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The map label for this gene is yhfW [H]

Identifier: 170680107

GI number: 170680107

Start: 3715506

End: 3716732

Strand: Reverse

Name: yhfW [H]

Synonym: EcSMS35_3656

Alternate gene names: 170680107

Gene position: 3716732-3715506 (Counterclockwise)

Preceding gene: 170684172

Following gene: 170680454

Centisome position: 73.33

GC content: 54.44

Gene sequence:

>1227_bases
ATGGCGCGATTTGTGGTGTTAGTGATTGATAGCTTTGGCGTAGGCGCAATGAAAGATGTCACGCTGGTGCGTCCACAGGA
TGCCGGGGCGAATACTTGTGGTCACATCCTGAGCCAGCTGCCGCATTTGCAGCTACCAACGCTGGAGAAGTTGGGGCTAA
TCAACGCATTGGGTTATGCGCCAGGTGATATGCAGCCGTCAGACTCCGCAACCTGGGGTGTGGCAGAGCTGCAACATGAA
GGTGGCGATACCTTTATGGGGCATCAGGAAATTTTAGGCACGCGCCCGTTACCACCGCTGCGGATGCCTTTTCGCGATGT
GATTGACCGTGTTGAGCAGGCATTAGTTTCCGCCGCTTGGCAGGTGGAGCGCCGTGGCGAAGAGTTGCAATTTCTGTGGG
TCAATCAGGCGGTTGCGATTGGCGATAATCTCGAGGCGGATTTAGGCCAGGTCTATAACATCACCGCCAATCTCTCTGTG
GTCTCTTTTGACGACGCAATCAAAATTGGTCGTATCGTGCGTGAGCAGGTACCGGTCGGGCGGGTCATTACATTTGGCGG
CCTGTTAACCGACAGTCAACGCATTCTCGATGCCGCAGAAAGCAAAGAAGGGCGCTTTATTGGCATCAACGCGCCGCGTT
CTGGCGCTTATGACAACGGTTTCCAGGTCGTGCATATGGGCTATGGCGTCGATGAAAAAGTGCAGGTACCACAAAAACTG
TATGAAGCAGGCGTGCCAACCGTGCTGGTGGGTAAGGTGGCAGATATCGTCAACAATCCTTATGGCGTGAGCTGGCAAAA
CCTGGTGGATAGCCAGCGGATTATGGATATCACCCTCGACGAATTTATCACCCATCAGACAGCGTTTATTTGCACCAACA
TTCAGGAAACCGACCTCGCTGGTCACGCAGAAGACGTCGCACGTTATGCTGAACGTTTGCAGGTCGTTGACCGTAATCTT
GCTCTCCTGGTTGAGACGATGCAGCCAGATGATTGCCTGGTCGTGATGGCGGATCACGGTAACGATCCGACAATCGGTCA
CAGCCACCATACCCGCGAAGTCGTGCCGGTGCTGGTTTATCAGCAAGGCCTGGCTGCCACGCAGCTTGGTGTTCGCACCA
CGCTCTCCGATGTGGGCGCTACCGTGTGTGAATTCTTCCGTGCGCCACCGCCACAAAATGGTCGCTCTTTTCTTTCCTCC
CTCCGGTTTGCAGGAGACACCCTATGA

Upstream 100 bases:

>100_bases
TTGTCACCCGTAGCGATGTGGTGTTGCTGTCCGGTATTCACCGTGGCGAACCGGAAATCGTCGGTCGTTATGACAGTCTT
GGAAACTCTCTGGGGGCGTA

Downstream 100 bases:

>100_bases
GTTTTGATCCGACGGGTTACACCCTGGCCCATGAGCATCTGCATATTGATCTTTCCGGCTTTAAAAACAACGTGGACTGC
CGCCTTGATCAGTATGCGTT

Product: putative mutase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MARFVVLVIDSFGVGAMKDVTLVRPQDAGANTCGHILSQLPHLQLPTLEKLGLINALGYAPGDMQPSDSATWGVAELQHE
GGDTFMGHQEILGTRPLPPLRMPFRDVIDRVEQALVSAAWQVERRGEELQFLWVNQAVAIGDNLEADLGQVYNITANLSV
VSFDDAIKIGRIVREQVPVGRVITFGGLLTDSQRILDAAESKEGRFIGINAPRSGAYDNGFQVVHMGYGVDEKVQVPQKL
YEAGVPTVLVGKVADIVNNPYGVSWQNLVDSQRIMDITLDEFITHQTAFICTNIQETDLAGHAEDVARYAERLQVVDRNL
ALLVETMQPDDCLVVMADHGNDPTIGHSHHTREVVPVLVYQQGLAATQLGVRTTLSDVGATVCEFFRAPPPQNGRSFLSS
LRFAGDTL

Sequences:

>Translated_408_residues
MARFVVLVIDSFGVGAMKDVTLVRPQDAGANTCGHILSQLPHLQLPTLEKLGLINALGYAPGDMQPSDSATWGVAELQHE
GGDTFMGHQEILGTRPLPPLRMPFRDVIDRVEQALVSAAWQVERRGEELQFLWVNQAVAIGDNLEADLGQVYNITANLSV
VSFDDAIKIGRIVREQVPVGRVITFGGLLTDSQRILDAAESKEGRFIGINAPRSGAYDNGFQVVHMGYGVDEKVQVPQKL
YEAGVPTVLVGKVADIVNNPYGVSWQNLVDSQRIMDITLDEFITHQTAFICTNIQETDLAGHAEDVARYAERLQVVDRNL
ALLVETMQPDDCLVVMADHGNDPTIGHSHHTREVVPVLVYQQGLAATQLGVRTTLSDVGATVCEFFRAPPPQNGRSFLSS
LRFAGDTL
>Mature_407_residues
ARFVVLVIDSFGVGAMKDVTLVRPQDAGANTCGHILSQLPHLQLPTLEKLGLINALGYAPGDMQPSDSATWGVAELQHEG
GDTFMGHQEILGTRPLPPLRMPFRDVIDRVEQALVSAAWQVERRGEELQFLWVNQAVAIGDNLEADLGQVYNITANLSVV
SFDDAIKIGRIVREQVPVGRVITFGGLLTDSQRILDAAESKEGRFIGINAPRSGAYDNGFQVVHMGYGVDEKVQVPQKLY
EAGVPTVLVGKVADIVNNPYGVSWQNLVDSQRIMDITLDEFITHQTAFICTNIQETDLAGHAEDVARYAERLQVVDRNLA
LLVETMQPDDCLVVMADHGNDPTIGHSHHTREVVPVLVYQQGLAATQLGVRTTLSDVGATVCEFFRAPPPQNGRSFLSSL
RFAGDTL

Specific function: Unknown

COG id: COG1015

COG function: function code G; Phosphopentomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphopentomutase family [H]

Homologues:

Organism=Escherichia coli, GI1789781, Length=408, Percent_Identity=96.8137254901961, Blast_Score=809, Evalue=0.0,
Organism=Escherichia coli, GI1790843, Length=444, Percent_Identity=29.0540540540541, Blast_Score=113, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR010045
- InterPro:   IPR006124 [H]

Pfam domain/function: PF01676 Metalloenzyme [H]

EC number: NA

Molecular weight: Translated: 44542; Mature: 44411

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARFVVLVIDSFGVGAMKDVTLVRPQDAGANTCGHILSQLPHLQLPTLEKLGLINALGYA
CCEEEEEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCC
PGDMQPSDSATWGVAELQHEGGDTFMGHQEILGTRPLPPLRMPFRDVIDRVEQALVSAAW
CCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
QVERRGEELQFLWVNQAVAIGDNLEADLGQVYNITANLSVVSFDDAIKIGRIVREQVPVG
HHHHCCCEEEEEEECCEEEECCCCCCCCCCEEEEEEEEEEEECCHHHHHHHHHHHHCCCC
RVITFGGLLTDSQRILDAAESKEGRFIGINAPRSGAYDNGFQVVHMGYGVDEKVQVPQKL
EEEEECCEECCCHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHH
YEAGVPTVLVGKVADIVNNPYGVSWQNLVDSQRIMDITLDEFITHQTAFICTNIQETDLA
HHCCCCEEEHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCEEEECCCCHHCCC
GHAEDVARYAERLQVVDRNLALLVETMQPDDCLVVMADHGNDPTIGHSHHTREVVPVLVY
CCHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHH
QQGLAATQLGVRTTLSDVGATVCEFFRAPPPQNGRSFLSSLRFAGDTL
HCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ARFVVLVIDSFGVGAMKDVTLVRPQDAGANTCGHILSQLPHLQLPTLEKLGLINALGYA
CEEEEEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCC
PGDMQPSDSATWGVAELQHEGGDTFMGHQEILGTRPLPPLRMPFRDVIDRVEQALVSAAW
CCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
QVERRGEELQFLWVNQAVAIGDNLEADLGQVYNITANLSVVSFDDAIKIGRIVREQVPVG
HHHHCCCEEEEEEECCEEEECCCCCCCCCCEEEEEEEEEEEECCHHHHHHHHHHHHCCCC
RVITFGGLLTDSQRILDAAESKEGRFIGINAPRSGAYDNGFQVVHMGYGVDEKVQVPQKL
EEEEECCEECCCHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHH
YEAGVPTVLVGKVADIVNNPYGVSWQNLVDSQRIMDITLDEFITHQTAFICTNIQETDLA
HHCCCCEEEHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCEEEECCCCHHCCC
GHAEDVARYAERLQVVDRNLALLVETMQPDDCLVVMADHGNDPTIGHSHHTREVVPVLVY
CCHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHH
QQGLAATQLGVRTTLSDVGATVCEFFRAPPPQNGRSFLSSLRFAGDTL
HCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]