| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079384
Identifier: 170079384
GI number: 170079384
Start: 2921989
End: 2924085
Strand: Reverse
Name: 170079384
Synonym: SYNPCC7002_A2798
Alternate gene names: NA
Gene position: 2924085-2921989 (Counterclockwise)
Preceding gene: 170079386
Following gene: 170079383
Centisome position: 97.21
GC content: 54.03
Gene sequence:
>2097_bases ATGGGGGCAATTTGGTTACGGGGTCAGTCGCGCTCTGGGAAAACGACGGCATTGGTGGCGCGGCTAAAAGCTTGGGTGGC AGGGCAGGATCCCCAGGCGGTATTGGTGCCGGGATTATTGGTCTTGGCGGCAAATAATCAAAATCAGCGGCTGCTGGCGG ACTTGATTCACCAAGAAATTCGCGGGAGCTATCCCTTTGTAAGTAAAACCCCAGTGGCGTTTATGGCCGATGAGGTGGAG CTATTTTTCCCACTAATCTGTGAACAGTTGGCGATCGCCCCCTCCTTTCCCCTACGGTTGCGGCCAGAGATGGAACAAAA GTTAGCGCGGGAACTGTGGGCCGACACCCTAGCTACCTGGGAGTTACTGCCCAATGAGCGGTTTCAGAATCGCTTGGTGC GACGACTATTGGATATTTTGCTGCTGGCGGGGGCGGCGGGCATCGCCCTAGCGGAGATTCCCCAACGGCTGATGGTGGGG CAGTTATCCTTACTGACGGGAACGGTGGCCATTGGTGCAGAGACAAACCGAGAGGAATTTACAGAAACGGCAGGAAAACT GATTCAACAGTGGCGAGATTGGTGCTTAGGACGAGGTTTTCTTACCTATGGCATTATTTACAATCTCTACGGGCAATATT TGCTCAAAAATGGACAATACCAAGCGTCCCTAGGGCAACGGTTTGGGGCAATTTTCGCCGATGATGGCCAAGATTATCCG GCGATCGCCAAGGATTTAGCGGACATTTTATTAGATCAAGGTTGCACCGGAGTCTTTACAGAAAATCCCGTTGGGAGAAT TCGCCTCGGTTTAAGCGGTGATCCTGATTATTGGAGCCAATTGGCGCAACGGTGCGAGGTGATTCACCTAGAACGACCAG CGGGCCTGGGGGCGACTCTCACAACGCAAATTCAAAAGACCGTGACCCAACCCCAGTTTGGGGGACAACTACCCGCCACC ATCCAATCCATTCAAACCGTTGCCCGCGCCCAACTGTTGACACGGGTTGGTGAACAAATTCAATTTTTAGTGAAAGATCA AGGAGTTGCGCCAGCAGACATTGCGATTATTGCGCCTGGGTTAGATGAGGTCGCCCGTTATACCCTGATGGAAAGCCTCG CCGTCGCCGAAATTTCCCTGGAACCCCTGCGGGAACAGCGGCCCATTGCCAGTTCTCCCTGGGGGCGATCGCTACTGACT TTGTTGGCGTTGATTTATCCGGGCAGTGGACGGCTGATCCAAAGCCAAGCTGTGGCGGAAATGCTCATGATGCTATCCCA GACCGCCAGCGAAAAGCCATTAATCGATCCCGTGCGGGCTGGTTTGTTGGTGGATTATTGTTTCCAGCCCGACCCGGAGC GGCCCCAACTGCTCCCAGCAACGACGATGCCTAGGGGCGATCGCCTCGGTTATCAAACCACCCAGGCCTACGAAGCAATC CGCCAGTGGATCGAACAAACCCAGGCCACTCATAATGTCACCCCCCAGGGCATTTTGCAGACCCTGAACCAGGCGATTCA AACCTTTTATCTGCAAAAACTGGCCCCCAGCTACGGCCAACTGGCGACCCTGCGGGAACTCAGCGAGACCGCCCAGCACT TTTGGCAATGTGGCGATCGCCTAGAGCGCCAAAACACAATCACTGCCCAGCTTGCCGACCTGCTGCAACTAATCCAAGCA GAAACTATTACTGCGAATCCCCGTCCCCAGTACAACTTTAACCACCAGCCCCTCAATTCCATTACCCTCGCAACCATCTT TCAATACCGCTCCGCCCGTCGTCACCACTCCTATCAGTTTTGGCTAGATGCGGGCTCACGCCTCTGGGAAAAAGGCGGTG CCGCGACCCTGTTTGGCTATGGCGTTTTTCAACGCAGTTGGCAAGGGGAGCCTTGGTCTCTGGCAATAGAACAACAAGGC GATCGCCAACGGCTCCAAAATATTATCCAAGACCTCCTTGCCCGCACTGATACCCAAATTTATCTGTGCCACAGTGATTT TGGCACCAATGGCAGTGAACAGCTTGGCCCCCTCTATCCCCTCATTCAAGCCACCCAAGAATGCCTCCAATCCTCCCTTG AAGAAGATAGACGTTAG
Upstream 100 bases:
>100_bases TCTCCGGCCTGACGGCCACCTCCCTCTAGGGAGGATTTTGGGGAGGTTTTGTGTTAGTTGGTTATTGTAATCGAAGTAGA TGGGATTGTTGGGTGGTCTG
Downstream 100 bases:
>100_bases GCCGGAGGGTACCTTCTCCCCTGCGAGGGGAGTTAGAGGGGTGTCCCTTGAGGGAGGTGGCCGCCAGGCCGGAGGGTGCC ATTCTCCCCTATGAGGGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 698; Mature: 697
Protein sequence:
>698_residues MGAIWLRGQSRSGKTTALVARLKAWVAGQDPQAVLVPGLLVLAANNQNQRLLADLIHQEIRGSYPFVSKTPVAFMADEVE LFFPLICEQLAIAPSFPLRLRPEMEQKLARELWADTLATWELLPNERFQNRLVRRLLDILLLAGAAGIALAEIPQRLMVG QLSLLTGTVAIGAETNREEFTETAGKLIQQWRDWCLGRGFLTYGIIYNLYGQYLLKNGQYQASLGQRFGAIFADDGQDYP AIAKDLADILLDQGCTGVFTENPVGRIRLGLSGDPDYWSQLAQRCEVIHLERPAGLGATLTTQIQKTVTQPQFGGQLPAT IQSIQTVARAQLLTRVGEQIQFLVKDQGVAPADIAIIAPGLDEVARYTLMESLAVAEISLEPLREQRPIASSPWGRSLLT LLALIYPGSGRLIQSQAVAEMLMMLSQTASEKPLIDPVRAGLLVDYCFQPDPERPQLLPATTMPRGDRLGYQTTQAYEAI RQWIEQTQATHNVTPQGILQTLNQAIQTFYLQKLAPSYGQLATLRELSETAQHFWQCGDRLERQNTITAQLADLLQLIQA ETITANPRPQYNFNHQPLNSITLATIFQYRSARRHHSYQFWLDAGSRLWEKGGAATLFGYGVFQRSWQGEPWSLAIEQQG DRQRLQNIIQDLLARTDTQIYLCHSDFGTNGSEQLGPLYPLIQATQECLQSSLEEDRR
Sequences:
>Translated_698_residues MGAIWLRGQSRSGKTTALVARLKAWVAGQDPQAVLVPGLLVLAANNQNQRLLADLIHQEIRGSYPFVSKTPVAFMADEVE LFFPLICEQLAIAPSFPLRLRPEMEQKLARELWADTLATWELLPNERFQNRLVRRLLDILLLAGAAGIALAEIPQRLMVG QLSLLTGTVAIGAETNREEFTETAGKLIQQWRDWCLGRGFLTYGIIYNLYGQYLLKNGQYQASLGQRFGAIFADDGQDYP AIAKDLADILLDQGCTGVFTENPVGRIRLGLSGDPDYWSQLAQRCEVIHLERPAGLGATLTTQIQKTVTQPQFGGQLPAT IQSIQTVARAQLLTRVGEQIQFLVKDQGVAPADIAIIAPGLDEVARYTLMESLAVAEISLEPLREQRPIASSPWGRSLLT LLALIYPGSGRLIQSQAVAEMLMMLSQTASEKPLIDPVRAGLLVDYCFQPDPERPQLLPATTMPRGDRLGYQTTQAYEAI RQWIEQTQATHNVTPQGILQTLNQAIQTFYLQKLAPSYGQLATLRELSETAQHFWQCGDRLERQNTITAQLADLLQLIQA ETITANPRPQYNFNHQPLNSITLATIFQYRSARRHHSYQFWLDAGSRLWEKGGAATLFGYGVFQRSWQGEPWSLAIEQQG DRQRLQNIIQDLLARTDTQIYLCHSDFGTNGSEQLGPLYPLIQATQECLQSSLEEDRR >Mature_697_residues GAIWLRGQSRSGKTTALVARLKAWVAGQDPQAVLVPGLLVLAANNQNQRLLADLIHQEIRGSYPFVSKTPVAFMADEVEL FFPLICEQLAIAPSFPLRLRPEMEQKLARELWADTLATWELLPNERFQNRLVRRLLDILLLAGAAGIALAEIPQRLMVGQ LSLLTGTVAIGAETNREEFTETAGKLIQQWRDWCLGRGFLTYGIIYNLYGQYLLKNGQYQASLGQRFGAIFADDGQDYPA IAKDLADILLDQGCTGVFTENPVGRIRLGLSGDPDYWSQLAQRCEVIHLERPAGLGATLTTQIQKTVTQPQFGGQLPATI QSIQTVARAQLLTRVGEQIQFLVKDQGVAPADIAIIAPGLDEVARYTLMESLAVAEISLEPLREQRPIASSPWGRSLLTL LALIYPGSGRLIQSQAVAEMLMMLSQTASEKPLIDPVRAGLLVDYCFQPDPERPQLLPATTMPRGDRLGYQTTQAYEAIR QWIEQTQATHNVTPQGILQTLNQAIQTFYLQKLAPSYGQLATLRELSETAQHFWQCGDRLERQNTITAQLADLLQLIQAE TITANPRPQYNFNHQPLNSITLATIFQYRSARRHHSYQFWLDAGSRLWEKGGAATLFGYGVFQRSWQGEPWSLAIEQQGD RQRLQNIIQDLLARTDTQIYLCHSDFGTNGSEQLGPLYPLIQATQECLQSSLEEDRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77974; Mature: 77843
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAIWLRGQSRSGKTTALVARLKAWVAGQDPQAVLVPGLLVLAANNQNQRLLADLIHQEI CCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEECCEEEEEECCCCHHHHHHHHHHHH RGSYPFVSKTPVAFMADEVELFFPLICEQLAIAPSFPLRLRPEMEQKLARELWADTLATW CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH ELLPNERFQNRLVRRLLDILLLAGAAGIALAEIPQRLMVGQLSLLTGTVAIGAETNREEF HHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHH TETAGKLIQQWRDWCLGRGFLTYGIIYNLYGQYLLKNGQYQASLGQRFGAIFADDGQDYP HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEECCCCCCCH AIAKDLADILLDQGCTGVFTENPVGRIRLGLSGDPDYWSQLAQRCEVIHLERPAGLGATL HHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHEEEEECCCCCCCHH TTQIQKTVTQPQFGGQLPATIQSIQTVARAQLLTRVGEQIQFLVKDQGVAPADIAIIAPG HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCC LDEVARYTLMESLAVAEISLEPLREQRPIASSPWGRSLLTLLALIYPGSGRLIQSQAVAE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEHHHHHHH MLMMLSQTASEKPLIDPVRAGLLVDYCFQPDPERPQLLPATTMPRGDRLGYQTTQAYEAI HHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH RQWIEQTQATHNVTPQGILQTLNQAIQTFYLQKLAPSYGQLATLRELSETAQHFWQCGDR HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LERQNTITAQLADLLQLIQAETITANPRPQYNFNHQPLNSITLATIFQYRSARRHHSYQF HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEE WLDAGSRLWEKGGAATLFGYGVFQRSWQGEPWSLAIEQQGDRQRLQNIIQDLLARTDTQI EEHHHHHHHHCCCCEEEHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEE YLCHSDFGTNGSEQLGPLYPLIQATQECLQSSLEEDRR EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GAIWLRGQSRSGKTTALVARLKAWVAGQDPQAVLVPGLLVLAANNQNQRLLADLIHQEI CEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEECCEEEEEECCCCHHHHHHHHHHHH RGSYPFVSKTPVAFMADEVELFFPLICEQLAIAPSFPLRLRPEMEQKLARELWADTLATW CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH ELLPNERFQNRLVRRLLDILLLAGAAGIALAEIPQRLMVGQLSLLTGTVAIGAETNREEF HHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHH TETAGKLIQQWRDWCLGRGFLTYGIIYNLYGQYLLKNGQYQASLGQRFGAIFADDGQDYP HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEECCCCCCCH AIAKDLADILLDQGCTGVFTENPVGRIRLGLSGDPDYWSQLAQRCEVIHLERPAGLGATL HHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHEEEEECCCCCCCHH TTQIQKTVTQPQFGGQLPATIQSIQTVARAQLLTRVGEQIQFLVKDQGVAPADIAIIAPG HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCC LDEVARYTLMESLAVAEISLEPLREQRPIASSPWGRSLLTLLALIYPGSGRLIQSQAVAE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEHHHHHHH MLMMLSQTASEKPLIDPVRAGLLVDYCFQPDPERPQLLPATTMPRGDRLGYQTTQAYEAI HHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH RQWIEQTQATHNVTPQGILQTLNQAIQTFYLQKLAPSYGQLATLRELSETAQHFWQCGDR HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LERQNTITAQLADLLQLIQAETITANPRPQYNFNHQPLNSITLATIFQYRSARRHHSYQF HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEE WLDAGSRLWEKGGAATLFGYGVFQRSWQGEPWSLAIEQQGDRQRLQNIIQDLLARTDTQI EEHHHHHHHHCCCCEEEHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEE YLCHSDFGTNGSEQLGPLYPLIQATQECLQSSLEEDRR EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA