| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is menC [H]
Identifier: 170079236
GI number: 170079236
Start: 2773808
End: 2774719
Strand: Reverse
Name: menC [H]
Synonym: SYNPCC7002_A2642
Alternate gene names: 170079236
Gene position: 2774719-2773808 (Counterclockwise)
Preceding gene: 170079237
Following gene: 170079235
Centisome position: 92.24
GC content: 48.14
Gene sequence:
>912_bases GTGAATTATCGGTTTCGCTTTGCCCCCTATCAGCGCCCCTTTAAAACGCCTTTGCAAACTCACCATGGTCTGTGGACGGT GCGGGAGGGAATTATTCTTTCCCTGCGAGATGAAAGGGGACGGATTACTCAGGGGGAAATTGTGCCTTTGCCGTGGTTTG GGACAGAAACCCTAGAGGAGGCGATCGCCTTTTGTGCTGCCTTTGGGGGAAACATTACCAGTGAGCAAATTGCGGCAATT CCTGATGCTTTACCAGCTTGTCAATTCGGTTTTGAAACGGCTCAACTTAACCTTGCCAGTACCGAAAATTTAGTATCCTT ACCCCCTACAAAATTCTGTCAGTTAATCCGGCGATCGCCCACCCTGTTCCAAGATCTACAAACTTTACTACAACAAGGAT TTCGCACCTTTAAACTGAAAATTGCCCTGGATATACCCGCAACAGAAATCGCCCTCTGTCAGCAGATCCTCGAAACCTTG CCCGCTGATGGTCGGTTGCGCCTCGATGCCAATGGCGGTTTAACCCTAGAACAAGTGAAACAATGGTTAGATTGGGGCGA ATCTCAAGCAAAACTAGAATTTATCGAGCAGCCCTTAGCTCCTGCGCATTTTTCGAATTTATTGCAGTTAAATGCCGAAT TTCAGACCCAAATTGCCCTCGATGAGTCCGTTTCCCAGGTCGCTTCTTTAGAACATTGTTATGCCCAGGGTTGGCGCGGT GTCTTTGTGATCAAATTGGCGATCGCCGGCTTTCCGTCCCGTCTTCAAGATGTCTGTCAAACTAAAAAGCTGGATTTTGT ACTCTCTACTGTTTTTGAAACGGCAGTCGGCCAACGGGCACTTTTAAATTTTTCTCAGGATTTTGTCCAGTCCCGACGAG CCTTGGGTATGGGCGGCACCCAGTGGATTTGA
Upstream 100 bases:
>100_bases ATATGAACACTGCGACCAAAATATTTTAGGGTTTGCGGCGAATATGAGTCGGCCTTTGACCTTCCTGGAAAATCTTCCTG ATGTGCAGCGGGTCGCGTAG
Downstream 100 bases:
>100_bases TGTTACGATGCTGAATATCCGTTTCCAACACCTGTAATGATTATGAATATTGCAGATTTGCATCCGAAATATGTCACAGA TTCAAGCGGGAAACAAACAG
Product: O-succinylbenzoate synthase
Products: NA
Alternate protein names: OSB synthase; OSBS; 4-(2'-carboxyphenyl)-4-oxybutyric acid synthase; o-succinylbenzoic acid synthase [H]
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MNYRFRFAPYQRPFKTPLQTHHGLWTVREGIILSLRDERGRITQGEIVPLPWFGTETLEEAIAFCAAFGGNITSEQIAAI PDALPACQFGFETAQLNLASTENLVSLPPTKFCQLIRRSPTLFQDLQTLLQQGFRTFKLKIALDIPATEIALCQQILETL PADGRLRLDANGGLTLEQVKQWLDWGESQAKLEFIEQPLAPAHFSNLLQLNAEFQTQIALDESVSQVASLEHCYAQGWRG VFVIKLAIAGFPSRLQDVCQTKKLDFVLSTVFETAVGQRALLNFSQDFVQSRRALGMGGTQWI
Sequences:
>Translated_303_residues MNYRFRFAPYQRPFKTPLQTHHGLWTVREGIILSLRDERGRITQGEIVPLPWFGTETLEEAIAFCAAFGGNITSEQIAAI PDALPACQFGFETAQLNLASTENLVSLPPTKFCQLIRRSPTLFQDLQTLLQQGFRTFKLKIALDIPATEIALCQQILETL PADGRLRLDANGGLTLEQVKQWLDWGESQAKLEFIEQPLAPAHFSNLLQLNAEFQTQIALDESVSQVASLEHCYAQGWRG VFVIKLAIAGFPSRLQDVCQTKKLDFVLSTVFETAVGQRALLNFSQDFVQSRRALGMGGTQWI >Mature_303_residues MNYRFRFAPYQRPFKTPLQTHHGLWTVREGIILSLRDERGRITQGEIVPLPWFGTETLEEAIAFCAAFGGNITSEQIAAI PDALPACQFGFETAQLNLASTENLVSLPPTKFCQLIRRSPTLFQDLQTLLQQGFRTFKLKIALDIPATEIALCQQILETL PADGRLRLDANGGLTLEQVKQWLDWGESQAKLEFIEQPLAPAHFSNLLQLNAEFQTQIALDESVSQVASLEHCYAQGWRG VFVIKLAIAGFPSRLQDVCQTKKLDFVLSTVFETAVGQRALLNFSQDFVQSRRALGMGGTQWI
Specific function: Converts SHCHC to OSB [H]
COG id: COG4948
COG function: function code MR; L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mandelate racemase/muconate lactonizing enzyme family. MenC type 1 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013342 - InterPro: IPR001354 - InterPro: IPR010196 [H]
Pfam domain/function: PF01188 MR_MLE [H]
EC number: =4.2.1.113 [H]
Molecular weight: Translated: 33956; Mature: 33956
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYRFRFAPYQRPFKTPLQTHHGLWTVREGIILSLRDERGRITQGEIVPLPWFGTETLEE CCCEEECCCCCCCCCCCHHHHCCCEEECCCEEEEEECCCCCCCCCCEEECCCCCHHHHHH AIAFCAAFGGNITSEQIAAIPDALPACQFGFETAQLNLASTENLVSLPPTKFCQLIRRSP HHHHHHHHCCCCCHHHHHHCCCHHHHHHCCCCHHEEEECCCCCCCCCCHHHHHHHHHCCC TLFQDLQTLLQQGFRTFKLKIALDIPATEIALCQQILETLPADGRLRLDANGGLTLEQVK HHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHH QWLDWGESQAKLEFIEQPLAPAHFSNLLQLNAEFQTQIALDESVSQVASLEHCYAQGWRG HHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC VFVIKLAIAGFPSRLQDVCQTKKLDFVLSTVFETAVGQRALLNFSQDFVQSRRALGMGGT EEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC QWI CCC >Mature Secondary Structure MNYRFRFAPYQRPFKTPLQTHHGLWTVREGIILSLRDERGRITQGEIVPLPWFGTETLEE CCCEEECCCCCCCCCCCHHHHCCCEEECCCEEEEEECCCCCCCCCCEEECCCCCHHHHHH AIAFCAAFGGNITSEQIAAIPDALPACQFGFETAQLNLASTENLVSLPPTKFCQLIRRSP HHHHHHHHCCCCCHHHHHHCCCHHHHHHCCCCHHEEEECCCCCCCCCCHHHHHHHHHCCC TLFQDLQTLLQQGFRTFKLKIALDIPATEIALCQQILETLPADGRLRLDANGGLTLEQVK HHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHH QWLDWGESQAKLEFIEQPLAPAHFSNLLQLNAEFQTQIALDESVSQVASLEHCYAQGWRG HHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC VFVIKLAIAGFPSRLQDVCQTKKLDFVLSTVFETAVGQRALLNFSQDFVQSRRALGMGGT EEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC QWI CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]