Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170079389

Identifier: 170079389

GI number: 170079389

Start: 2927084

End: 2927611

Strand: Reverse

Name: 170079389

Synonym: SYNPCC7002_A2803

Alternate gene names: NA

Gene position: 2927611-2927084 (Counterclockwise)

Preceding gene: 170079390

Following gene: 170079386

Centisome position: 97.33

GC content: 38.45

Gene sequence:

>528_bases
ATGTCCAGTTACAAAGCGATTTGTGTTTGGTTAATACACTATAGTAAGAGAAATAATCAAGGATTTACCTTGATTGAATT
ACTCGTCGTTATGATTATCATTGGCATCTTATCAGCAATTTCTCTACCTGTAATGTTTAGTATGGCAGCGAAAGCACGAC
AATCTGAAGCAAAAACAACTTTATCGGTGCTTAATCGTGGCCAGCAAGCCTATTATGCAGAAAAAAGTACTTTCTCACCA
GATATTCTTAACTTAGGTGTGACTACAATTATAGAGACAAATAATTTTAGCTACGGTAATGCAGGCTCACTTGTCAATTA
TCAAACAGGTGCTGCATATGGTGCAACACCAAAAGATCCGGCCACGGTGAAAGATTATTCGGCAGGCGTAACTTCTTTAG
CAATAGCCAGAGTCCCTTTAATTATTTGTGAAGAAGAGGACCCTACCGTAGTTGGCCCATTTCCTCCTCTCTTAGATAGT
GGTGCTGGAACTTTAAGTTGTCCAGTTGGCTACATAAAATTAAGATAA

Upstream 100 bases:

>100_bases
TATGATAGAAAAAGCACCTTCTTGATTTACTTGGGGGTGCTTTTTAATTGATTCAATACATACCTTAGATTAAATTCATG
AAGCTAAAGATATACTTAAT

Downstream 100 bases:

>100_bases
GATATCAATTTAGTTGATATTTCTTTCGCATAAAGCAGTTTTCTCTAAGAGATAAATTTCTACTTATTCATATTCCGATA
AGTGGCGACGGCAGAAGGCG

Product: general secretion pathway protein

Products: NA

Alternate protein names: Pilin Polypeptide; General Secretion Pathway Protein G; HofG-Like General Secretion Pathway Protein; General Secretion Pathway Protein H; Pilin Polypeptide PilA

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MSSYKAICVWLIHYSKRNNQGFTLIELLVVMIIIGILSAISLPVMFSMAAKARQSEAKTTLSVLNRGQQAYYAEKSTFSP
DILNLGVTTIIETNNFSYGNAGSLVNYQTGAAYGATPKDPATVKDYSAGVTSLAIARVPLIICEEEDPTVVGPFPPLLDS
GAGTLSCPVGYIKLR

Sequences:

>Translated_175_residues
MSSYKAICVWLIHYSKRNNQGFTLIELLVVMIIIGILSAISLPVMFSMAAKARQSEAKTTLSVLNRGQQAYYAEKSTFSP
DILNLGVTTIIETNNFSYGNAGSLVNYQTGAAYGATPKDPATVKDYSAGVTSLAIARVPLIICEEEDPTVVGPFPPLLDS
GAGTLSCPVGYIKLR
>Mature_174_residues
SSYKAICVWLIHYSKRNNQGFTLIELLVVMIIIGILSAISLPVMFSMAAKARQSEAKTTLSVLNRGQQAYYAEKSTFSPD
ILNLGVTTIIETNNFSYGNAGSLVNYQTGAAYGATPKDPATVKDYSAGVTSLAIARVPLIICEEEDPTVVGPFPPLLDSG
AGTLSCPVGYIKLR

Specific function: Unknown

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18758; Mature: 18627

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSYKAICVWLIHYSKRNNQGFTLIELLVVMIIIGILSAISLPVMFSMAAKARQSEAKTT
CCCHHEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSVLNRGQQAYYAEKSTFSPDILNLGVTTIIETNNFSYGNAGSLVNYQTGAAYGATPKDP
HHHHHCCCHHEECCCCCCCCHHHHCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCC
ATVKDYSAGVTSLAIARVPLIICEEEDPTVVGPFPPLLDSGAGTLSCPVGYIKLR
CCCCHHHCCHHHHHHHHCCEEEECCCCCEEECCCCHHHCCCCCEEECCEEEEEEC
>Mature Secondary Structure 
SSYKAICVWLIHYSKRNNQGFTLIELLVVMIIIGILSAISLPVMFSMAAKARQSEAKTT
CCHHEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSVLNRGQQAYYAEKSTFSPDILNLGVTTIIETNNFSYGNAGSLVNYQTGAAYGATPKDP
HHHHHCCCHHEECCCCCCCCHHHHCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCC
ATVKDYSAGVTSLAIARVPLIICEEEDPTVVGPFPPLLDSGAGTLSCPVGYIKLR
CCCCHHHCCHHHHHHHHCCEEEECCCCCEEECCCCHHHCCCCCEEECCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA