Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is 170079293

Identifier: 170079293

GI number: 170079293

Start: 2829489

End: 2830160

Strand: Reverse

Name: 170079293

Synonym: SYNPCC7002_A2700

Alternate gene names: NA

Gene position: 2830160-2829489 (Counterclockwise)

Preceding gene: 170079294

Following gene: 170079291

Centisome position: 94.09

GC content: 49.7

Gene sequence:

>672_bases
ATGCCTGTTTTAAATGAGGCAGCTGGTATTGTCTCTTGTTTACAATCTTTGCTCCAAGTTCCCAATCCTTTAGAAATTAT
TGTTGTGGATGGGGGCAGTCAGGATCCGACTTGTGATCTAGTACGTCAGTTTCCGGTGACCCTTTGTCAAACCAGTGGGG
GGCGCGGCAAACAAATGAATCGAGGGGCAGCGATCGCCCAAGGAGACATTTTTCTGTTTCTCCATGGCGATACCCAATTA
CCCCAGGACTTTGCTGCCCTTGTGACAGAGACCTTGGCGGATTCCCAAGTGGTGGCTGGAGCCTTTCCTTTAGGAATTGC
CGATTCCCGGTGGCGATTTCGTGCCTTAGAAAAGTTGGTGCAATGGCGATCGCAACTTTTGGCTTTGCCCTACGGTGACC
AGGCCATTTTTTTGCGGCGTCAGGATTTTGAAGCCCTGGGGGGTTATGCCGAAATTCCCATTATGGAAGACTATGAGCTA
ATGCAACGGCTGAGAAAACGGGGCAAGATTCGTCTGACAAGCCAACCTGTACAAACTTCGGCTCGCAGATGGCAGCGACT
GGGTCTGTGGCGCACCACTTGGATTAACCAAAAAATGCTTCTCGGTTATCATCTCGGCATTGATCCAGAGATTCTCCGTC
ACTGGTATCGTCAACAAATCCGTGATTCGTAA

Upstream 100 bases:

>100_bases
AACGCAATGGTCATGACAACATTACGGCGGTGCTTGTGCGGTTACGGGTGCGTCCTAATATTGGGGCCTCAAGTTTTTAG
AAATCATGATTTCAGTGATT

Downstream 100 bases:

>100_bases
TCAAAGATTGTTATTGGGGCTTGTTCAGATTATCAAGCTGTTCTCGGAGGCGATCGCAAAAACCATACAATTCATCCAAA
GCATTAAGGGGAGCCGGATT

Product: glycosyl transferase, group 2 family protein

Products: NA

Alternate protein names: Glycosyl Transferase Group 2 Family Protein; Glycosyl Transferase; Glycosyltransferase; Family 2 Glycosyl Transferase; Cell Wall Biosynthesis Glycosyltransferase; Glycosyltransferase Involved In Cell Wall Biogenesis; Glycosyl Transferase Family 2 Protein; Cell Wall Biogenesis Glycosyltransferase; Glycosyl Transferase-Related Protein; Glycosyltransferase Group 2 Family Protein; Glycosyl Transferase Group 2 Family; Glycosyltransferases Involved In Cell Wall Biogenesis

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MPVLNEAAGIVSCLQSLLQVPNPLEIIVVDGGSQDPTCDLVRQFPVTLCQTSGGRGKQMNRGAAIAQGDIFLFLHGDTQL
PQDFAALVTETLADSQVVAGAFPLGIADSRWRFRALEKLVQWRSQLLALPYGDQAIFLRRQDFEALGGYAEIPIMEDYEL
MQRLRKRGKIRLTSQPVQTSARRWQRLGLWRTTWINQKMLLGYHLGIDPEILRHWYRQQIRDS

Sequences:

>Translated_223_residues
MPVLNEAAGIVSCLQSLLQVPNPLEIIVVDGGSQDPTCDLVRQFPVTLCQTSGGRGKQMNRGAAIAQGDIFLFLHGDTQL
PQDFAALVTETLADSQVVAGAFPLGIADSRWRFRALEKLVQWRSQLLALPYGDQAIFLRRQDFEALGGYAEIPIMEDYEL
MQRLRKRGKIRLTSQPVQTSARRWQRLGLWRTTWINQKMLLGYHLGIDPEILRHWYRQQIRDS
>Mature_222_residues
PVLNEAAGIVSCLQSLLQVPNPLEIIVVDGGSQDPTCDLVRQFPVTLCQTSGGRGKQMNRGAAIAQGDIFLFLHGDTQLP
QDFAALVTETLADSQVVAGAFPLGIADSRWRFRALEKLVQWRSQLLALPYGDQAIFLRRQDFEALGGYAEIPIMEDYELM
QRLRKRGKIRLTSQPVQTSARRWQRLGLWRTTWINQKMLLGYHLGIDPEILRHWYRQQIRDS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25317; Mature: 25185

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVLNEAAGIVSCLQSLLQVPNPLEIIVVDGGSQDPTCDLVRQFPVTLCQTSGGRGKQMN
CCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
RGAAIAQGDIFLFLHGDTQLPQDFAALVTETLADSQVVAGAFPLGIADSRWRFRALEKLV
CCCEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHH
QWRSQLLALPYGDQAIFLRRQDFEALGGYAEIPIMEDYELMQRLRKRGKIRLTSQPVQTS
HHHHHHCCCCCCCCEEEEECCCHHHHCCEECCCCCCCHHHHHHHHHCCCEEEECCCHHHH
ARRWQRLGLWRTTWINQKMLLGYHLGIDPEILRHWYRQQIRDS
HHHHHHHCCHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PVLNEAAGIVSCLQSLLQVPNPLEIIVVDGGSQDPTCDLVRQFPVTLCQTSGGRGKQMN
CCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
RGAAIAQGDIFLFLHGDTQLPQDFAALVTETLADSQVVAGAFPLGIADSRWRFRALEKLV
CCCEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHH
QWRSQLLALPYGDQAIFLRRQDFEALGGYAEIPIMEDYELMQRLRKRGKIRLTSQPVQTS
HHHHHHCCCCCCCCEEEEECCCHHHHCCEECCCCCCCHHHHHHHHHCCCEEEECCCHHHH
ARRWQRLGLWRTTWINQKMLLGYHLGIDPEILRHWYRQQIRDS
HHHHHHHCCHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA