Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170079415

Identifier: 170079415

GI number: 170079415

Start: 2952481

End: 2953191

Strand: Reverse

Name: 170079415

Synonym: SYNPCC7002_A2829

Alternate gene names: NA

Gene position: 2953191-2952481 (Counterclockwise)

Preceding gene: 170079416

Following gene: 170079414

Centisome position: 98.18

GC content: 42.9

Gene sequence:

>711_bases
ATGAGGTTTAAATTCATTGCTTTTAGTACCCTGGTCAGCCTTGGCTTGGGGTTAGGCAGTTGCCAAAATCAGTCTAATCC
TTCTGCCCCTGAACCTGATGGAACAACACCTACCGATCCGACAGAAGAACCAATTCCTGTTCCCGCTGAACCATTGCCCC
TAGTCAATTCTCAAGGGGCCGATACAAAGGAAGTAGAAGCAGTAGATCAGAACTATTCTTCCCCTGATATTAGCCAAGCA
ATCATTCCGGAGCTTATGGAAAACCGGGAAGAGTTGGGGCTTTGCCAAGAGTTTAGATTTGAATCGGAGCTCACAGAAGC
GGCCTCTAATGTTTACCGCGTGGGTAAAGATGAGTATCTTGTGCACCTTGTTTGTGGCTCGACGGCCTATCAACTGCTCC
AGAATTATTTTTTATACCGAAGAGACGAAGATCAATTCGATCTGACGCCACTACCGATTACTTATTTCTACCAAGATACG
GATCAACAATTGATTAAAGAAACAGAAGTAACCAGAGCTGGGTATTCAGAATATGATCCGAGTAGCCAAACCATTAGTAT
TTTTACGAAAGGCAGAGGTTTAGGGGATTGTGGTAGCTTGGGTTTTTATCAATTTACAGGTACAGATCTCAGCTTAAATC
GGTTTCTCCTTAAAGATGAATGTGATGGTAACTATATTGAACCCATTAACTATCCTCAAGTTTATCCCTAG

Upstream 100 bases:

>100_bases
ACCTCTGCGGGACGGATGATTTTTGCGAAATTAAGTTCTTCCCTGGCTCTTTAATTAACTGGTCAATTTTCTTATGATTT
AGTGCGTGGAGGTCAGATAT

Downstream 100 bases:

>100_bases
AAAAATTATGAAGTGTTTTGCGTTAATTTGTTTAGCTCTGTGAAGTCTTAATCACTTGGCTAAAATGTCACCAAAATAGG
ACACAATGGGTAGATATATG

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MRFKFIAFSTLVSLGLGLGSCQNQSNPSAPEPDGTTPTDPTEEPIPVPAEPLPLVNSQGADTKEVEAVDQNYSSPDISQA
IIPELMENREELGLCQEFRFESELTEAASNVYRVGKDEYLVHLVCGSTAYQLLQNYFLYRRDEDQFDLTPLPITYFYQDT
DQQLIKETEVTRAGYSEYDPSSQTISIFTKGRGLGDCGSLGFYQFTGTDLSLNRFLLKDECDGNYIEPINYPQVYP

Sequences:

>Translated_236_residues
MRFKFIAFSTLVSLGLGLGSCQNQSNPSAPEPDGTTPTDPTEEPIPVPAEPLPLVNSQGADTKEVEAVDQNYSSPDISQA
IIPELMENREELGLCQEFRFESELTEAASNVYRVGKDEYLVHLVCGSTAYQLLQNYFLYRRDEDQFDLTPLPITYFYQDT
DQQLIKETEVTRAGYSEYDPSSQTISIFTKGRGLGDCGSLGFYQFTGTDLSLNRFLLKDECDGNYIEPINYPQVYP
>Mature_236_residues
MRFKFIAFSTLVSLGLGLGSCQNQSNPSAPEPDGTTPTDPTEEPIPVPAEPLPLVNSQGADTKEVEAVDQNYSSPDISQA
IIPELMENREELGLCQEFRFESELTEAASNVYRVGKDEYLVHLVCGSTAYQLLQNYFLYRRDEDQFDLTPLPITYFYQDT
DQQLIKETEVTRAGYSEYDPSSQTISIFTKGRGLGDCGSLGFYQFTGTDLSLNRFLLKDECDGNYIEPINYPQVYP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26484; Mature: 26484

Theoretical pI: Translated: 3.91; Mature: 3.91

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFKFIAFSTLVSLGLGLGSCQNQSNPSAPEPDGTTPTDPTEEPIPVPAEPLPLVNSQGA
CCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DTKEVEAVDQNYSSPDISQAIIPELMENREELGLCQEFRFESELTEAASNVYRVGKDEYL
CHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCEE
VHLVCGSTAYQLLQNYFLYRRDEDQFDLTPLPITYFYQDTDQQLIKETEVTRAGYSEYDP
EEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCCC
SSQTISIFTKGRGLGDCGSLGFYQFTGTDLSLNRFLLKDECDGNYIEPINYPQVYP
CCCEEEEEECCCCCCCCCCCCEEEEECCCCCHHHEEEECCCCCCEECCCCCCCCCC
>Mature Secondary Structure
MRFKFIAFSTLVSLGLGLGSCQNQSNPSAPEPDGTTPTDPTEEPIPVPAEPLPLVNSQGA
CCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DTKEVEAVDQNYSSPDISQAIIPELMENREELGLCQEFRFESELTEAASNVYRVGKDEYL
CHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCEE
VHLVCGSTAYQLLQNYFLYRRDEDQFDLTPLPITYFYQDTDQQLIKETEVTRAGYSEYDP
EEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCCC
SSQTISIFTKGRGLGDCGSLGFYQFTGTDLSLNRFLLKDECDGNYIEPINYPQVYP
CCCEEEEEECCCCCCCCCCCCEEEEECCCCCHHHEEEECCCCCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA