| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is prpC [H]
Identifier: 170079294
GI number: 170079294
Start: 2830181
End: 2832169
Strand: Reverse
Name: prpC [H]
Synonym: SYNPCC7002_A2701
Alternate gene names: 170079294
Gene position: 2832169-2830181 (Counterclockwise)
Preceding gene: 170079295
Following gene: 170079293
Centisome position: 94.15
GC content: 51.94
Gene sequence:
>1989_bases ATGGTTGTTTGTCCCCAATGTACCCAAGAAAACCCACCAGAAAATCGTTTCTGTCAGTATTGTGGAAGCTCTCTGACGAG GCCCTGTCCCCACTGTGAAACGCCCGTACGGTTACAGCAAGAGCAATGTGAATCTTGCCAAGGGTGGGTCAGTCGGCCTC TCACAGCCTTGATCCTGGACGCTGAAGCGGCATCTTGCCAAGCACGAGAAACCCTTGATGAAGCGGGTCGTTATCGCCTG GGCGATCGCCCAACGGTACGGGCCGAAACATTTCCTTGGCTCACGGTGATCGATACAGCCCCAGAAACCCCAACAATTTT AGAAACTGCCCTCCAAGAGCTAGAAATAACCGATCCCACCCAGCTCGCTGATCCCGACCTCTGGCAAGATAAAGAAATTC CGGCGATCGCCCGTCAGTATCTCAGCCTGCAAGATAATTTTTCTGCGGTGCCAAAACTCCAGGAAGCTTGGCGTCAACCA GAATATCAAGTGCTGCTGTTTGAGCAACGCCCACAGCCCCTCACGCCCTTAAAAACCTACTGCCAAGCACAAACCCCCCT CTACGAACAACTGCTGCAATGGTGTTTTCAGATGGTGCAGCTATGGCGAGAATTGGTGCCCCTCCAATGTTGCCAAACTA TCCTTGAACCAATAAATTTATACCTCGACGAAGACCAAAGCCTCGTGGTGCGACAACTCCTCCAGGATGATCCAGACCAT CTCCCGGCACTGCAGCGACTGCCTCAACTATGGCAAGATTTGTTTCACCTATCTGCACAACCAGAGTGGCAACCCCTCTA TGAGCTGACTGAAACGGCCCAAATTGGTGGTTTAGATACCGTCTCCCGCCTAAAAAAAGCCCTCCGTGCCCTCGCCCCAG AAAATACCGATGATTTTTATGGGGAAGTGGAGGGAGAGTTAGAAGCCATCGAATTACAGCCAGAGGATTTAACCACCCTG GATGATGTGTTGTTGTCGGCTGATTTAGGCCCAGAAGATCTCGCAGAAACCCCGGACGGAGAGACAGCAACGGCCAATTC TGGATCAGAAACAGAAGACTCACCCCAGATTGAACATTCTGGAGGGAGCATCGCCTCGGGGGACTTTGAACCCTTGGATT TCCCAGAAGAAGAGGAAGCCTCAACGGTGGTCTTACCGATGAATTTGGTGAGTTTAGACGATGCGGGCTGCACGGATATT GGTCAAGAGCGGGATCACAACGAGGATTATTTTGGTATGCGTACCCGCATCGAAAAGCAGGAAAATCTCCTGGGTAGACA AATTCAAGGGCGCGGCTTTTATGTGGTCTGTGATGGTATGGGCGGCCATGCGGCGGGGGAAGTGGCCAGTGCCCTTTCTG TGGAAACGATTCAAGCTTTTTTCCAAGAGCATTGGCAGGACGAGTTACCGGATGAGGCCGTGATGCGCCAGGCCATTTGG GAGACCAATGAGGCGGTTTACAATATCAACCTGAAAAATTCCCGTTCTGGGAGCGGGCGCATGGGCACCACCTTAGTTTT GATGTTGGTTCAAGACAATCAGGTGGCGATCGCCCATGTGGGAGACAGTCGCATCTATCGTGTGAGCCGCAAAGGAAATC TCGAACAACTCACCGTTGACCATGAGGTGGGTCAGCGAGAATTACATCGGGGCGTCACCCCAGAGATTGCCTATGGGAGG CCCGATGCCTACCAACTGACCCAGGCCATTGGCCCCCGGGAAAATAGCTTTGTGGAGCCGGATATTAATTTTTTCCAGGT GAACGAAGATAGTCTGTTTTTGCTCTGTTCCGATGGCTTATCGGACAATGACTTAATTGAAACGACCTGGGAAGAAATGC TCCTCCCCCTCCTGAGTGCCCGGGCCAATTTAGATGAAGGGGTGCATCGCTTAATTGCCCTGGCTAATGAACGCAATGGT CATGACAACATTACGGCGGTGCTTGTGCGGTTACGGGTGCGTCCTAATATTGGGGCCTCAAGTTTTTAG
Upstream 100 bases:
>100_bases AGTTCCTAAAACACCCAAACTGTTTTTAAATTCAGGTTTCTCCCCCACAAGCTTAGGTTAAGCTTCGCGGGTCACCCCCA TCCAGAAGGCCCCTGTGACC
Downstream 100 bases:
>100_bases AAATCATGATTTCAGTGATTATGCCTGTTTTAAATGAGGCAGCTGGTATTGTCTCTTGTTTACAATCTTTGCTCCAAGTT CCCAATCCTTTAGAAATTAT
Product: putative protein serine/threonine phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 662; Mature: 662
Protein sequence:
>662_residues MVVCPQCTQENPPENRFCQYCGSSLTRPCPHCETPVRLQQEQCESCQGWVSRPLTALILDAEAASCQARETLDEAGRYRL GDRPTVRAETFPWLTVIDTAPETPTILETALQELEITDPTQLADPDLWQDKEIPAIARQYLSLQDNFSAVPKLQEAWRQP EYQVLLFEQRPQPLTPLKTYCQAQTPLYEQLLQWCFQMVQLWRELVPLQCCQTILEPINLYLDEDQSLVVRQLLQDDPDH LPALQRLPQLWQDLFHLSAQPEWQPLYELTETAQIGGLDTVSRLKKALRALAPENTDDFYGEVEGELEAIELQPEDLTTL DDVLLSADLGPEDLAETPDGETATANSGSETEDSPQIEHSGGSIASGDFEPLDFPEEEEASTVVLPMNLVSLDDAGCTDI GQERDHNEDYFGMRTRIEKQENLLGRQIQGRGFYVVCDGMGGHAAGEVASALSVETIQAFFQEHWQDELPDEAVMRQAIW ETNEAVYNINLKNSRSGSGRMGTTLVLMLVQDNQVAIAHVGDSRIYRVSRKGNLEQLTVDHEVGQRELHRGVTPEIAYGR PDAYQLTQAIGPRENSFVEPDINFFQVNEDSLFLLCSDGLSDNDLIETTWEEMLLPLLSARANLDEGVHRLIALANERNG HDNITAVLVRLRVRPNIGASSF
Sequences:
>Translated_662_residues MVVCPQCTQENPPENRFCQYCGSSLTRPCPHCETPVRLQQEQCESCQGWVSRPLTALILDAEAASCQARETLDEAGRYRL GDRPTVRAETFPWLTVIDTAPETPTILETALQELEITDPTQLADPDLWQDKEIPAIARQYLSLQDNFSAVPKLQEAWRQP EYQVLLFEQRPQPLTPLKTYCQAQTPLYEQLLQWCFQMVQLWRELVPLQCCQTILEPINLYLDEDQSLVVRQLLQDDPDH LPALQRLPQLWQDLFHLSAQPEWQPLYELTETAQIGGLDTVSRLKKALRALAPENTDDFYGEVEGELEAIELQPEDLTTL DDVLLSADLGPEDLAETPDGETATANSGSETEDSPQIEHSGGSIASGDFEPLDFPEEEEASTVVLPMNLVSLDDAGCTDI GQERDHNEDYFGMRTRIEKQENLLGRQIQGRGFYVVCDGMGGHAAGEVASALSVETIQAFFQEHWQDELPDEAVMRQAIW ETNEAVYNINLKNSRSGSGRMGTTLVLMLVQDNQVAIAHVGDSRIYRVSRKGNLEQLTVDHEVGQRELHRGVTPEIAYGR PDAYQLTQAIGPRENSFVEPDINFFQVNEDSLFLLCSDGLSDNDLIETTWEEMLLPLLSARANLDEGVHRLIALANERNG HDNITAVLVRLRVRPNIGASSF >Mature_662_residues MVVCPQCTQENPPENRFCQYCGSSLTRPCPHCETPVRLQQEQCESCQGWVSRPLTALILDAEAASCQARETLDEAGRYRL GDRPTVRAETFPWLTVIDTAPETPTILETALQELEITDPTQLADPDLWQDKEIPAIARQYLSLQDNFSAVPKLQEAWRQP EYQVLLFEQRPQPLTPLKTYCQAQTPLYEQLLQWCFQMVQLWRELVPLQCCQTILEPINLYLDEDQSLVVRQLLQDDPDH LPALQRLPQLWQDLFHLSAQPEWQPLYELTETAQIGGLDTVSRLKKALRALAPENTDDFYGEVEGELEAIELQPEDLTTL DDVLLSADLGPEDLAETPDGETATANSGSETEDSPQIEHSGGSIASGDFEPLDFPEEEEASTVVLPMNLVSLDDAGCTDI GQERDHNEDYFGMRTRIEKQENLLGRQIQGRGFYVVCDGMGGHAAGEVASALSVETIQAFFQEHWQDELPDEAVMRQAIW ETNEAVYNINLKNSRSGSGRMGTTLVLMLVQDNQVAIAHVGDSRIYRVSRKGNLEQLTVDHEVGQRELHRGVTPEIAYGR PDAYQLTQAIGPRENSFVEPDINFFQVNEDSLFLLCSDGLSDNDLIETTWEEMLLPLLSARANLDEGVHRLIALANERNG HDNITAVLVRLRVRPNIGASSF
Specific function: Protein phosphatase that dephosphorylates prkC and fusA (elongation factor G). PrpC and prkC are cotranscribed, which suggests that they form a functional couple in vivo, prpC's primary role being possibly to counter the action of prkC. May be involved in
COG id: COG0631
COG function: function code T; Serine/threonine protein phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PP2C-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015655 - InterPro: IPR001932 - InterPro: IPR014045 [H]
Pfam domain/function: PF00481 PP2C [H]
EC number: =3.1.3.16 [H]
Molecular weight: Translated: 74411; Mature: 74411
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVCPQCTQENPPENRFCQYCGSSLTRPCPHCETPVRLQQEQCESCQGWVSRPLTALILD CEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEC AEAASCQARETLDEAGRYRLGDRPTVRAETFPWLTVIDTAPETPTILETALQELEITDPT CCHHHHHHHHHHHHHCCEECCCCCCEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCC QLADPDLWQDKEIPAIARQYLSLQDNFSAVPKLQEAWRQPEYQVLLFEQRPQPLTPLKTY CCCCCCCCCCCCCHHHHHHHHHHHCCCHHCHHHHHHHCCCCEEEEEEECCCCCCCHHHHH CQAQTPLYEQLLQWCFQMVQLWRELVPLQCCQTILEPINLYLDEDQSLVVRQLLQDDPDH HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHCCCCC LPALQRLPQLWQDLFHLSAQPEWQPLYELTETAQIGGLDTVSRLKKALRALAPENTDDFY CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHH GEVEGELEAIELQPEDLTTLDDVLLSADLGPEDLAETPDGETATANSGSETEDSPQIEHS HCCCCCEEEEEECCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEECC GGSIASGDFEPLDFPEEEEASTVVLPMNLVSLDDAGCTDIGQERDHNEDYFGMRTRIEKQ CCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH ENLLGRQIQGRGFYVVCDGMGGHAAGEVASALSVETIQAFFQEHWQDELPDEAVMRQAIW HHHHCCEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH ETNEAVYNINLKNSRSGSGRMGTTLVLMLVQDNQVAIAHVGDSRIYRVSRKGNLEQLTVD CCCCEEEEEEECCCCCCCCCCCCEEEEEEEECCCEEEEEECCCEEEEECCCCCCEEEEEC HEVGQRELHRGVTPEIAYGRPDAYQLTQAIGPRENSFVEPDINFFQVNEDSLFLLCSDGL HHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCEECCCCCEEEECCCCEEEEECCCC SDNDLIETTWEEMLLPLLSARANLDEGVHRLIALANERNGHDNITAVLVRLRVRPNIGAS CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHEECCCCCCC SF CC >Mature Secondary Structure MVVCPQCTQENPPENRFCQYCGSSLTRPCPHCETPVRLQQEQCESCQGWVSRPLTALILD CEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEC AEAASCQARETLDEAGRYRLGDRPTVRAETFPWLTVIDTAPETPTILETALQELEITDPT CCHHHHHHHHHHHHHCCEECCCCCCEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCC QLADPDLWQDKEIPAIARQYLSLQDNFSAVPKLQEAWRQPEYQVLLFEQRPQPLTPLKTY CCCCCCCCCCCCCHHHHHHHHHHHCCCHHCHHHHHHHCCCCEEEEEEECCCCCCCHHHHH CQAQTPLYEQLLQWCFQMVQLWRELVPLQCCQTILEPINLYLDEDQSLVVRQLLQDDPDH HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHCCCCC LPALQRLPQLWQDLFHLSAQPEWQPLYELTETAQIGGLDTVSRLKKALRALAPENTDDFY CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHH GEVEGELEAIELQPEDLTTLDDVLLSADLGPEDLAETPDGETATANSGSETEDSPQIEHS HCCCCCEEEEEECCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEECC GGSIASGDFEPLDFPEEEEASTVVLPMNLVSLDDAGCTDIGQERDHNEDYFGMRTRIEKQ CCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH ENLLGRQIQGRGFYVVCDGMGGHAAGEVASALSVETIQAFFQEHWQDELPDEAVMRQAIW HHHHCCEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH ETNEAVYNINLKNSRSGSGRMGTTLVLMLVQDNQVAIAHVGDSRIYRVSRKGNLEQLTVD CCCCEEEEEEECCCCCCCCCCCCEEEEEEEECCCEEEEEECCCEEEEECCCCCCEEEEEC HEVGQRELHRGVTPEIAYGRPDAYQLTQAIGPRENSFVEPDINFFQVNEDSLFLLCSDGL HHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCEECCCCCEEEECCCCEEEEECCCC SDNDLIETTWEEMLLPLLSARANLDEGVHRLIALANERNGHDNITAVLVRLRVRPNIGAS CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHEECCCCCCC SF CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9534248; 9384377 [H]