| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079317
Identifier: 170079317
GI number: 170079317
Start: 2851491
End: 2851616
Strand: Reverse
Name: 170079317
Synonym: SYNPCC7002_A2725
Alternate gene names: NA
Gene position: 2851616-2851491 (Counterclockwise)
Preceding gene: 170079318
Following gene: 170079316
Centisome position: 94.8
GC content: 41.27
Gene sequence:
>126_bases TTGTCCCTCTTTTTTTTAGGCAATTTTCAACCAAAGGCGATCGCCCCCGGTGATCCAAAAGAATCTTCTACAATGGGGAG CGGCCGTTATTCTCAAATTGTGTTTAGAAAGTTTTATGGTAGTTGA
Upstream 100 bases:
>100_bases CCATTTGGCGCATCCACGAAGAAAGTTCTGTGAGCAGTATGTTTCGGTAAATTTTGGCTTGGCTAGAACAATCAATTGAT TTTGGGGAGGGAAAGATCAT
Downstream 100 bases:
>100_bases GCAAATCCTGGATCTCGCCAAACAGAAGGGTATCGAAGCGGAGGTGTACTACCGCAGTAGCCGTGATACTCCCATCGACT TTGAGAATAATCGCCTCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 41; Mature: 40
Protein sequence:
>41_residues MSLFFLGNFQPKAIAPGDPKESSTMGSGRYSQIVFRKFYGS
Sequences:
>Translated_41_residues MSLFFLGNFQPKAIAPGDPKESSTMGSGRYSQIVFRKFYGS >Mature_40_residues SLFFLGNFQPKAIAPGDPKESSTMGSGRYSQIVFRKFYGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4548; Mature: 4417
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLFFLGNFQPKAIAPGDPKESSTMGSGRYSQIVFRKFYGS CEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure SLFFLGNFQPKAIAPGDPKESSTMGSGRYSQIVFRKFYGS EEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA