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The map label for this gene is ppdD [C]

Identifier: 170079390

GI number: 170079390

Start: 2927780

End: 2928352

Strand: Reverse

Name: ppdD [C]

Synonym: SYNPCC7002_A2804

Alternate gene names: 170079390

Gene position: 2928352-2927780 (Counterclockwise)

Preceding gene: 170079394

Following gene: 170079389

Centisome position: 97.35

GC content: 43.63

Gene sequence:

>573_bases
ATGAAAAATTTCACTTTTAAGCTTCTGCAACAACTCAACAAGAAGAAAGCTGACAAAGGTTTTACCCTGATTGAACTGCT
CGTTGTAATCATCATCATCGGTATTCTGTCTGCTATCGCCCTACCTGCATTCTTGAACCAGGCTGCTAAAGCGAAACAAT
CTGAAGCAAAACAAACCCTTGGCGCACTAAACCGTGGCCAACAAGCCTATCGTCTTGAAAGTCCTGAATTCGCTCCAGAA
GTTGATCTACTTGCCCTTGGCGTCGAAATTGACACCACTAATTATGCTTACGGTGATGATGGAAGTGCTACTACTGGAAA
CGGTGAATTTGCCTTTAACTTTAACAACTTAGAGGGAACTGACTTCACAGAAACGGCAGGGATTGGTGCTCGTGCAAAAG
ATACTGCCGCAGTTCGTGACTATGATGGAGCCACTGGAGCCACTGAAGATTCAGAAGGCAATGCAACTACTGTTACTGTA
ATTTGTGAAGAAACTGCTCCACAAGATGATGATCAAGACATGAGTTATTCTTTCGCCGATGGATTAGGCTGTGATGCTGG
AAATCAGCTTTAG

Upstream 100 bases:

>100_bases
GGATTTTGTGGGGGGGTGATAGGAAAAGAAAGTGGGTGGGTAATTTAGGGTTAACGGATACATAATTCCGGTTGAAGCCG
GGATAAGGAGATGCCCCCAA

Downstream 100 bases:

>100_bases
ACATTTTGCTGCAGTGAGATCTGCGTAAATCACGAGTAGTAACTATTCTTATCCCTTCAGCGAAACTCTATGATAGAAAA
AGCACCTTCTTGATTTACTT

Product: general secretion pathway protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MKNFTFKLLQQLNKKKADKGFTLIELLVVIIIIGILSAIALPAFLNQAAKAKQSEAKQTLGALNRGQQAYRLESPEFAPE
VDLLALGVEIDTTNYAYGDDGSATTGNGEFAFNFNNLEGTDFTETAGIGARAKDTAAVRDYDGATGATEDSEGNATTVTV
ICEETAPQDDDQDMSYSFADGLGCDAGNQL

Sequences:

>Translated_190_residues
MKNFTFKLLQQLNKKKADKGFTLIELLVVIIIIGILSAIALPAFLNQAAKAKQSEAKQTLGALNRGQQAYRLESPEFAPE
VDLLALGVEIDTTNYAYGDDGSATTGNGEFAFNFNNLEGTDFTETAGIGARAKDTAAVRDYDGATGATEDSEGNATTVTV
ICEETAPQDDDQDMSYSFADGLGCDAGNQL
>Mature_190_residues
MKNFTFKLLQQLNKKKADKGFTLIELLVVIIIIGILSAIALPAFLNQAAKAKQSEAKQTLGALNRGQQAYRLESPEFAPE
VDLLALGVEIDTTNYAYGDDGSATTGNGEFAFNFNNLEGTDFTETAGIGARAKDTAAVRDYDGATGATEDSEGNATTVTV
ICEETAPQDDDQDMSYSFADGLGCDAGNQL

Specific function: Not Yet Known. [C]

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20191; Mature: 20191

Theoretical pI: Translated: 3.98; Mature: 3.98

Prosite motif: PS00409 PROKAR_NTER_METHYL ; PS00307 LECTIN_LEGUME_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNFTFKLLQQLNKKKADKGFTLIELLVVIIIIGILSAIALPAFLNQAAKAKQSEAKQTL
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GALNRGQQAYRLESPEFAPEVDLLALGVEIDTTNYAYGDDGSATTGNGEFAFNFNNLEGT
HHHHCCCHHEECCCCCCCCCCEEEEEEEEECCCCCEECCCCCCCCCCCEEEEEECCCCCC
DFTETAGIGARAKDTAAVRDYDGATGATEDSEGNATTVTVICEETAPQDDDQDMSYSFAD
CCCHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHCC
GLGCDAGNQL
CCCCCCCCCC
>Mature Secondary Structure
MKNFTFKLLQQLNKKKADKGFTLIELLVVIIIIGILSAIALPAFLNQAAKAKQSEAKQTL
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GALNRGQQAYRLESPEFAPEVDLLALGVEIDTTNYAYGDDGSATTGNGEFAFNFNNLEGT
HHHHCCCHHEECCCCCCCCCCEEEEEEEEECCCCCEECCCCCCCCCCCEEEEEECCCCCC
DFTETAGIGARAKDTAAVRDYDGATGATEDSEGNATTVTVICEETAPQDDDQDMSYSFAD
CCCHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHCC
GLGCDAGNQL
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA