIPTP
HHHHHHCCEEEEEEHHHCCCCCHHHHHHHCCHHHHHHCCCCCHHHHHHCCCCEEEEEECC
VDLYWKIHYRLKNINIKPGLAESQDNIKEAWFVAVERKNNRAFKKIDEANSPLVSVCITH
CEEEEEEEEEEEEECCCCCCCCCHHHHCEEEEEEEEECCCCHHHHHHCCCCHHHHHHHHH
FERHHLLQQALASIKSQTYQNIEVILVDDGSTTEDSHRYLNLIENDFNSRGWKIVRSSNN
HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCC
YLGAARNLAARHASGEYLMFMDDDNVAKPFEVETFVTAALNSGADVLTTPSDLIFGEEFP
CCCHHHHHHHHCCCCCEEEEECCCCCCCCEEHHHHHHHHHCCCCCEEECCHHHCCCCCCC
SPFRKMTHCWLPLGPDLNIASFSNCFGDANALIRKEVFEKVGGFTEDYGLGHEDWEFFAK
CHHHHHHHEECCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHCCCCHHCCCCCCCCEEEEE
ISLQGYKLQIVPEPLFWYRVANSGMLLSGNKSKNNYRSFRPFMDENVKYNYAMGLIPSYL
EEECCEEEEEECCCEEEEEEECCCEEEECCCCCCCHHHHCCCCCCCCEEEEEHHHHHHHH
EKIQELESEVNRLRSINGGHSVSNELQLLNNKVDGLISQQRDGWAHDRFNALYEAIHVQG
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
AKRGTSLVRRVARKVKSMLK
CHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA