| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is ysgA [C]
Identifier: 170079354
GI number: 170079354
Start: 2885395
End: 2886132
Strand: Reverse
Name: ysgA [C]
Synonym: SYNPCC7002_A2763
Alternate gene names: 170079354
Gene position: 2886132-2885395 (Counterclockwise)
Preceding gene: 170079355
Following gene: 170079353
Centisome position: 95.95
GC content: 51.9
Gene sequence:
>738_bases ATGTCTCCACTCCAAACAGAAACGGTTCAAATTCCCAATGGCGATCTGCAGATTGCGGCTTACTTGAGCTATCCAGTTAG TGCGGAACCCTTGCCCGCTGTGATTGTGGTGCAGGAAATTTTTGGGGTTAATGGCCACATTCGTGATGTCACTGACCGCA TTGCCCGCTTGGGTTATGTGGCGATCGCCCCGGCAATTTATCAACGGTTGGCCCCAGGATTTGAAACAGGGTACACTCCA GAAGACGTGAAAGTCGGACGGCAATACAAAGAACAGACTAAGGCCACAGAACTGCTTAGTGATCTCCAGGCAACCATTGA TTATCTTTACGGTCGTCCCCAGGTGAAGCCCACGGGAGTCGGTAGCATTGGGTTTTGCTTTGGCGGCCACGTGACCTATC TGGGAGCGACTCTGCCGGAGATTAAGGCAACAGCGTCTTTTTATGGTGCTGGGATTACCACCTGGTGTCCCGGGGAAGCA ACCCAGACAACCCTGGACTATACCTCTGAAATCCAAGGCAAACTCTACGGTTTCTTTGGGATGGCCGATGCGTCGATTCC GGCGGCTCAAGTAGATCAGATCGAGACGGCTTTAAAAACGCACCAAGTTGAGCACAAGATTTTTCGCTATGAAGGGGCAG GCCATGGCTTCTTTTGCGATCGCCGTGCCAGTTACAATGAACAGGCCGCCCAAGCAGCATGGCAAGAGGTACAGACTCTC TTTGCTGAAACCCTCTAA
Upstream 100 bases:
>100_bases GGAGTCTTTCCCTCTTTTTTTGTGGCCATGGGCAAAGCAATCTCGCAGGGAACACCTTCTAAAATGGGAACAATGAAGTT ATTTATCCAGTGTTTTTGTG
Downstream 100 bases:
>100_bases ATTTTTTATTTTTGTCTAACTCCGATGACCCAGATGCCGACCGACGACCCCACAATTCAGCTTGATCAATTTCTGAAAAT TATGAACCTTGTGGCGACGG
Product: dienelactone hydrolase family protein
Products: NA
Alternate protein names: Dienelactone hydrolase; DLH [H]
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MSPLQTETVQIPNGDLQIAAYLSYPVSAEPLPAVIVVQEIFGVNGHIRDVTDRIARLGYVAIAPAIYQRLAPGFETGYTP EDVKVGRQYKEQTKATELLSDLQATIDYLYGRPQVKPTGVGSIGFCFGGHVTYLGATLPEIKATASFYGAGITTWCPGEA TQTTLDYTSEIQGKLYGFFGMADASIPAAQVDQIETALKTHQVEHKIFRYEGAGHGFFCDRRASYNEQAAQAAWQEVQTL FAETL
Sequences:
>Translated_245_residues MSPLQTETVQIPNGDLQIAAYLSYPVSAEPLPAVIVVQEIFGVNGHIRDVTDRIARLGYVAIAPAIYQRLAPGFETGYTP EDVKVGRQYKEQTKATELLSDLQATIDYLYGRPQVKPTGVGSIGFCFGGHVTYLGATLPEIKATASFYGAGITTWCPGEA TQTTLDYTSEIQGKLYGFFGMADASIPAAQVDQIETALKTHQVEHKIFRYEGAGHGFFCDRRASYNEQAAQAAWQEVQTL FAETL >Mature_244_residues SPLQTETVQIPNGDLQIAAYLSYPVSAEPLPAVIVVQEIFGVNGHIRDVTDRIARLGYVAIAPAIYQRLAPGFETGYTPE DVKVGRQYKEQTKATELLSDLQATIDYLYGRPQVKPTGVGSIGFCFGGHVTYLGATLPEIKATASFYGAGITTWCPGEAT QTTLDYTSEIQGKLYGFFGMADASIPAAQVDQIETALKTHQVEHKIFRYEGAGHGFFCDRRASYNEQAAQAAWQEVQTLF AETL
Specific function: Unknown
COG id: COG0412
COG function: function code Q; Dienelactone hydrolase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dienelactone hydrolase family [H]
Homologues:
Organism=Escherichia coli, GI48994982, Length=257, Percent_Identity=31.1284046692607, Blast_Score=117, Evalue=7e-28, Organism=Saccharomyces cerevisiae, GI6320117, Length=194, Percent_Identity=27.8350515463918, Blast_Score=80, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002925 [H]
Pfam domain/function: PF01738 DLH [H]
EC number: =3.1.1.45 [H]
Molecular weight: Translated: 26741; Mature: 26610
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPLQTETVQIPNGDLQIAAYLSYPVSAEPLPAVIVVQEIFGVNGHIRDVTDRIARLGYV CCCCCCCEEECCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH AIAPAIYQRLAPGFETGYTPEDVKVGRQYKEQTKATELLSDLQATIDYLYGRPQVKPTGV HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GSIGFCFGGHVTYLGATLPEIKATASFYGAGITTWCPGEATQTTLDYTSEIQGKLYGFFG CCCHHHHCCHHHHHCCCCHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHEEEEE MADASIPAAQVDQIETALKTHQVEHKIFRYEGAGHGFFCDRRASYNEQAAQAAWQEVQTL CCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEECCCCCCCHHHHHHHHHHHHHH FAETL HHHCC >Mature Secondary Structure SPLQTETVQIPNGDLQIAAYLSYPVSAEPLPAVIVVQEIFGVNGHIRDVTDRIARLGYV CCCCCCEEECCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH AIAPAIYQRLAPGFETGYTPEDVKVGRQYKEQTKATELLSDLQATIDYLYGRPQVKPTGV HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GSIGFCFGGHVTYLGATLPEIKATASFYGAGITTWCPGEATQTTLDYTSEIQGKLYGFFG CCCHHHHCCHHHHHCCCCHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHEEEEE MADASIPAAQVDQIETALKTHQVEHKIFRYEGAGHGFFCDRRASYNEQAAQAAWQEVQTL CCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEECCCCCCCHHHHHHHHHHHHHH FAETL HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]