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The map label for this gene is yfcU [H]

Identifier: 170679648

GI number: 170679648

Start: 2541162

End: 2543810

Strand: Reverse

Name: yfcU [H]

Synonym: EcSMS35_2496

Alternate gene names: 170679648

Gene position: 2543810-2541162 (Counterclockwise)

Preceding gene: 170681149

Following gene: 170680090

Centisome position: 50.19

GC content: 54.66

Gene sequence:

>2649_bases
ATGCCTAATCACTCAAATTTTCGGCTGCGGGGAATCGCCTGCTATATTGCGCTGGCAATCTCAGGTGGATCAGTCAATGC
ATGGGCTGATGATTCCATTCAATTTGACCCCCGTTTCCTTGAGTTAAAGGGCGACACGAAAATTGATCTCGGTAAGTTTT
CAAAAAAAGGGTATGTCGACGCGGGAAAATATAATTTACGTGTATTTATAAATAAACAACCCCTTTCTGATGAATACGAC
ATTAACTGGTATGTTTCTGAAAACGATCCAACAAAAACGTATGCCTGCCTGACACCTGAGTTAGTGGCGGCGCTGGGGCT
GAAAGAAGGGATAGCAAAAAGCCTGCAGTGGACGCACAACGATGAATGCCTTAAACCGGGGCAATTAGATGGGATGGAAG
TCGAGAATGATTTAAGCCAGTCGGCGTTGCTGCTGACAGTGCCACAGGCTTATCTCGAATATACCAGCAGCGACTGGGAC
CCACCCTCACGCTGGGACGACGGTATTCCTGGCCTGATTGCCGACTACAGCCTCAATGCGCAAACCCGCCACCAGGAGCA
GGGTGGCGAGGACTCACATGATATCAGCGGCAACGGTACCGTTGGGGCGAACCTGGGGGCATGGCGTTTCCGCGCAGACT
GGCAAAGTGATTATCAGCACACCCGCAGCAACGATGACGACGATGACAGCAGTAACAGTACAACGAGCAAAAACTGGGAC
TGGAGCCGTTATTACGCCTGGCGGGCCTTACCCTCTTTAAAAGCGAAGCTGTCGCTGGGGGAAGATTATCTCAATTCCGA
TATTTTCGACGGCTTTAACTATATTGGCAGCAGCGTCAGCACCGATGACCAGATGCTGCCGCCCAACCTGCGCGGCTATG
CGCCGGATGTCTCCGGCGTGGCGCACAGCAGTGCAAAAGTCACCATTAGCCAGATGGGCCGGGTACTTTACGAAACCCAG
GTTCCCGCCGGGCCATTCCGCATTCAGGATATCGGCGACTCCGTCTCCGGCACACTGCACGTCCGCGTTGAAGAACAGAA
TGGTCAGGTGCAGGAATATGACGTTACGACCGCATCTATGCCATTCCTCACGCGCCAGGGGCAGGTGCGTTACAAAGTGA
TGATGGGGCGTCCGGAAGACTGGAACCACAAGACCGAAGGCGGCTTTTTCTCCGGCGGAGAAGCGTCATGGGGGGTGGCA
GATGGCTGGTCGCTCTACGGTGGCGCGCTGGCAGATGAACACTACCAGTCGGCGGCGATGGGGGTGGGGCGCGACCTCGC
ACAGTTTGGCGCGCTGGCGTTCGATGTGACTCACTCGCACGTCAACCTGGATCATGACAGCGCATACGGCAAAGGAAAAC
TGGACGGCAACTCCTTTCGCGTGAGCTATGCCAAAGACTTTGACGAACTCAACAGCCGCGTCACCTTTGCAGGCTACCGT
TTTTCTGAAAAGAACTTCATGACCATGAGCGAGTATCTGGACGCGAACCAGTCGGACATGGCGCGGACCGGTAACGACAA
AGAGATGTATACGATCACCTATAACCAGAACTTTGCCGCTGCGGGTGTCTCGATCTATCTCAACTACTCCCATCGTACTT
ACTGGGATCGCCCGGAACAGACAAACTATAACCTGATGTTTTCCCACTATTTTAATATGGGGAGCATTCGCAACGTGAGC
ATCTCGGTGACCGGCTATCGCTACGAATATGACGATAACGCGGATAAGGGGATGTACCTCAGCATGAGCATTCCGTGGAG
CGACAGCAGCACCGTGACCTACAACGGTTCCTACGGCAGCGGGTCGGACAGCAGCCAGGTCGGTTACTTTAAGCGCGTTG
ATGACGCAACGCACTACCAGGTTAACGTCGGTACCAGCGAACAGCACGGCAGCGTGGATGGTTATCTGAGTCACGACGGC
TCGCTGGCGAAGGTTGATCTCAGCGCCAACTACCATGAGGGGGAATACCGCTCGGCGGGGATCGCCTTACAGGGCGGGGC
AACGCTGACCGCGCATGGTGGGGCGCTGCATCGCACTCAAAGCATGGGCGGTACGCGCCTGCTGATTGACGCCGACGGGA
TTGCCAATGTGCCGGTCGAAAGCAACGGCGCGCCGGTGTACACCAATATGTTTGGCAAGGCGGTGGTCGCCGATATTAAC
AACTACTATCGCAATCAGGCGTATATCGATTTAAACAACCTGCCAGAAGATGCGGAAGCCACCCAGTCGGTGGTACAGGC
AACCCTGACGGAAGGTGCAATTGGCTATCGCAAATTCAAAGTGATCAGCGGGCAAAAAGCGATGGCGGTACTGCGGTTGC
GTGACGGCAGCTACCCGCCGTTTGGCGCGGAAGTGAAAAACGACGAGCAGCAGCAGGTTGGCATTGTGGATGATGAAGGC
AATGTCTATCTGGCGGGAGTCAATGCGGGTGAGCATATGACGGTGTTCTGGGAAGGCAGCGCACAATGCGAGATCGTATT
GCCGAAGCCGCTACCTGCCGATCTGTTCAGCGGCCTGTTGTTGCCGTGTGAACAAAAGGGAACGGCAGCCCCTGATTCTT
CAGCGCCAGAAATTAAGCCTGTTATTCAGGACCAGACGCGGCAAGTCACACCAACGGAAGCGCCGACGTCAATTTCAGCT
ACTCAATAA

Upstream 100 bases:

>100_bases
TCCAGATTACCTATCTCTGATGTGACAACCCCACAGCGTTCTGCTGTGGGGTTTTTCAACACGCAACAGATTTACGACTG
TTTCACAAACGGATATGTGT

Downstream 100 bases:

>100_bases
TCTGATTAAGGAACGATCAATGTCTTATAAATTATCCAGTTCAATGGTCGTCAGCACGGCGCTGGCGGCACTGCTTTCCA
CCGTCAGCCTGGCGGCGCAC

Product: fimbrial usher protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 882; Mature: 881

Protein sequence:

>882_residues
MPNHSNFRLRGIACYIALAISGGSVNAWADDSIQFDPRFLELKGDTKIDLGKFSKKGYVDAGKYNLRVFINKQPLSDEYD
INWYVSENDPTKTYACLTPELVAALGLKEGIAKSLQWTHNDECLKPGQLDGMEVENDLSQSALLLTVPQAYLEYTSSDWD
PPSRWDDGIPGLIADYSLNAQTRHQEQGGEDSHDISGNGTVGANLGAWRFRADWQSDYQHTRSNDDDDDSSNSTTSKNWD
WSRYYAWRALPSLKAKLSLGEDYLNSDIFDGFNYIGSSVSTDDQMLPPNLRGYAPDVSGVAHSSAKVTISQMGRVLYETQ
VPAGPFRIQDIGDSVSGTLHVRVEEQNGQVQEYDVTTASMPFLTRQGQVRYKVMMGRPEDWNHKTEGGFFSGGEASWGVA
DGWSLYGGALADEHYQSAAMGVGRDLAQFGALAFDVTHSHVNLDHDSAYGKGKLDGNSFRVSYAKDFDELNSRVTFAGYR
FSEKNFMTMSEYLDANQSDMARTGNDKEMYTITYNQNFAAAGVSIYLNYSHRTYWDRPEQTNYNLMFSHYFNMGSIRNVS
ISVTGYRYEYDDNADKGMYLSMSIPWSDSSTVTYNGSYGSGSDSSQVGYFKRVDDATHYQVNVGTSEQHGSVDGYLSHDG
SLAKVDLSANYHEGEYRSAGIALQGGATLTAHGGALHRTQSMGGTRLLIDADGIANVPVESNGAPVYTNMFGKAVVADIN
NYYRNQAYIDLNNLPEDAEATQSVVQATLTEGAIGYRKFKVISGQKAMAVLRLRDGSYPPFGAEVKNDEQQQVGIVDDEG
NVYLAGVNAGEHMTVFWEGSAQCEIVLPKPLPADLFSGLLLPCEQKGTAAPDSSAPEIKPVIQDQTRQVTPTEAPTSISA
TQ

Sequences:

>Translated_882_residues
MPNHSNFRLRGIACYIALAISGGSVNAWADDSIQFDPRFLELKGDTKIDLGKFSKKGYVDAGKYNLRVFINKQPLSDEYD
INWYVSENDPTKTYACLTPELVAALGLKEGIAKSLQWTHNDECLKPGQLDGMEVENDLSQSALLLTVPQAYLEYTSSDWD
PPSRWDDGIPGLIADYSLNAQTRHQEQGGEDSHDISGNGTVGANLGAWRFRADWQSDYQHTRSNDDDDDSSNSTTSKNWD
WSRYYAWRALPSLKAKLSLGEDYLNSDIFDGFNYIGSSVSTDDQMLPPNLRGYAPDVSGVAHSSAKVTISQMGRVLYETQ
VPAGPFRIQDIGDSVSGTLHVRVEEQNGQVQEYDVTTASMPFLTRQGQVRYKVMMGRPEDWNHKTEGGFFSGGEASWGVA
DGWSLYGGALADEHYQSAAMGVGRDLAQFGALAFDVTHSHVNLDHDSAYGKGKLDGNSFRVSYAKDFDELNSRVTFAGYR
FSEKNFMTMSEYLDANQSDMARTGNDKEMYTITYNQNFAAAGVSIYLNYSHRTYWDRPEQTNYNLMFSHYFNMGSIRNVS
ISVTGYRYEYDDNADKGMYLSMSIPWSDSSTVTYNGSYGSGSDSSQVGYFKRVDDATHYQVNVGTSEQHGSVDGYLSHDG
SLAKVDLSANYHEGEYRSAGIALQGGATLTAHGGALHRTQSMGGTRLLIDADGIANVPVESNGAPVYTNMFGKAVVADIN
NYYRNQAYIDLNNLPEDAEATQSVVQATLTEGAIGYRKFKVISGQKAMAVLRLRDGSYPPFGAEVKNDEQQQVGIVDDEG
NVYLAGVNAGEHMTVFWEGSAQCEIVLPKPLPADLFSGLLLPCEQKGTAAPDSSAPEIKPVIQDQTRQVTPTEAPTSISA
TQ
>Mature_881_residues
PNHSNFRLRGIACYIALAISGGSVNAWADDSIQFDPRFLELKGDTKIDLGKFSKKGYVDAGKYNLRVFINKQPLSDEYDI
NWYVSENDPTKTYACLTPELVAALGLKEGIAKSLQWTHNDECLKPGQLDGMEVENDLSQSALLLTVPQAYLEYTSSDWDP
PSRWDDGIPGLIADYSLNAQTRHQEQGGEDSHDISGNGTVGANLGAWRFRADWQSDYQHTRSNDDDDDSSNSTTSKNWDW
SRYYAWRALPSLKAKLSLGEDYLNSDIFDGFNYIGSSVSTDDQMLPPNLRGYAPDVSGVAHSSAKVTISQMGRVLYETQV
PAGPFRIQDIGDSVSGTLHVRVEEQNGQVQEYDVTTASMPFLTRQGQVRYKVMMGRPEDWNHKTEGGFFSGGEASWGVAD
GWSLYGGALADEHYQSAAMGVGRDLAQFGALAFDVTHSHVNLDHDSAYGKGKLDGNSFRVSYAKDFDELNSRVTFAGYRF
SEKNFMTMSEYLDANQSDMARTGNDKEMYTITYNQNFAAAGVSIYLNYSHRTYWDRPEQTNYNLMFSHYFNMGSIRNVSI
SVTGYRYEYDDNADKGMYLSMSIPWSDSSTVTYNGSYGSGSDSSQVGYFKRVDDATHYQVNVGTSEQHGSVDGYLSHDGS
LAKVDLSANYHEGEYRSAGIALQGGATLTAHGGALHRTQSMGGTRLLIDADGIANVPVESNGAPVYTNMFGKAVVADINN
YYRNQAYIDLNNLPEDAEATQSVVQATLTEGAIGYRKFKVISGQKAMAVLRLRDGSYPPFGAEVKNDEQQQVGIVDDEGN
VYLAGVNAGEHMTVFWEGSAQCEIVLPKPLPADLFSGLLLPCEQKGTAAPDSSAPEIKPVIQDQTRQVTPTEAPTSISAT
Q

Specific function: Involved in the export and assembly of a fimbrial subunit across the outer membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial export usher family [H]

Homologues:

Organism=Escherichia coli, GI87081778, Length=847, Percent_Identity=35.655253837072, Blast_Score=497, Evalue=1e-141,
Organism=Escherichia coli, GI1790772, Length=887, Percent_Identity=27.1702367531003, Blast_Score=293, Evalue=4e-80,
Organism=Escherichia coli, GI1787172, Length=863, Percent_Identity=28.1575898030127, Blast_Score=286, Evalue=5e-78,
Organism=Escherichia coli, GI1789533, Length=827, Percent_Identity=28.7787182587666, Blast_Score=281, Evalue=1e-76,
Organism=Escherichia coli, GI1786332, Length=860, Percent_Identity=26.1627906976744, Blast_Score=248, Evalue=1e-66,
Organism=Escherichia coli, GI1786744, Length=879, Percent_Identity=25.2559726962457, Blast_Score=247, Evalue=2e-66,
Organism=Escherichia coli, GI1788427, Length=782, Percent_Identity=26.2148337595908, Blast_Score=205, Evalue=1e-53,
Organism=Escherichia coli, GI1789610, Length=678, Percent_Identity=23.4513274336283, Blast_Score=121, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000015
- InterPro:   IPR018030 [H]

Pfam domain/function: PF00577 Usher [H]

EC number: NA

Molecular weight: Translated: 97073; Mature: 96942

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS01151 FIMBRIAL_USHER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNHSNFRLRGIACYIALAISGGSVNAWADDSIQFDPRFLELKGDTKIDLGKFSKKGYVD
CCCCCCEEEEEEEEEEEEEEECCCEECCCCCCEEECCEEEEECCCCEEECCCCCCCCCEE
AGKYNLRVFINKQPLSDEYDINWYVSENDPTKTYACLTPELVAALGLKEGIAKSLQWTHN
CCCEEEEEEEECCCCCCCCEEEEEECCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCC
DECLKPGQLDGMEVENDLSQSALLLTVPQAYLEYTSSDWDPPSRWDDGIPGLIADYSLNA
CCCCCCCCCCCEECCCCCCCCEEEEEECHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCC
QTRHQEQGGEDSHDISGNGTVGANLGAWRFRADWQSDYQHTRSNDDDDDSSNSTTSKNWD
CHHHHHCCCCCCCCCCCCCEECCCCCCEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCC
WSRYYAWRALPSLKAKLSLGEDYLNSDIFDGFNYIGSSVSTDDQMLPPNLRGYAPDVSGV
HHHEEEECCCCCHHEEEECCHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
AHSSAKVTISQMGRVLYETQVPAGPFRIQDIGDSVSGTLHVRVEEQNGQVQEYDVTTASM
CCCCCEEEHHHHCCEEEECCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEEEEECCC
PFLTRQGQVRYKVMMGRPEDWNHKTEGGFFSGGEASWGVADGWSLYGGALADEHYQSAAM
CEEECCCCEEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCHHCCCCCCHHHHHHHHH
GVGRDLAQFGALAFDVTHSHVNLDHDSAYGKGKLDGNSFRVSYAKDFDELNSRVTFAGYR
HCCHHHHHHCCEEEEEEECEEECCCCCCCCCCCCCCCEEEEEHHHCHHHHCCEEEEEEEE
FSEKNFMTMSEYLDANQSDMARTGNDKEMYTITYNQNFAAAGVSIYLNYSHRTYWDRPEQ
ECCCCCEEHHHHHCCCCHHHHHCCCCCEEEEEEECCCEEECCEEEEEEECCCEECCCCCC
TNYNLMFSHYFNMGSIRNVSISVTGYRYEYDDNADKGMYLSMSIPWSDSSTVTYNGSYGS
CCCEEEEEEECCCCCEEEEEEEEEEEEEEECCCCCCCEEEEEECCCCCCCEEEECCCCCC
GSDSSQVGYFKRVDDATHYQVNVGTSEQHGSVDGYLSHDGSLAKVDLSANYHEGEYRSAG
CCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCC
IALQGGATLTAHGGALHRTQSMGGTRLLIDADGIANVPVESNGAPVYTNMFGKAVVADIN
EEEECCEEEEECCCCEEEHHCCCCEEEEEECCCCEECCCCCCCCEEEEHHCCCHHHHHHH
NYYRNQAYIDLNNLPEDAEATQSVVQATLTEGAIGYRKFKVISGQKAMAVLRLRDGSYPP
HHHCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEEECCCCCC
FGAEVKNDEQQQVGIVDDEGNVYLAGVNAGEHMTVFWEGSAQCEIVLPKPLPADLFSGLL
CCCCCCCCCHHCCCEEECCCCEEEEEECCCCEEEEEECCCCEEEEEECCCCCHHHHCCCE
LPCEQKGTAAPDSSAPEIKPVIQDQTRQVTPTEAPTSISATQ
EECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PNHSNFRLRGIACYIALAISGGSVNAWADDSIQFDPRFLELKGDTKIDLGKFSKKGYVD
CCCCCEEEEEEEEEEEEEEECCCEECCCCCCEEECCEEEEECCCCEEECCCCCCCCCEE
AGKYNLRVFINKQPLSDEYDINWYVSENDPTKTYACLTPELVAALGLKEGIAKSLQWTHN
CCCEEEEEEEECCCCCCCCEEEEEECCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCC
DECLKPGQLDGMEVENDLSQSALLLTVPQAYLEYTSSDWDPPSRWDDGIPGLIADYSLNA
CCCCCCCCCCCEECCCCCCCCEEEEEECHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCC
QTRHQEQGGEDSHDISGNGTVGANLGAWRFRADWQSDYQHTRSNDDDDDSSNSTTSKNWD
CHHHHHCCCCCCCCCCCCCEECCCCCCEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCC
WSRYYAWRALPSLKAKLSLGEDYLNSDIFDGFNYIGSSVSTDDQMLPPNLRGYAPDVSGV
HHHEEEECCCCCHHEEEECCHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
AHSSAKVTISQMGRVLYETQVPAGPFRIQDIGDSVSGTLHVRVEEQNGQVQEYDVTTASM
CCCCCEEEHHHHCCEEEECCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEEEEECCC
PFLTRQGQVRYKVMMGRPEDWNHKTEGGFFSGGEASWGVADGWSLYGGALADEHYQSAAM
CEEECCCCEEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCHHCCCCCCHHHHHHHHH
GVGRDLAQFGALAFDVTHSHVNLDHDSAYGKGKLDGNSFRVSYAKDFDELNSRVTFAGYR
HCCHHHHHHCCEEEEEEECEEECCCCCCCCCCCCCCCEEEEEHHHCHHHHCCEEEEEEEE
FSEKNFMTMSEYLDANQSDMARTGNDKEMYTITYNQNFAAAGVSIYLNYSHRTYWDRPEQ
ECCCCCEEHHHHHCCCCHHHHHCCCCCEEEEEEECCCEEECCEEEEEEECCCEECCCCCC
TNYNLMFSHYFNMGSIRNVSISVTGYRYEYDDNADKGMYLSMSIPWSDSSTVTYNGSYGS
CCCEEEEEEECCCCCEEEEEEEEEEEEEEECCCCCCCEEEEEECCCCCCCEEEECCCCCC
GSDSSQVGYFKRVDDATHYQVNVGTSEQHGSVDGYLSHDGSLAKVDLSANYHEGEYRSAG
CCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCC
IALQGGATLTAHGGALHRTQSMGGTRLLIDADGIANVPVESNGAPVYTNMFGKAVVADIN
EEEECCEEEEECCCCEEEHHCCCCEEEEEECCCCEECCCCCCCCEEEEHHCCCHHHHHHH
NYYRNQAYIDLNNLPEDAEATQSVVQATLTEGAIGYRKFKVISGQKAMAVLRLRDGSYPP
HHHCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEEECCCCCC
FGAEVKNDEQQQVGIVDDEGNVYLAGVNAGEHMTVFWEGSAQCEIVLPKPLPADLFSGLL
CCCCCCCCCHHCCCEEECCCCEEEEEECCCCEEEEEECCCCEEEEEECCCCCHHHHCCCE
LPCEQKGTAAPDSSAPEIKPVIQDQTRQVTPTEAPTSISATQ
EECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]