Click here to switch to the map view.

The map label for this gene is ftsY [H]

Identifier: 170682136

GI number: 170682136

Start: 3813999

End: 3815537

Strand: Reverse

Name: ftsY [H]

Synonym: EcSMS35_3747

Alternate gene names: 170682136

Gene position: 3815537-3813999 (Counterclockwise)

Preceding gene: 170680688

Following gene: 170684146

Centisome position: 75.28

GC content: 52.76

Gene sequence:

>1539_bases
ATGGCGAAAGAAAAAAAACGTGGCTTTTTTTCCTGGCTGGGCTTTGGTCAAAAAGAGCAGACCCCGGAAAAAGAGACAGA
AGTTCAGAATGAACAACCAGTTGTAGAAGAAATCGTTCCGGCGCAAGAGCCTGTGAAGGCTTCTGAACAAACCGTTGAAG
AGCAGCCGCAGGCGCATACTGAAGCCGAGGCGGAAACTTTTGCTGCCGACGTTGTGGAAGTTACTGAACAGGTTGCTGAA
AGTGAAAAAGCGCAGCCTGAAGCTGTTGCTGAACCGGAAGTTATTACTGAGCCGGAAACGATAGTTGAAGAAACGCCAGC
GTCAGTCATTGAACCTGAAGTTACGCCAGAGCCAGTGGCTATCGAGCGTGAAGAGCTGCCGTTGCCGGAAGACGTCAACG
CCGAAGAGGTTTCGCCAGAAGAGTGGCAGGCTGAAGCGGAAACCCTAGAGATTGTCGAAGCGGCGGAAGAAGAAGCGGCT
AAAGAAGACATCACCGACGAAGAGCTGGAAGCACAGGCGCTGGCTGCCGAAGCGGCAGAAGAGGCGGTAATGGTGGTTTC
TCCGGCAGAAGAAGAGCAGCCGGTGGAAGAAATCGCTCAGGAGCAGGAAAAACCGACCAAAGAAGGTTTCTTCGCGCGCC
TGAAACGCAGCCTGTTAAAAACCAAAGAAAATCTCGGTTCCGGATTTATCAGCCTGTTCCGCGGTAAAAAAATCGACGAT
GATCTGTTTGAAGAGCTGGAAGAACAGCTGTTGATCGCCGATGTGGGCGTGGAAACCACACGTAAAATTATCACCAATCT
GACGGAAGGCGCATCCCGCAAGCAGCTTCGTGATGCCGAGGCGCTCTATGGCCTGCTGAAAGAAGAGATGGGCGAGATTC
TGGCGAAAGTCGATGAGCCGCTGAATGTTGAAGGTAAAACGCCGTTCGTGATCCTGATGGTGGGCGTCAACGGTGTGGGT
AAAACCACGACGATTGGTAAGCTGGCGCGTCAGTTTGAGCAGCAGGGTAAATCGGTGATGCTGGCGGCAGGCGATACTTT
CCGTGCGGCAGCGGTTGAACAGCTTCAGGTCTGGGGTCAGCGCAACAATATTCCGGTGATTGCCCAGCATACCGGTGCGG
ATTCCGCTTCTGTTATCTTCGACGCCATTCAGGCCGCTAAAGCGCGTAACATCGACGTCCTGATTGCCGATACCGCCGGA
CGCCTGCAAAACAAATCGCACCTGATGGAAGAGTTGAAGAAAATCGTCCGCGTGATGAAGAAACTCGACGTTGAAGCTCC
GCATGAAGTTATGCTGACTATTGATGCCAGCACCGGGCAGAATGCGGTAAGCCAGGCCAAACTGTTCCACGAAGCCGTTG
GCTTAACCGGCATCACGCTAACGAAACTGGACGGCACGGCGAAAGGCGGGGTAATTTTCTCGGTGGCTGACCAGTTTGGT
ATCCCTATCCGCTACATTGGTGTCGGCGAACGTATTGAGGATTTGCGTCCGTTTAAGGCGGACGACTTTATAGAGGCACT
TTTTGCCCGAGAGGATTAA

Upstream 100 bases:

>100_bases
GAATTAAGTTAAGTGATAGACTATTTCATCATTTTTTTAGCTGCTATGTACATAGCGTTAACGCTGTGCCATGAAGCAAC
AGCGAGGAGTGTAGTCGCAA

Downstream 100 bases:

>100_bases
CAATGATTCGCTTTGAACATGTCAGCAAGGCTTATCTCGGTGGGAGACAGGCGCTGCAGGGCGTTACGTTCCATATGCAG
CCGGGTGAGATGGCGTTTCT

Product: cell division protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 512; Mature: 511

Protein sequence:

>512_residues
MAKEKKRGFFSWLGFGQKEQTPEKETEVQNEQPVVEEIVPAQEPVKASEQTVEEQPQAHTEAEAETFAADVVEVTEQVAE
SEKAQPEAVAEPEVITEPETIVEETPASVIEPEVTPEPVAIEREELPLPEDVNAEEVSPEEWQAEAETLEIVEAAEEEAA
KEDITDEELEAQALAAEAAEEAVMVVSPAEEEQPVEEIAQEQEKPTKEGFFARLKRSLLKTKENLGSGFISLFRGKKIDD
DLFEELEEQLLIADVGVETTRKIITNLTEGASRKQLRDAEALYGLLKEEMGEILAKVDEPLNVEGKTPFVILMVGVNGVG
KTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIFDAIQAAKARNIDVLIADTAG
RLQNKSHLMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAVGLTGITLTKLDGTAKGGVIFSVADQFG
IPIRYIGVGERIEDLRPFKADDFIEALFARED

Sequences:

>Translated_512_residues
MAKEKKRGFFSWLGFGQKEQTPEKETEVQNEQPVVEEIVPAQEPVKASEQTVEEQPQAHTEAEAETFAADVVEVTEQVAE
SEKAQPEAVAEPEVITEPETIVEETPASVIEPEVTPEPVAIEREELPLPEDVNAEEVSPEEWQAEAETLEIVEAAEEEAA
KEDITDEELEAQALAAEAAEEAVMVVSPAEEEQPVEEIAQEQEKPTKEGFFARLKRSLLKTKENLGSGFISLFRGKKIDD
DLFEELEEQLLIADVGVETTRKIITNLTEGASRKQLRDAEALYGLLKEEMGEILAKVDEPLNVEGKTPFVILMVGVNGVG
KTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIFDAIQAAKARNIDVLIADTAG
RLQNKSHLMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAVGLTGITLTKLDGTAKGGVIFSVADQFG
IPIRYIGVGERIEDLRPFKADDFIEALFARED
>Mature_511_residues
AKEKKRGFFSWLGFGQKEQTPEKETEVQNEQPVVEEIVPAQEPVKASEQTVEEQPQAHTEAEAETFAADVVEVTEQVAES
EKAQPEAVAEPEVITEPETIVEETPASVIEPEVTPEPVAIEREELPLPEDVNAEEVSPEEWQAEAETLEIVEAAEEEAAK
EDITDEELEAQALAAEAAEEAVMVVSPAEEEQPVEEIAQEQEKPTKEGFFARLKRSLLKTKENLGSGFISLFRGKKIDDD
LFEELEEQLLIADVGVETTRKIITNLTEGASRKQLRDAEALYGLLKEEMGEILAKVDEPLNVEGKTPFVILMVGVNGVGK
TTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIFDAIQAAKARNIDVLIADTAGR
LQNKSHLMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAVGLTGITLTKLDGTAKGGVIFSVADQFGI
PIRYIGVGERIEDLRPFKADDFIEALFARED

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane. Binds to the ribosome in the presence of the SRP particle and a non-hydrolyzable GTP analog. This abolishes trigger f

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=276, Percent_Identity=31.1594202898551, Blast_Score=136, Evalue=4e-32,
Organism=Homo sapiens, GI226371618, Length=203, Percent_Identity=35.9605911330049, Blast_Score=134, Evalue=3e-31,
Organism=Homo sapiens, GI295424842, Length=225, Percent_Identity=33.3333333333333, Blast_Score=113, Evalue=4e-25,
Organism=Homo sapiens, GI23308697, Length=225, Percent_Identity=33.3333333333333, Blast_Score=113, Evalue=4e-25,
Organism=Homo sapiens, GI89061728, Length=147, Percent_Identity=32.6530612244898, Blast_Score=87, Evalue=4e-17,
Organism=Escherichia coli, GI1789874, Length=512, Percent_Identity=94.140625, Blast_Score=857, Evalue=0.0,
Organism=Escherichia coli, GI1788963, Length=311, Percent_Identity=32.7974276527331, Blast_Score=159, Evalue=4e-40,
Organism=Caenorhabditis elegans, GI193206261, Length=318, Percent_Identity=30.5031446540881, Blast_Score=120, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI17539958, Length=281, Percent_Identity=27.4021352313167, Blast_Score=120, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6325345, Length=288, Percent_Identity=32.6388888888889, Blast_Score=136, Evalue=9e-33,
Organism=Saccharomyces cerevisiae, GI6320498, Length=223, Percent_Identity=34.0807174887892, Blast_Score=103, Evalue=7e-23,
Organism=Drosophila melanogaster, GI17647949, Length=283, Percent_Identity=31.095406360424, Blast_Score=127, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24641198, Length=333, Percent_Identity=27.6276276276276, Blast_Score=117, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 56172; Mature: 56040

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKEKKRGFFSWLGFGQKEQTPEKETEVQNEQPVVEEIVPAQEPVKASEQTVEEQPQAHT
CCCCHHCCHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHCCCCCCCCHHHHHHHHCCHHHH
EAEAETFAADVVEVTEQVAESEKAQPEAVAEPEVITEPETIVEETPASVIEPEVTPEPVA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCHHHCCCCCCCCCCE
IEREELPLPEDVNAEEVSPEEWQAEAETLEIVEAAEEEAAKEDITDEELEAQALAAEAAE
ECHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
EAVMVVSPAEEEQPVEEIAQEQEKPTKEGFFARLKRSLLKTKENLGSGFISLFRGKKIDD
CEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
DLFEELEEQLLIADVGVETTRKIITNLTEGASRKQLRDAEALYGLLKEEMGEILAKVDEP
HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LNVEGKTPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQ
CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCC
RNNIPVIAQHTGADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSHLMEELKKIVRVMK
CCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHCCHHHHHHHHHHHHHHHH
KLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAVGLTGITLTKLDGTAKGGVIFSVADQFG
HCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEHHHHC
IPIRYIGVGERIEDLRPFKADDFIEALFARED
CCEEEECCCHHHHHCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
AKEKKRGFFSWLGFGQKEQTPEKETEVQNEQPVVEEIVPAQEPVKASEQTVEEQPQAHT
CCCHHCCHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHCCCCCCCCHHHHHHHHCCHHHH
EAEAETFAADVVEVTEQVAESEKAQPEAVAEPEVITEPETIVEETPASVIEPEVTPEPVA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCHHHCCCCCCCCCCE
IEREELPLPEDVNAEEVSPEEWQAEAETLEIVEAAEEEAAKEDITDEELEAQALAAEAAE
ECHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
EAVMVVSPAEEEQPVEEIAQEQEKPTKEGFFARLKRSLLKTKENLGSGFISLFRGKKIDD
CEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
DLFEELEEQLLIADVGVETTRKIITNLTEGASRKQLRDAEALYGLLKEEMGEILAKVDEP
HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LNVEGKTPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQ
CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCC
RNNIPVIAQHTGADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSHLMEELKKIVRVMK
CCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHCCHHHHHHHHHHHHHHHH
KLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAVGLTGITLTKLDGTAKGGVIFSVADQFG
HCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEHHHHC
IPIRYIGVGERIEDLRPFKADDFIEALFARED
CCEEEECCCHHHHHCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 3025556; 8041620; 9278503; 2161989; 8194520; 9002525 [H]