| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079411
Identifier: 170079411
GI number: 170079411
Start: 2949400
End: 2949624
Strand: Reverse
Name: 170079411
Synonym: SYNPCC7002_A2825
Alternate gene names: NA
Gene position: 2949624-2949400 (Counterclockwise)
Preceding gene: 170079412
Following gene: 170079404
Centisome position: 98.06
GC content: 45.33
Gene sequence:
>225_bases ATGAGCGACATTGCTTTTGAAGAAACTTTTGTTGATTCTTTTGTGACCTATTCTGTGGAAATTGCCGGGAAGATTTACGT TGTGGAAAATGTTCCGGCTAGGGTCTGCCAGGAGACGGGCGAGAAATTATTTGCGCCGGAGACGGTGGATCGGTTGCAGG AAATTATCTGGGGTCAACAACCGCTCCTCAAAGTTGTAGAAACGCCTGTGTATTCTTTTTCTTGA
Upstream 100 bases:
>100_bases TCGATAAACAAACTCAATTAACGGCGATTGGTTATGAGGATTACCTCAAGCAAATGTAGTGTTTTGCAAAATGGAGGAAG TTGCTACAGGAAATTAGTAG
Downstream 100 bases:
>100_bases AACTTGTTGGTTAGGACGACAAAATATTCAGAATTATTTTAACGAGAATGGCGATCGCCGCTGCGGCAATACTGCCGAGA AGTGTGATTCTGACGTTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 74; Mature: 73
Protein sequence:
>74_residues MSDIAFEETFVDSFVTYSVEIAGKIYVVENVPARVCQETGEKLFAPETVDRLQEIIWGQQPLLKVVETPVYSFS
Sequences:
>Translated_74_residues MSDIAFEETFVDSFVTYSVEIAGKIYVVENVPARVCQETGEKLFAPETVDRLQEIIWGQQPLLKVVETPVYSFS >Mature_73_residues SDIAFEETFVDSFVTYSVEIAGKIYVVENVPARVCQETGEKLFAPETVDRLQEIIWGQQPLLKVVETPVYSFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8389; Mature: 8257
Theoretical pI: Translated: 3.95; Mature: 3.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDIAFEETFVDSFVTYSVEIAGKIYVVENVPARVCQETGEKLFAPETVDRLQEIIWGQQ CCCCHHHHHHHHHHHHHEEEECCEEEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHCCCC PLLKVVETPVYSFS HHHHHHHCCCCCCC >Mature Secondary Structure SDIAFEETFVDSFVTYSVEIAGKIYVVENVPARVCQETGEKLFAPETVDRLQEIIWGQQ CCCHHHHHHHHHHHHHEEEECCEEEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHCCCC PLLKVVETPVYSFS HHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA