| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079315
Identifier: 170079315
GI number: 170079315
Start: 2850204
End: 2850530
Strand: Reverse
Name: 170079315
Synonym: SYNPCC7002_A2723
Alternate gene names: NA
Gene position: 2850530-2850204 (Counterclockwise)
Preceding gene: 170079316
Following gene: 170079314
Centisome position: 94.76
GC content: 50.76
Gene sequence:
>327_bases ATGGTGAATTTCTGCATGGGGGCCGGGAAAACCCCGTTAACGGAGCTGATCAAGGGCATGAAGGAAGGCGTGATCGTTGA TCAAGTGTTAGGAGCGGGTCAGTCTAATCAGCTAGCTGGAGAATTTTCCGTGAACCTCGACCTCGGTTACAAAGTCGAAA ACGGCGAAATTGTCGGTCGTCTGAAAAATACCATGGTGGCGGGCAGCATCTTCGAGGCCTTTGCAGATTTAGTTGATTTT AGTGACACCTGCGAATGGGTTGGTGGTAGTGCTTATATGCCAGCGATTCTGTTCGGCAAGTTGGGGGTTGCGTCCAGGGC GGTTTAA
Upstream 100 bases:
>100_bases TGTCCAGCAATTCTATTGGGATCGCCAGTGGGCCGCCCGGGGCAACGCCGAGGCCCAGGGGAACGGTTTCCGGGGCGGTC TTTCTCGTCCCAGTCCCGAC
Downstream 100 bases:
>100_bases AATTGCCATACTTGCCCCTGCATTGTGAGCGATGATGCCTGTGAAATCTGTGATCCGATTGCTGAGTCTCTGTTGTGTGT GTGTCCTCTGCCTGGCGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: PmbA Protein; TldD/PmbA Family; Modulator Of DNA Gyrase PmbA-Like Protein; PmbA/TldD Family Protein; Modulator Of DNA Gyrase; DNA Gyrase Modulator Peptidase U
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MVNFCMGAGKTPLTELIKGMKEGVIVDQVLGAGQSNQLAGEFSVNLDLGYKVENGEIVGRLKNTMVAGSIFEAFADLVDF SDTCEWVGGSAYMPAILFGKLGVASRAV
Sequences:
>Translated_108_residues MVNFCMGAGKTPLTELIKGMKEGVIVDQVLGAGQSNQLAGEFSVNLDLGYKVENGEIVGRLKNTMVAGSIFEAFADLVDF SDTCEWVGGSAYMPAILFGKLGVASRAV >Mature_108_residues MVNFCMGAGKTPLTELIKGMKEGVIVDQVLGAGQSNQLAGEFSVNLDLGYKVENGEIVGRLKNTMVAGSIFEAFADLVDF SDTCEWVGGSAYMPAILFGKLGVASRAV
Specific function: Unknown
COG id: COG0312
COG function: function code R; Predicted Zn-dependent proteases and their inactivated homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11366; Mature: 11366
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNFCMGAGKTPLTELIKGMKEGVIVDQVLGAGQSNQLAGEFSVNLDLGYKVENGEIVGR CCCCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCEEEEEEEEECEEECCCCEEHH LKNTMVAGSIFEAFADLVDFSDTCEWVGGSAYMPAILFGKLGVASRAV HHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure MVNFCMGAGKTPLTELIKGMKEGVIVDQVLGAGQSNQLAGEFSVNLDLGYKVENGEIVGR CCCCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCEEEEEEEEECEEECCCCEEHH LKNTMVAGSIFEAFADLVDFSDTCEWVGGSAYMPAILFGKLGVASRAV HHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA