| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is yhhW [C]
Identifier: 170079310
GI number: 170079310
Start: 2845290
End: 2845991
Strand: Reverse
Name: yhhW [C]
Synonym: SYNPCC7002_A2717
Alternate gene names: 170079310
Gene position: 2845991-2845290 (Counterclockwise)
Preceding gene: 170079312
Following gene: 170079308
Centisome position: 94.61
GC content: 50.0
Gene sequence:
>702_bases ATGATTCAACTCCGTCCCTCTGCTGAAAGGGGTCGTGGCAAACTAGATTGGCTAGAGAGCTACTTTAGTTTTTCGTTTTC CCAGTACTACGATCCGGCCCACATGAATTTTTCTAACCTGCGGGTGATCAATGAAGATTACATTGCCCCAGGCAAAGGAT TCGCCACCCATGGCCACCGCGATATGGAGATTGTCACCTATGTCCTCGAAGGGGAATTGGCCCACAAAGACAACATTGGC AATGGTTCGATTATTCGCCCTGGGGATGTGCAACGCATGAGCGCAGGTACTGGCATTTTGCACAGCGAATTTAATCCCTC GTCAGAACAGCCTGTGCATTTATTGCAGATTTGGATTACCCCCGATCAACTGGGTGTAGAACCAAGCTACGAGCAGACCT ATTTCGCCCCGGAAGAAAAAGAAAATCAGTTACGGATTGTTGCTTCCCCCGATGGCCGCGATCGCTCTGTAAAAATTCAC CAGAATGCTTCGATTTACGCGGCACTGCTCTCTACCGGAGCCACGGTTACCCATCCATTAGCGGCGGGCCGTCGTGCTTG GCTACAAATTGTCAAAGGAAGCCTCACGGTTAATGGCGTTAGGATGGAAGCGGGCGATGGCGCTGGCATTAGTGGTGAAA CAGAACTGATTTTTGCAGGTCAAGGGGCCGAGACGGAATTTTTATTGTTTGATTTGCCCTAG
Upstream 100 bases:
>100_bases ATACATTTTGCATATAAAATAGCTTATTGTCTTTTATTTGGCGGCAATCTAAAATAGAAGCAATCACCTAAACCCGCTAA AAAACGCCTCGGAGGTTTTT
Downstream 100 bases:
>100_bases GTCAGCCGAGTTTGTTGCTCACAGTTTATAGAGGAAAAATGAATATGGCTAAACCAACGATTGCAGCCAAAAAGCCCATG ACGCTGGAACTTGAGGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein sll1773 [H]
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MIQLRPSAERGRGKLDWLESYFSFSFSQYYDPAHMNFSNLRVINEDYIAPGKGFATHGHRDMEIVTYVLEGELAHKDNIG NGSIIRPGDVQRMSAGTGILHSEFNPSSEQPVHLLQIWITPDQLGVEPSYEQTYFAPEEKENQLRIVASPDGRDRSVKIH QNASIYAALLSTGATVTHPLAAGRRAWLQIVKGSLTVNGVRMEAGDGAGISGETELIFAGQGAETEFLLFDLP
Sequences:
>Translated_233_residues MIQLRPSAERGRGKLDWLESYFSFSFSQYYDPAHMNFSNLRVINEDYIAPGKGFATHGHRDMEIVTYVLEGELAHKDNIG NGSIIRPGDVQRMSAGTGILHSEFNPSSEQPVHLLQIWITPDQLGVEPSYEQTYFAPEEKENQLRIVASPDGRDRSVKIH QNASIYAALLSTGATVTHPLAAGRRAWLQIVKGSLTVNGVRMEAGDGAGISGETELIFAGQGAETEFLLFDLP >Mature_233_residues MIQLRPSAERGRGKLDWLESYFSFSFSQYYDPAHMNFSNLRVINEDYIAPGKGFATHGHRDMEIVTYVLEGELAHKDNIG NGSIIRPGDVQRMSAGTGILHSEFNPSSEQPVHLLQIWITPDQLGVEPSYEQTYFAPEEKENQLRIVASPDGRDRSVKIH QNASIYAALLSTGATVTHPLAAGRRAWLQIVKGSLTVNGVRMEAGDGAGISGETELIFAGQGAETEFLLFDLP
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=156, Percent_Identity=33.3333333333333, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI4505823, Length=156, Percent_Identity=33.3333333333333, Blast_Score=77, Evalue=1e-14, Organism=Escherichia coli, GI1789847, Length=233, Percent_Identity=48.9270386266094, Blast_Score=230, Evalue=5e-62, Organism=Escherichia coli, GI1789493, Length=238, Percent_Identity=26.890756302521, Blast_Score=107, Evalue=8e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 25704; Mature: 25704
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQLRPSAERGRGKLDWLESYFSFSFSQYYDPAHMNFSNLRVINEDYIAPGKGFATHGHR CEEECCCHHHCCCCHHHHHHHHHCHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC DMEIVTYVLEGELAHKDNIGNGSIIRPGDVQRMSAGTGILHSEFNPSSEQPVHLLQIWIT CEEEEEEEECCCCCCCCCCCCCCEECCCCCEEECCCCCEEECCCCCCCCCCEEEEEEEEC PDQLGVEPSYEQTYFAPEEKENQLRIVASPDGRDRSVKIHQNASIYAALLSTGATVTHPL HHHHCCCCCCCCEEECCCCCCCCEEEEECCCCCCCEEEEECCCEEEEEEHHCCCEEECHH AAGRRAWLQIVKGSLTVNGVRMEAGDGAGISGETELIFAGQGAETEFLLFDLP HHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCEEEEEEECC >Mature Secondary Structure MIQLRPSAERGRGKLDWLESYFSFSFSQYYDPAHMNFSNLRVINEDYIAPGKGFATHGHR CEEECCCHHHCCCCHHHHHHHHHCHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC DMEIVTYVLEGELAHKDNIGNGSIIRPGDVQRMSAGTGILHSEFNPSSEQPVHLLQIWIT CEEEEEEEECCCCCCCCCCCCCCEECCCCCEEECCCCCEEECCCCCCCCCCEEEEEEEEC PDQLGVEPSYEQTYFAPEEKENQLRIVASPDGRDRSVKIHQNASIYAALLSTGATVTHPL HHHHCCCCCCCCEEECCCCCCCCEEEEECCCCCCCEEEEECCCEEEEEEHHCCCEEECHH AAGRRAWLQIVKGSLTVNGVRMEAGDGAGISGETELIFAGQGAETEFLLFDLP HHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]