| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079312
Identifier: 170079312
GI number: 170079312
Start: 2847278
End: 2848531
Strand: Reverse
Name: 170079312
Synonym: SYNPCC7002_A2720
Alternate gene names: NA
Gene position: 2848531-2847278 (Counterclockwise)
Preceding gene: 170079313
Following gene: 170079310
Centisome position: 94.7
GC content: 50.64
Gene sequence:
>1254_bases ATGCGATCGCGTACCCTCAAAGAAGGCTCCCTCGGTTTATTTATTTTCGCTGGACTCTCCCTGCTCGGCGTCGTGCTCAT CTGGCTGACAGGGGCAACCCTGGGGAAACGCACTTATTCGATTAATGTCCGCTTTGACAATGCCAATGCGATGCAAGAGG GGGCGATCGTCCGCTACCGGGGCCTGGAGGTGGGGCGCATCATTGACGTACAACCTTCTAGCAATGGCGTTGAGATCCAA ATTCAAATCCAAACCCCCGATCTGATCATGCCGCGAGAGGTCGTGGTCGAGGCCAACCAAGGGGGACTTATCGGAGAAAC CTCCCTCGAAATTATTCCCCAAACAGAATTAACCCAAGCAGAAATGGCCCAGAGTCCCTTCGCAGCGGACTGCCCGGAAA AAGGAGCAATTCTCTGTGATGGTACAACCCTAGAGGGGGTGATCGGGGTGAGCTTCGAGCAGGTGCTCCGCAACACCACT AAATTTAGTGAACTGTATGGTGATCCAGAGTTCTTTGAAATTGTGCGTACCTTGGCAGACAATTCCAGTGATGCGGCGGC CCAGGTGGCGATCCTTACCGAAGAATTAGCGCTGTTATCTCAGGAAGTGCGGGGGGAAGTGGATAATTTTGCCGAGAATG CCCAAGCCATTAGTGATGCGGCAGTGACCAGTTCCAATCAACTCAACCGCACCCTCGAACAGGTGAATACGCTAACAGGG AATTTTAATAGCCTTGTGGTCGAAAATCGCCAGGCCCTGGTGGGTACCCTCAATAGCATTGGGCGCACCAGTGATCAAAT GCAGCGTACTTTGGCTTCCTTTGATACAACCCTCGATACGGTCAATCAAAATCTCAGTGCAGCAAATACCGAGGAAATTT TGGATAATCTCACGGTGCTAACGGCCAACGCGGCAACGGCTTCGGAAAATCTCAAGGATGTCTCAACGGCTCTGAACGAT CCAACCAATGTGTTGATGTTGCAAAAAACCCTTGATGCAGCCCGGGTCACCTTTGAAAATACTCAAAAAATCACCTCAGA CCTGGATGAGCTAACCGGAGATCCGCAGTTTCGGAAAAATCTCATTGATTTGGTGAATGGTCTCAGTCAGTTGGTTTCCT CGACGGATCAACTGCAACAACAGATTCAGGTGGCTAATCGCATTGAGCAACAGCGCCCCATTTATAACCAGCAACGACAA ATCTCGTTACGCTCCAAGTCCCAAAACCCAGACCAAGGTCAGTCCAGAAATTAA
Upstream 100 bases:
>100_bases TTTTGACGCGGCGGTGGAAGGCCCCATTAAAGTTATCGGCTAAAATTCATCCTCCCCCATACAATAAAACGTAAATTTAT CCCCCCTACTGACGAATCCA
Downstream 100 bases:
>100_bases CCAGACAGAAATCGGCTGGAGACTTTCGGCAAAGATAAGAACCATTTTCAGAGATTGGATAATTTTTTTCTCAAAAACTC TTGGCGATCGCCAAATGAGT
Product: hypothetical protein
Products: oxaloacetate; NH3; H2O2
Alternate protein names: ABC Transporter; Mammalian Cell Entry Related Domain Protein; Mammalian Cell Entry Related Domain-Containing Protein; ABC-Type Transport System Periplasmic Component; Methyl-Accepting Chemotaxis Sensory Transducer
Number of amino acids: Translated: 417; Mature: 417
Protein sequence:
>417_residues MRSRTLKEGSLGLFIFAGLSLLGVVLIWLTGATLGKRTYSINVRFDNANAMQEGAIVRYRGLEVGRIIDVQPSSNGVEIQ IQIQTPDLIMPREVVVEANQGGLIGETSLEIIPQTELTQAEMAQSPFAADCPEKGAILCDGTTLEGVIGVSFEQVLRNTT KFSELYGDPEFFEIVRTLADNSSDAAAQVAILTEELALLSQEVRGEVDNFAENAQAISDAAVTSSNQLNRTLEQVNTLTG NFNSLVVENRQALVGTLNSIGRTSDQMQRTLASFDTTLDTVNQNLSAANTEEILDNLTVLTANAATASENLKDVSTALND PTNVLMLQKTLDAARVTFENTQKITSDLDELTGDPQFRKNLIDLVNGLSQLVSSTDQLQQQIQVANRIEQQRPIYNQQRQ ISLRSKSQNPDQGQSRN
Sequences:
>Translated_417_residues MRSRTLKEGSLGLFIFAGLSLLGVVLIWLTGATLGKRTYSINVRFDNANAMQEGAIVRYRGLEVGRIIDVQPSSNGVEIQ IQIQTPDLIMPREVVVEANQGGLIGETSLEIIPQTELTQAEMAQSPFAADCPEKGAILCDGTTLEGVIGVSFEQVLRNTT KFSELYGDPEFFEIVRTLADNSSDAAAQVAILTEELALLSQEVRGEVDNFAENAQAISDAAVTSSNQLNRTLEQVNTLTG NFNSLVVENRQALVGTLNSIGRTSDQMQRTLASFDTTLDTVNQNLSAANTEEILDNLTVLTANAATASENLKDVSTALND PTNVLMLQKTLDAARVTFENTQKITSDLDELTGDPQFRKNLIDLVNGLSQLVSSTDQLQQQIQVANRIEQQRPIYNQQRQ ISLRSKSQNPDQGQSRN >Mature_417_residues MRSRTLKEGSLGLFIFAGLSLLGVVLIWLTGATLGKRTYSINVRFDNANAMQEGAIVRYRGLEVGRIIDVQPSSNGVEIQ IQIQTPDLIMPREVVVEANQGGLIGETSLEIIPQTELTQAEMAQSPFAADCPEKGAILCDGTTLEGVIGVSFEQVLRNTT KFSELYGDPEFFEIVRTLADNSSDAAAQVAILTEELALLSQEVRGEVDNFAENAQAISDAAVTSSNQLNRTLEQVNTLTG NFNSLVVENRQALVGTLNSIGRTSDQMQRTLASFDTTLDTVNQNLSAANTEEILDNLTVLTANAATASENLKDVSTALND PTNVLMLQKTLDAARVTFENTQKITSDLDELTGDPQFRKNLIDLVNGLSQLVSSTDQLQQQIQVANRIEQQRPIYNQQRQ ISLRSKSQNPDQGQSRN
Specific function: Unknown
COG id: COG1463
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.4.3.16
Molecular weight: Translated: 45494; Mature: 45494
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSRTLKEGSLGLFIFAGLSLLGVVLIWLTGATLGKRTYSINVRFDNANAMQEGAIVRYR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHCCCEEEEE GLEVGRIIDVQPSSNGVEIQIQIQTPDLIMPREVVVEANQGGLIGETSLEIIPQTELTQA CCCCCEEEEECCCCCCEEEEEEEECCCCCCCHHHEEECCCCCEECCCCCEEECCCHHHHH EMAQSPFAADCPEKGAILCDGTTLEGVIGVSFEQVLRNTTKFSELYGDPEFFEIVRTLAD HHHCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHC NSSDAAAQVAILTEELALLSQEVRGEVDNFAENAQAISDAAVTSSNQLNRTLEQVNTLTG CCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC NFNSLVVENRQALVGTLNSIGRTSDQMQRTLASFDTTLDTVNQNLSAANTEEILDNLTVL CCHHEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCEEE TANAATASENLKDVSTALNDPTNVLMLQKTLDAARVTFENTQKITSDLDELTGDPQFRKN EECCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LIDLVNGLSQLVSSTDQLQQQIQVANRIEQQRPIYNQQRQISLRSKSQNPDQGQSRN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEECCCCCCCCCCCCCC >Mature Secondary Structure MRSRTLKEGSLGLFIFAGLSLLGVVLIWLTGATLGKRTYSINVRFDNANAMQEGAIVRYR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHCCCEEEEE GLEVGRIIDVQPSSNGVEIQIQIQTPDLIMPREVVVEANQGGLIGETSLEIIPQTELTQA CCCCCEEEEECCCCCCEEEEEEEECCCCCCCHHHEEECCCCCEECCCCCEEECCCHHHHH EMAQSPFAADCPEKGAILCDGTTLEGVIGVSFEQVLRNTTKFSELYGDPEFFEIVRTLAD HHHCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHC NSSDAAAQVAILTEELALLSQEVRGEVDNFAENAQAISDAAVTSSNQLNRTLEQVNTLTG CCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC NFNSLVVENRQALVGTLNSIGRTSDQMQRTLASFDTTLDTVNQNLSAANTEEILDNLTVL CCHHEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCEEE TANAATASENLKDVSTALNDPTNVLMLQKTLDAARVTFENTQKITSDLDELTGDPQFRKN EECCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LIDLVNGLSQLVSSTDQLQQQIQVANRIEQQRPIYNQQRQISLRSKSQNPDQGQSRN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate; H2O; O2
Specific reaction: L-aspartate + H2O + O2 = oxaloacetate + NH3 + H2O2
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA