| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079314
Identifier: 170079314
GI number: 170079314
Start: 2849435
End: 2850172
Strand: Reverse
Name: 170079314
Synonym: SYNPCC7002_A2722
Alternate gene names: NA
Gene position: 2850172-2849435 (Counterclockwise)
Preceding gene: 170079315
Following gene: 170079313
Centisome position: 94.75
GC content: 51.49
Gene sequence:
>738_bases ATGATGCCTGTGAAATCTGTGATCCGATTGCTGAGTCTCTGTTGTGTGTGTGTCCTCTGCCTGGCGGGTTGTGTGGACTA TGATGTGGAGATCGCCTTCGACCACCAGCACCATGGCGAAATTCACCAGCATCTCCAGTTGGGGGATGAGTTTACGAACT TTAATCAGCAAGAAGCAAAGCACTGGCTCAAAAGTGTGGAAAAACGCGCCAGGGGGCTCCATGGTTCTACCCAGCGGCTC TCGACCCAGGAGTTGGATGTACGAATTCCCTTCCACAATGGGGCAGATTTAGTAGAAAAGTTCAATGACTTTTTTAACCC GGAAGGACAAAATCTCCAGGCGACAGATTTAGATTTGGTACAACTCAAATCGGCGATCGCCCTTGAACAAAAGAACTGGC TTTTGTTTGAACGTAACCGAGCCACTTTGGACGTAGATTTGCGGGCCTTGGGCGTTTTGTCCCAGCGGGGCAGTTTGATC CTCAGTCCCGGTTCCCTCCTGGATTTAGACGTCAGCCTAAAAACGCCTTTGGGAGCACGGGTGATTAATCGCAACACAAC GGCGGCGCCCGTCACCCGCAAGGAAGGCGATCGCCTAATTTGGACATTACAACCGGGGCAGCTCAATCATCTGGAAGTGG CCTTTTGGGTGCCCAGTTGGGTGGGCCTTGGCTCCGGGGGCTTAATCGCATTGTTATTCCTGGGTTATTACCTAAAATAT CGCCGTTTGCCAGTGTAG
Upstream 100 bases:
>100_bases GTTGGTGGTAGTGCTTATATGCCAGCGATTCTGTTCGGCAAGTTGGGGGTTGCGTCCAGGGCGGTTTAAAATTGCCATAC TTGCCCCTGCATTGTGAGCG
Downstream 100 bases:
>100_bases TTGCTGATCTATCGCTATTGTTAAATCAATTGCCCTTATCTTTTGCGTCCTATGGTTGCCACCCAAGCCGAACCCTTGAT TGAATTGCGGGGAATTTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MMPVKSVIRLLSLCCVCVLCLAGCVDYDVEIAFDHQHHGEIHQHLQLGDEFTNFNQQEAKHWLKSVEKRARGLHGSTQRL STQELDVRIPFHNGADLVEKFNDFFNPEGQNLQATDLDLVQLKSAIALEQKNWLLFERNRATLDVDLRALGVLSQRGSLI LSPGSLLDLDVSLKTPLGARVINRNTTAAPVTRKEGDRLIWTLQPGQLNHLEVAFWVPSWVGLGSGGLIALLFLGYYLKY RRLPV
Sequences:
>Translated_245_residues MMPVKSVIRLLSLCCVCVLCLAGCVDYDVEIAFDHQHHGEIHQHLQLGDEFTNFNQQEAKHWLKSVEKRARGLHGSTQRL STQELDVRIPFHNGADLVEKFNDFFNPEGQNLQATDLDLVQLKSAIALEQKNWLLFERNRATLDVDLRALGVLSQRGSLI LSPGSLLDLDVSLKTPLGARVINRNTTAAPVTRKEGDRLIWTLQPGQLNHLEVAFWVPSWVGLGSGGLIALLFLGYYLKY RRLPV >Mature_245_residues MMPVKSVIRLLSLCCVCVLCLAGCVDYDVEIAFDHQHHGEIHQHLQLGDEFTNFNQQEAKHWLKSVEKRARGLHGSTQRL STQELDVRIPFHNGADLVEKFNDFFNPEGQNLQATDLDLVQLKSAIALEQKNWLLFERNRATLDVDLRALGVLSQRGSLI LSPGSLLDLDVSLKTPLGARVINRNTTAAPVTRKEGDRLIWTLQPGQLNHLEVAFWVPSWVGLGSGGLIALLFLGYYLKY RRLPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27572; Mature: 27572
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPVKSVIRLLSLCCVCVLCLAGCVDYDVEIAFDHQHHGEIHQHLQLGDEFTNFNQQEAK CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCHHHCCCCHHHHH HWLKSVEKRARGLHGSTQRLSTQELDVRIPFHNGADLVEKFNDFFNPEGQNLQATDLDLV HHHHHHHHHHHCCCCCHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCHHHH QLKSAIALEQKNWLLFERNRATLDVDLRALGVLSQRGSLILSPGSLLDLDVSLKTPLGAR HHHHHHHHCCCCEEEEECCCCEEEEHHHHHHHHHCCCCEEECCCCEEEEEEEECCCCCCE VINRNTTAAPVTRKEGDRLIWTLQPGQLNHLEVAFWVPSWVGLGSGGLIALLFLGYYLKY EECCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCHHHCCCCCHHHHHHHHHHHHHH RRLPV HCCCC >Mature Secondary Structure MMPVKSVIRLLSLCCVCVLCLAGCVDYDVEIAFDHQHHGEIHQHLQLGDEFTNFNQQEAK CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCHHHCCCCHHHHH HWLKSVEKRARGLHGSTQRLSTQELDVRIPFHNGADLVEKFNDFFNPEGQNLQATDLDLV HHHHHHHHHHHCCCCCHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCHHHH QLKSAIALEQKNWLLFERNRATLDVDLRALGVLSQRGSLILSPGSLLDLDVSLKTPLGAR HHHHHHHHCCCCEEEEECCCCEEEEHHHHHHHHHCCCCEEECCCCEEEEEEEECCCCCCE VINRNTTAAPVTRKEGDRLIWTLQPGQLNHLEVAFWVPSWVGLGSGGLIALLFLGYYLKY EECCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCHHHCCCCCHHHHHHHHHHHHHH RRLPV HCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA