Click here to switch to the map view.

The map label for this gene is yhhM [H]

Identifier: 170680688

GI number: 170680688

Start: 3816545

End: 3816904

Strand: Reverse

Name: yhhM [H]

Synonym: EcSMS35_3750

Alternate gene names: 170680688

Gene position: 3816904-3816545 (Counterclockwise)

Preceding gene: 170684194

Following gene: 170682136

Centisome position: 75.31

GC content: 50.0

Gene sequence:

>360_bases
ATGAGTAAACCACCTCTTTTCTTTATTGTTATCATTGGCTTAATCATCGTCGCCGCATCGTTTCGTTTTATGCAACAACG
ACGGGAAAAAGCTGATAATGATATGGCACCGCTCCAGCAAAAGCTGGTGGTGGTGAGCAACAAGCGGGAAAAACCGATTA
ACGATCGCCGTTCGCGCCAGCAGGAAGTAACTCCGGCAGGCACCAGTATGCGCTATGAGGCAAGCTTCAAACCGCAAAGC
GGAGGAATGGAGCAGACGTTTCGCCTAGACGCCCAGCAGTACCACGCCCTGACAGTGGGCGATAAAGGTACGCTGAGCTA
TAAAGGAACGCGCTTTGTCAGCTTTATAGGCGAACAATAA

Upstream 100 bases:

>100_bases
CCTACGGTCTTGCTTCCAGTTTAGTGGCGAGGGTGGACGGATGACAACACCATAACTGGCAGGGTATGCTTATTTCCGCA
TTTTCCGATGAGGGATAAAG

Downstream 100 bases:

>100_bases
GGTTATTTTTTAACTTTAAATTTCTTCTGCCAGACCAGCAGTTCAAACACGCCGAAAAGGAAAATCCGCACCTTTTCGGC
GGTGGTCATCTGCGGGCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 118

Protein sequence:

>119_residues
MSKPPLFFIVIIGLIIVAASFRFMQQRREKADNDMAPLQQKLVVVSNKREKPINDRRSRQQEVTPAGTSMRYEASFKPQS
GGMEQTFRLDAQQYHALTVGDKGTLSYKGTRFVSFIGEQ

Sequences:

>Translated_119_residues
MSKPPLFFIVIIGLIIVAASFRFMQQRREKADNDMAPLQQKLVVVSNKREKPINDRRSRQQEVTPAGTSMRYEASFKPQS
GGMEQTFRLDAQQYHALTVGDKGTLSYKGTRFVSFIGEQ
>Mature_118_residues
SKPPLFFIVIIGLIIVAASFRFMQQRREKADNDMAPLQQKLVVVSNKREKPINDRRSRQQEVTPAGTSMRYEASFKPQSG
GMEQTFRLDAQQYHALTVGDKGTLSYKGTRFVSFIGEQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789877, Length=119, Percent_Identity=97.4789915966387, Blast_Score=242, Evalue=4e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019635 [H]

Pfam domain/function: PF10694 DUF2500 [H]

EC number: NA

Molecular weight: Translated: 13543; Mature: 13412

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKPPLFFIVIIGLIIVAASFRFMQQRREKADNDMAPLQQKLVVVSNKREKPINDRRSRQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHH
QEVTPAGTSMRYEASFKPQSGGMEQTFRLDAQQYHALTVGDKGTLSYKGTRFVSFIGEQ
HCCCCCCCCEEEEECCCCCCCCCCHHEEECHHHHEEEECCCCCCEEECCCEEEEEECCC
>Mature Secondary Structure 
SKPPLFFIVIIGLIIVAASFRFMQQRREKADNDMAPLQQKLVVVSNKREKPINDRRSRQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHH
QEVTPAGTSMRYEASFKPQSGGMEQTFRLDAQQYHALTVGDKGTLSYKGTRFVSFIGEQ
HCCCCCCCCEEEEECCCCCCCCCCHHEEECHHHHEEEECCCCCCEEECCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]