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The map label for this gene is yicI [C]

Identifier: 170681287

GI number: 170681287

Start: 22139

End: 24178

Strand: Reverse

Name: yicI [C]

Synonym: EcSMS35_0019

Alternate gene names: 170681287

Gene position: 24178-22139 (Counterclockwise)

Preceding gene: 170680613

Following gene: 170680475

Centisome position: 0.48

GC content: 50.25

Gene sequence:

>2040_bases
ATGTCGTTTATTAAGCAAGATCCCCACCGTCTGGTCTGGCAACAAGACGATCGTTATCTCTGGATTGAAGCCTGGGGCGA
AAACAGCTTACGCGTGCGAAGCGGCCGCCATTTACCGGTAATGCGCAATGAAAACTGGGCGTTAACTCAGGATCCTGGCG
ATGCTGTCGCTCATATCACCTGGGATGAAAAACAGGCAACGCTGAGAAATGGTAAAATCACTGCCATCGTAAATCTTCAG
GGCCAGCTCTCTTTCTGGCGTAATGATGATAAATGCCTGCTGCAAGAGTTCTGGCGTCAACGTGGCGAAATTGGTGAAGA
TGAGTCAGCACACGGCCAATATGTGAGCGCTCTTAATCTACAGGCCCGTGAATTCAAGCCTATTCCTGGCGGGAAATTTA
CGATTAAGGCACGATTTGAAGCCAACGATGGCGAGAAACTCTTTGGCATGGGTCAGTATCAGCAACCAAACCTGGATTTA
AAAGGTTGCATGCTGGAGCTGGCACAACGTAACTCGCAGGCTTCTGTTCCCTTCCTGCTATCAAATCAGGGTTATGGTTT
TCTGTGGAATAACCCAGCAATTGGCCGCGTCACCTTCGCGCAAAACGGTACGGAATGGGTAGCAGAAGTCAGTGAACAAC
TGGACTACTGGATCACTGCGGGCGATACTCCGGCTGAGATCAGTGAAGCCTATGCACGAGTAACCGGTACGCCACCGATG
ATGCCTGATTACGCAATGGGGTTCTGGCAATGCAAGCTTCGCTATCGTAATCAACAAGAATTGTTAGAAGTCGCACGCGG
CTACAAGCAACGCAATCTTCCGATCTCGGTGATTGTCATCGATTTCTTCCATTGGCCGAATCAGGGTGACTGGATGTTCG
ATCTGCGTGACTGGCCCGATCCCGATGCGATGATCGCCGAATTAAAAGAAATGGGTATCGAACTGATGGTTTCATTCTGG
CCTACCGTAGATAACCGTACCGAGAGTTATCGGGAGATGAAAGAAAACGGCTGGCTAGTCCACACCGAGCGTGGTTTGCC
TATCAATATGGATTTCCTTGGCAACACCACGTTCTTTGATGCGACACATCCTGGCGCACGGGAATATGTCTGGAACAAAG
CCAAACGCAATTATTACGATAAAGGCGTGAAACTGTTCTGGCTGGATGAAGCCGAGCCAGAGTTCGGTGTTTACGATTAT
GACAACTATCGTTACTACGCAGGGCCAGTGCTGGAAGTCGGTAATATCTATCCGCGTATGTACGCCAAAACGTTCTTCGA
TGGCATGCAGGCAGCCGGAGAAAAGCAGGTGATCAATTTGCTACGCTGCGCCTGGGCCGGTAGTCAGAAATATGGTGCCC
TGGTGTGGTCAGGCGATATCCACTCCTCCTTCCGTTCTCTGCGCAATCAGTTTGCTGCGGGGCTGAACATGGGAATTGCC
GGGATCCCGTGGTGGACGACGGATATTGGCGGTTTCCACGGTGGCAACATACATGATCCAAAATTTCATGAACTGCTTAT
TCGCTGGTTCCAGTGGGGGGTATTCAGCCCAGTAATGCGTTTACATGGCAACCGCGACCCGCAAGTTTTGCCTGAACAAC
CCTATCGTGATGGCATCGCACAATGTCCGACTGGCGCGCCGAATGAAGTCTGGAGCTATGGTGAAGAAACCGGTGAAATT
CTCACTTCCTGCCTGCAGTTGCGTGAGAAGCTGAAACCTTATATCAGTAAAATTATGGCTGAGACGCACGAGAAGAACAG
CCCGGTAATGCGCACGATGTTCTTTGAGTTTCCAGACCAGGCAGAAAGCTGGAATATTTATGATCAGTACTGCTTTGGCC
CGGACCTTCTCGTTGCCCCTGTAATGCACGAAGGTACACGTTCACGTGATGTCTGGTTGCCTGCCGGAGAGACATGGATC
GATTTTTATACCCATGAACACTACGCGGGTGGGCAAAAGCTTCATCATTGCGCGCCGCTGCACCAGATACCGGTATTCAT
TCGTGAGAAAGGGAAATATCGCCAGTTATTACCCGTTTAA

Upstream 100 bases:

>100_bases
TCGCCAGTATGAAGCGATGGAAGGTCGTATCCAACACGATCTGCAAGCCCACAATCGTTGAATTTAATCAACATGCCACT
TGCTCCTGGGAGGAACAATT

Downstream 100 bases:

>100_bases
AGGACATCGTTTGTTCATTAGCACGCCCCGTATATAGCGGGGCGTGAGTTTTAATATCTATCGTGAGGCGGGAGAAAACA
ACGAAGAATAATCCGTATTG

Product: glycosyl hydrolase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 679; Mature: 678

Protein sequence:

>679_residues
MSFIKQDPHRLVWQQDDRYLWIEAWGENSLRVRSGRHLPVMRNENWALTQDPGDAVAHITWDEKQATLRNGKITAIVNLQ
GQLSFWRNDDKCLLQEFWRQRGEIGEDESAHGQYVSALNLQAREFKPIPGGKFTIKARFEANDGEKLFGMGQYQQPNLDL
KGCMLELAQRNSQASVPFLLSNQGYGFLWNNPAIGRVTFAQNGTEWVAEVSEQLDYWITAGDTPAEISEAYARVTGTPPM
MPDYAMGFWQCKLRYRNQQELLEVARGYKQRNLPISVIVIDFFHWPNQGDWMFDLRDWPDPDAMIAELKEMGIELMVSFW
PTVDNRTESYREMKENGWLVHTERGLPINMDFLGNTTFFDATHPGAREYVWNKAKRNYYDKGVKLFWLDEAEPEFGVYDY
DNYRYYAGPVLEVGNIYPRMYAKTFFDGMQAAGEKQVINLLRCAWAGSQKYGALVWSGDIHSSFRSLRNQFAAGLNMGIA
GIPWWTTDIGGFHGGNIHDPKFHELLIRWFQWGVFSPVMRLHGNRDPQVLPEQPYRDGIAQCPTGAPNEVWSYGEETGEI
LTSCLQLREKLKPYISKIMAETHEKNSPVMRTMFFEFPDQAESWNIYDQYCFGPDLLVAPVMHEGTRSRDVWLPAGETWI
DFYTHEHYAGGQKLHHCAPLHQIPVFIREKGKYRQLLPV

Sequences:

>Translated_679_residues
MSFIKQDPHRLVWQQDDRYLWIEAWGENSLRVRSGRHLPVMRNENWALTQDPGDAVAHITWDEKQATLRNGKITAIVNLQ
GQLSFWRNDDKCLLQEFWRQRGEIGEDESAHGQYVSALNLQAREFKPIPGGKFTIKARFEANDGEKLFGMGQYQQPNLDL
KGCMLELAQRNSQASVPFLLSNQGYGFLWNNPAIGRVTFAQNGTEWVAEVSEQLDYWITAGDTPAEISEAYARVTGTPPM
MPDYAMGFWQCKLRYRNQQELLEVARGYKQRNLPISVIVIDFFHWPNQGDWMFDLRDWPDPDAMIAELKEMGIELMVSFW
PTVDNRTESYREMKENGWLVHTERGLPINMDFLGNTTFFDATHPGAREYVWNKAKRNYYDKGVKLFWLDEAEPEFGVYDY
DNYRYYAGPVLEVGNIYPRMYAKTFFDGMQAAGEKQVINLLRCAWAGSQKYGALVWSGDIHSSFRSLRNQFAAGLNMGIA
GIPWWTTDIGGFHGGNIHDPKFHELLIRWFQWGVFSPVMRLHGNRDPQVLPEQPYRDGIAQCPTGAPNEVWSYGEETGEI
LTSCLQLREKLKPYISKIMAETHEKNSPVMRTMFFEFPDQAESWNIYDQYCFGPDLLVAPVMHEGTRSRDVWLPAGETWI
DFYTHEHYAGGQKLHHCAPLHQIPVFIREKGKYRQLLPV
>Mature_678_residues
SFIKQDPHRLVWQQDDRYLWIEAWGENSLRVRSGRHLPVMRNENWALTQDPGDAVAHITWDEKQATLRNGKITAIVNLQG
QLSFWRNDDKCLLQEFWRQRGEIGEDESAHGQYVSALNLQAREFKPIPGGKFTIKARFEANDGEKLFGMGQYQQPNLDLK
GCMLELAQRNSQASVPFLLSNQGYGFLWNNPAIGRVTFAQNGTEWVAEVSEQLDYWITAGDTPAEISEAYARVTGTPPMM
PDYAMGFWQCKLRYRNQQELLEVARGYKQRNLPISVIVIDFFHWPNQGDWMFDLRDWPDPDAMIAELKEMGIELMVSFWP
TVDNRTESYREMKENGWLVHTERGLPINMDFLGNTTFFDATHPGAREYVWNKAKRNYYDKGVKLFWLDEAEPEFGVYDYD
NYRYYAGPVLEVGNIYPRMYAKTFFDGMQAAGEKQVINLLRCAWAGSQKYGALVWSGDIHSSFRSLRNQFAAGLNMGIAG
IPWWTTDIGGFHGGNIHDPKFHELLIRWFQWGVFSPVMRLHGNRDPQVLPEQPYRDGIAQCPTGAPNEVWSYGEETGEIL
TSCLQLREKLKPYISKIMAETHEKNSPVMRTMFFEFPDQAESWNIYDQYCFGPDLLVAPVMHEGTRSRDVWLPAGETWID
FYTHEHYAGGQKLHHCAPLHQIPVFIREKGKYRQLLPV

Specific function: Unknown

COG id: COG1501

COG function: function code G; Alpha-glucosidases, family 31 of glycosyl hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 31 family [H]

Homologues:

Organism=Homo sapiens, GI66346737, Length=692, Percent_Identity=26.4450867052023, Blast_Score=192, Evalue=1e-48,
Organism=Homo sapiens, GI88900491, Length=543, Percent_Identity=27.9926335174954, Blast_Score=180, Evalue=4e-45,
Organism=Homo sapiens, GI38202257, Length=543, Percent_Identity=27.9926335174954, Blast_Score=180, Evalue=5e-45,
Organism=Homo sapiens, GI119393895, Length=515, Percent_Identity=25.4368932038835, Blast_Score=134, Evalue=3e-31,
Organism=Homo sapiens, GI119393893, Length=515, Percent_Identity=25.4368932038835, Blast_Score=134, Evalue=3e-31,
Organism=Homo sapiens, GI119393891, Length=515, Percent_Identity=25.4368932038835, Blast_Score=134, Evalue=3e-31,
Organism=Homo sapiens, GI221316699, Length=475, Percent_Identity=24.8421052631579, Blast_Score=112, Evalue=1e-24,
Organism=Homo sapiens, GI153791946, Length=402, Percent_Identity=24.8756218905473, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI157364974, Length=233, Percent_Identity=25.7510729613734, Blast_Score=84, Evalue=5e-16,
Organism=Homo sapiens, GI310115361, Length=257, Percent_Identity=24.9027237354086, Blast_Score=82, Evalue=2e-15,
Organism=Escherichia coli, GI2367256, Length=637, Percent_Identity=25.4317111459969, Blast_Score=188, Evalue=1e-48,
Organism=Escherichia coli, GI2367323, Length=399, Percent_Identity=25.8145363408521, Blast_Score=126, Evalue=5e-30,
Organism=Caenorhabditis elegans, GI71991189, Length=648, Percent_Identity=25.3086419753086, Blast_Score=175, Evalue=7e-44,
Organism=Caenorhabditis elegans, GI17560798, Length=657, Percent_Identity=24.3531202435312, Blast_Score=164, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI17560800, Length=657, Percent_Identity=24.3531202435312, Blast_Score=164, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI71985706, Length=262, Percent_Identity=25.5725190839695, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI32563849, Length=261, Percent_Identity=23.7547892720307, Blast_Score=81, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6319706, Length=536, Percent_Identity=24.8134328358209, Blast_Score=122, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24643749, Length=459, Percent_Identity=25.4901960784314, Blast_Score=139, Evalue=6e-33,
Organism=Drosophila melanogaster, GI24643753, Length=459, Percent_Identity=25.4901960784314, Blast_Score=139, Evalue=6e-33,
Organism=Drosophila melanogaster, GI24643751, Length=459, Percent_Identity=25.4901960784314, Blast_Score=139, Evalue=6e-33,
Organism=Drosophila melanogaster, GI24643746, Length=459, Percent_Identity=25.4901960784314, Blast_Score=139, Evalue=6e-33,
Organism=Drosophila melanogaster, GI21357605, Length=459, Percent_Identity=25.4901960784314, Blast_Score=139, Evalue=6e-33,
Organism=Drosophila melanogaster, GI24650054, Length=391, Percent_Identity=24.5524296675192, Blast_Score=93, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR011013
- InterPro:   IPR000322
- InterPro:   IPR017853 [H]

Pfam domain/function: PF01055 Glyco_hydro_31 [H]

EC number: NA

Molecular weight: Translated: 78630; Mature: 78498

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFIKQDPHRLVWQQDDRYLWIEAWGENSLRVRSGRHLPVMRNENWALTQDPGDAVAHIT
CCCCCCCCCCCCEECCCCEEEEEECCCCCEEEECCCCCCEEECCCEEEECCCCCEEEEEE
WDEKQATLRNGKITAIVNLQGQLSFWRNDDKCLLQEFWRQRGEIGEDESAHGQYVSALNL
ECCCHHHHCCCCEEEEEEECCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEHEECC
QAREFKPIPGGKFTIKARFEANDGEKLFGMGQYQQPNLDLKGCMLELAQRNSQASVPFLL
CHHHCCCCCCCEEEEEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCEEE
SNQGYGFLWNNPAIGRVTFAQNGTEWVAEVSEQLDYWITAGDTPAEISEAYARVTGTPPM
CCCCCEEEECCCCCEEEEECCCCHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHCCCCCC
MPDYAMGFWQCKLRYRNQQELLEVARGYKQRNLPISVIVIDFFHWPNQGDWMFDLRDWPD
CCHHHCCEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCEEEECCCCCC
PDAMIAELKEMGIELMVSFWPTVDNRTESYREMKENGWLVHTERGLPINMDFLGNTTFFD
HHHHHHHHHHCCHHEEEECCCCCCCHHHHHHHHHHCCCEEEECCCCEEEEEECCCCEEEE
ATHPGAREYVWNKAKRNYYDKGVKLFWLDEAEPEFGVYDYDNYRYYAGPVLEVGNIYPRM
CCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEECCCEEEECCCEEECCCCCHHH
YAKTFFDGMQAAGEKQVINLLRCAWAGSQKYGALVWSGDIHSSFRSLRNQFAAGLNMGIA
HHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCC
GIPWWTTDIGGFHGGNIHDPKFHELLIRWFQWGVFSPVMRLHGNRDPQVLPEQPYRDGIA
CCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH
QCPTGAPNEVWSYGEETGEILTSCLQLREKLKPYISKIMAETHEKNSPVMRTMFFEFPDQ
HCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHEECCCCC
AESWNIYDQYCFGPDLLVAPVMHEGTRSRDVWLPAGETWIDFYTHEHYAGGQKLHHCAPL
CCCCCCCHHHCCCCCCEEEHHHHCCCCCCEEEECCCCCEEEEECCCCCCCCCHHHHCCCH
HQIPVFIREKGKYRQLLPV
HHCCHHEECCCCCCCCCCC
>Mature Secondary Structure 
SFIKQDPHRLVWQQDDRYLWIEAWGENSLRVRSGRHLPVMRNENWALTQDPGDAVAHIT
CCCCCCCCCCCEECCCCEEEEEECCCCCEEEECCCCCCEEECCCEEEECCCCCEEEEEE
WDEKQATLRNGKITAIVNLQGQLSFWRNDDKCLLQEFWRQRGEIGEDESAHGQYVSALNL
ECCCHHHHCCCCEEEEEEECCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEHEECC
QAREFKPIPGGKFTIKARFEANDGEKLFGMGQYQQPNLDLKGCMLELAQRNSQASVPFLL
CHHHCCCCCCCEEEEEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCEEE
SNQGYGFLWNNPAIGRVTFAQNGTEWVAEVSEQLDYWITAGDTPAEISEAYARVTGTPPM
CCCCCEEEECCCCCEEEEECCCCHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHCCCCCC
MPDYAMGFWQCKLRYRNQQELLEVARGYKQRNLPISVIVIDFFHWPNQGDWMFDLRDWPD
CCHHHCCEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCEEEECCCCCC
PDAMIAELKEMGIELMVSFWPTVDNRTESYREMKENGWLVHTERGLPINMDFLGNTTFFD
HHHHHHHHHHCCHHEEEECCCCCCCHHHHHHHHHHCCCEEEECCCCEEEEEECCCCEEEE
ATHPGAREYVWNKAKRNYYDKGVKLFWLDEAEPEFGVYDYDNYRYYAGPVLEVGNIYPRM
CCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEECCCEEEECCCEEECCCCCHHH
YAKTFFDGMQAAGEKQVINLLRCAWAGSQKYGALVWSGDIHSSFRSLRNQFAAGLNMGIA
HHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCC
GIPWWTTDIGGFHGGNIHDPKFHELLIRWFQWGVFSPVMRLHGNRDPQVLPEQPYRDGIA
CCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH
QCPTGAPNEVWSYGEETGEILTSCLQLREKLKPYISKIMAETHEKNSPVMRTMFFEFPDQ
HCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHEECCCCC
AESWNIYDQYCFGPDLLVAPVMHEGTRSRDVWLPAGETWIDFYTHEHYAGGQKLHHCAPL
CCCCCCCHHHCCCCCCEEEHHHHCCCCCCEEEECCCCCEEEEECCCCCCCCCHHHHCCCH
HQIPVFIREKGKYRQLLPV
HHCCHHEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7808389 [H]