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The map label for this gene is yfcV [H]

Identifier: 170681149

GI number: 170681149

Start: 2543891

End: 2544457

Strand: Reverse

Name: yfcV [H]

Synonym: EcSMS35_2497

Alternate gene names: 170681149

Gene position: 2544457-2543891 (Counterclockwise)

Preceding gene: 170681812

Following gene: 170679648

Centisome position: 50.2

GC content: 51.32

Gene sequence:

>567_bases
ATGAGTAAGTTTGCCAAAACAGCCATTGCTGCGGCGATGGTCATGGGCGCAGTTGTTTCCAGTTCTGCATTTGCAGCAGG
CAACAACGGTACCGCGCGCTTCTACGGCACCATTGAAGACTCCCCGTGCTCTATCGTTCCAGACGATCACAAACTGGAAG
TCGATATGGGTGACATCGGTGCGGCTAAACTGACCGGCGGTGGCACCACCACACCGAAAGATTTCCAGATCCGTTTACAG
GACTGCGTGTTTTCCACTGAAACAAACATGGAGACCACGTTCACCGGTACTAACTACGCGGGGCCAGCCAACACAGATAA
CTATGCGTTATTCAACGTTGACAGCGGTGTTGCCATGAAGAATGTGAGCCTGGTGATCGGCGATACCCATGGCAAAGGTT
ATAAAGTGGGCGAAAAGATTGTTCAGCCAATCGTGATGGATGCTTCAACCAGCAAAGGTAAAGACAAGCAAACGCTGAAC
TTTAAAGCCTGGCTGGTGGGTGAAACCGAAGCGCCGGATCTCGGCCAGTTCGAAACCCTGACCACATTCCAGATTACCTA
TCTCTGA

Upstream 100 bases:

>100_bases
GTGTATATGTTCAATGGCTAACTATAAATATCGGGCATAATATATATTAATTTTATGTCAGGTGTTTATATTATAACTCT
TAATGATTTAAGGACAAATA

Downstream 100 bases:

>100_bases
TGTGACAACCCCACAGCGTTCTGCTGTGGGGTTTTTCAACACGCAACAGATTTACGACTGTTTCACAAACGGATATGTGT
ATGCCTAATCACTCAAATTT

Product: fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MSKFAKTAIAAAMVMGAVVSSSAFAAGNNGTARFYGTIEDSPCSIVPDDHKLEVDMGDIGAAKLTGGGTTTPKDFQIRLQ
DCVFSTETNMETTFTGTNYAGPANTDNYALFNVDSGVAMKNVSLVIGDTHGKGYKVGEKIVQPIVMDASTSKGKDKQTLN
FKAWLVGETEAPDLGQFETLTTFQITYL

Sequences:

>Translated_188_residues
MSKFAKTAIAAAMVMGAVVSSSAFAAGNNGTARFYGTIEDSPCSIVPDDHKLEVDMGDIGAAKLTGGGTTTPKDFQIRLQ
DCVFSTETNMETTFTGTNYAGPANTDNYALFNVDSGVAMKNVSLVIGDTHGKGYKVGEKIVQPIVMDASTSKGKDKQTLN
FKAWLVGETEAPDLGQFETLTTFQITYL
>Mature_187_residues
SKFAKTAIAAAMVMGAVVSSSAFAAGNNGTARFYGTIEDSPCSIVPDDHKLEVDMGDIGAAKLTGGGTTTPKDFQIRLQD
CVFSTETNMETTFTGTNYAGPANTDNYALFNVDSGVAMKNVSLVIGDTHGKGYKVGEKIVQPIVMDASTSKGKDKQTLNF
KAWLVGETEAPDLGQFETLTTFQITYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788680, Length=189, Percent_Identity=69.3121693121693, Blast_Score=245, Evalue=2e-66,
Organism=Escherichia coli, GI1789422, Length=102, Percent_Identity=33.3333333333333, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 19932; Mature: 19800

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKFAKTAIAAAMVMGAVVSSSAFAAGNNGTARFYGTIEDSPCSIVPDDHKLEVDMGDIG
CCHHHHHHHHHHHHHHHHHHCCEEECCCCCEEEEEEEECCCCCEECCCCCEEEEECCCCC
AAKLTGGGTTTPKDFQIRLQDCVFSTETNMETTFTGTNYAGPANTDNYALFNVDSGVAMK
EEEECCCCCCCCCCEEEEEEHEEEECCCCCEEEECCCCCCCCCCCCCEEEEEECCCCEEE
NVSLVIGDTHGKGYKVGEKIVQPIVMDASTSKGKDKQTLNFKAWLVGETEAPDLGQFETL
EEEEEEECCCCCCEEHHHHHHHHEEECCCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEE
TTFQITYL
EEEEEEEC
>Mature Secondary Structure 
SKFAKTAIAAAMVMGAVVSSSAFAAGNNGTARFYGTIEDSPCSIVPDDHKLEVDMGDIG
CHHHHHHHHHHHHHHHHHHCCEEECCCCCEEEEEEEECCCCCEECCCCCEEEEECCCCC
AAKLTGGGTTTPKDFQIRLQDCVFSTETNMETTFTGTNYAGPANTDNYALFNVDSGVAMK
EEEECCCCCCCCCCEEEEEEHEEEECCCCCEEEECCCCCCCCCCCCCEEEEEECCCCEEE
NVSLVIGDTHGKGYKVGEKIVQPIVMDASTSKGKDKQTLNFKAWLVGETEAPDLGQFETL
EEEEEEECCCCCCEEHHHHHHHHEEECCCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEE
TTFQITYL
EEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]