Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170079414

Identifier: 170079414

GI number: 170079414

Start: 2951373

End: 2952383

Strand: Reverse

Name: 170079414

Synonym: SYNPCC7002_A2828

Alternate gene names: NA

Gene position: 2952383-2951373 (Counterclockwise)

Preceding gene: 170079415

Following gene: 170079412

Centisome position: 98.15

GC content: 49.55

Gene sequence:

>1011_bases
ATGGTTCTATTTTTGAGTCCATTACCCATGGAACAGAAAAATCTGAAAGCTTACCTTGATTTGGTGCAAAAACTCTTAAA
CTGCCGCCGGGGTGAAGAGTGGATTGTCCTGCGGCAAAACGAGCAGTTGGTGGATGCCCAATTTATTGAAGTGATGGAAC
AGGTGGCTAACTACCTTGCGGCGGAAGGTGAACTGAATGGGGCTCGTTATCTCCACAACTGGGCGGGCAAATTACATCAC
ATTCTCACCCAACCGAATCCGGTCGCGCCCCAGCCAGATGCCATTACCCAAGCCTATGCCCAATTGATTGAAGCGCTTTT
AAATTGTCGTCGGGGAGAAGAGCAGCAGATTTTAGCGGCGAATCAAAAATTGATCACCCCGGATCTGGTGAAGTTTATGC
AGGAGGTAGCCCGGCAGTTTGAAGACCAAGGTAAATCCCAAACGGCGGCTTACCTCCAGGATTTGGCCACTGCGGTTAAT
CGTACCTGGATTCAAACTCACGATTTTCAGCCGAACTTACAAAAGGCAAATCAATTAGCCCCAGATCCTTGGGATGATGC
GCCATCAGCGACTTCCCCTGAATCTATGCCAACTGTTTCGTCATCTCAGCCTGGGACAATAGCAGGGCCAGAAGTTCTAG
AAAAAGCAGATCCTCTGCCAACGGATACCCCGACGGTGACAACAATTGCTCTAGAGGAGGTCGTGCAAAATTTAAGTGAT
CAGCTAGGGGACATGAGAACAGAAATAGCGGCGATCGCCCAGAAGCTTGCCAGAGTAGAAGCGGCTCTTTCGGAATCCCG
TCAAGCGTCTAATCCCCTCGCTTATCTCAGCGTTTTAGAACAGGCCGCCACAGCAGGTTGGATGATTTCGACGGACGAAG
TGACCCAATTGATCGGCGTTCAACCCAGTCCCAAAAAAGGGAAAAATAGCTTTGAGCGGGGCAATTGGCGGTTTGTCAAA
GCGGGTAAGATTGGTGCCCAAACCGGTTGGCACGTGGAAAAAATTCACTAA

Upstream 100 bases:

>100_bases
TAGAAAAATTATGAAGTGTTTTGCGTTAATTTGTTTAGCTCTGTGAAGTCTTAATCACTTGGCTAAAATGTCACCAAAAT
AGGACACAATGGGTAGATAT

Downstream 100 bases:

>100_bases
AGTCGGCTAAATTCAACGGTGCCATCTACTCCTTGCCAACGCAAAAGGTTGATGGGTTTGCCCGTCGTCCAAGTCGCCAT
ACCCAGGGCTTTTCGGGGGG

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MVLFLSPLPMEQKNLKAYLDLVQKLLNCRRGEEWIVLRQNEQLVDAQFIEVMEQVANYLAAEGELNGARYLHNWAGKLHH
ILTQPNPVAPQPDAITQAYAQLIEALLNCRRGEEQQILAANQKLITPDLVKFMQEVARQFEDQGKSQTAAYLQDLATAVN
RTWIQTHDFQPNLQKANQLAPDPWDDAPSATSPESMPTVSSSQPGTIAGPEVLEKADPLPTDTPTVTTIALEEVVQNLSD
QLGDMRTEIAAIAQKLARVEAALSESRQASNPLAYLSVLEQAATAGWMISTDEVTQLIGVQPSPKKGKNSFERGNWRFVK
AGKIGAQTGWHVEKIH

Sequences:

>Translated_336_residues
MVLFLSPLPMEQKNLKAYLDLVQKLLNCRRGEEWIVLRQNEQLVDAQFIEVMEQVANYLAAEGELNGARYLHNWAGKLHH
ILTQPNPVAPQPDAITQAYAQLIEALLNCRRGEEQQILAANQKLITPDLVKFMQEVARQFEDQGKSQTAAYLQDLATAVN
RTWIQTHDFQPNLQKANQLAPDPWDDAPSATSPESMPTVSSSQPGTIAGPEVLEKADPLPTDTPTVTTIALEEVVQNLSD
QLGDMRTEIAAIAQKLARVEAALSESRQASNPLAYLSVLEQAATAGWMISTDEVTQLIGVQPSPKKGKNSFERGNWRFVK
AGKIGAQTGWHVEKIH
>Mature_336_residues
MVLFLSPLPMEQKNLKAYLDLVQKLLNCRRGEEWIVLRQNEQLVDAQFIEVMEQVANYLAAEGELNGARYLHNWAGKLHH
ILTQPNPVAPQPDAITQAYAQLIEALLNCRRGEEQQILAANQKLITPDLVKFMQEVARQFEDQGKSQTAAYLQDLATAVN
RTWIQTHDFQPNLQKANQLAPDPWDDAPSATSPESMPTVSSSQPGTIAGPEVLEKADPLPTDTPTVTTIALEEVVQNLSD
QLGDMRTEIAAIAQKLARVEAALSESRQASNPLAYLSVLEQAATAGWMISTDEVTQLIGVQPSPKKGKNSFERGNWRFVK
AGKIGAQTGWHVEKIH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37218; Mature: 37218

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLFLSPLPMEQKNLKAYLDLVQKLLNCRRGEEWIVLRQNEQLVDAQFIEVMEQVANYLA
CEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH
AEGELNGARYLHNWAGKLHHILTQPNPVAPQPDAITQAYAQLIEALLNCRRGEEQQILAA
HCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHH
NQKLITPDLVKFMQEVARQFEDQGKSQTAAYLQDLATAVNRTWIQTHDFQPNLQKANQLA
CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCC
PDPWDDAPSATSPESMPTVSSSQPGTIAGPEVLEKADPLPTDTPTVTTIALEEVVQNLSD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
QLGDMRTEIAAIAQKLARVEAALSESRQASNPLAYLSVLEQAATAGWMISTDEVTQLIGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEHHHHHHHHCC
QPSPKKGKNSFERGNWRFVKAGKIGAQTGWHVEKIH
CCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEECCC
>Mature Secondary Structure
MVLFLSPLPMEQKNLKAYLDLVQKLLNCRRGEEWIVLRQNEQLVDAQFIEVMEQVANYLA
CEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH
AEGELNGARYLHNWAGKLHHILTQPNPVAPQPDAITQAYAQLIEALLNCRRGEEQQILAA
HCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHH
NQKLITPDLVKFMQEVARQFEDQGKSQTAAYLQDLATAVNRTWIQTHDFQPNLQKANQLA
CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCC
PDPWDDAPSATSPESMPTVSSSQPGTIAGPEVLEKADPLPTDTPTVTTIALEEVVQNLSD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
QLGDMRTEIAAIAQKLARVEAALSESRQASNPLAYLSVLEQAATAGWMISTDEVTQLIGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEHHHHHHHHCC
QPSPKKGKNSFERGNWRFVKAGKIGAQTGWHVEKIH
CCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA