| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079237
Identifier: 170079237
GI number: 170079237
Start: 2774720
End: 2775502
Strand: Reverse
Name: 170079237
Synonym: SYNPCC7002_A2643
Alternate gene names: NA
Gene position: 2775502-2774720 (Counterclockwise)
Preceding gene: 170079239
Following gene: 170079236
Centisome position: 92.27
GC content: 51.47
Gene sequence:
>783_bases GTGGATTATCTTCAGTTTTTTCAACACACAGAACGGCAGCGGGTGAGCGATGGTCAACTGACACCGTTGGTACCGTCTGG TTTGACTCGACCCCTTATGGTGCTGATCCTATCCCAACTCGGCGATTTTGACAGTCTTGAGTATGCTTGGTGGCTCCAAA AAGATGCTGATCTCTGTCGCCGGGTAGATTATGTCGCGGTGGGCATTGGCGATCGCCGTTCCGGTCAAAAATTTTGTGAC TACACGGGTTTCCCGGCCGAGAAATTATTCATCGATCCCAAGGCAACGATTCATCAAGAACTGGGCCTATATCGCGGTTT AACCTGGAAAATTCCCGGACTCAACGCAGGCCAAAATGCCTGGGTGAATCTGATGCTGATGTGTGCTGGCATTGGCAGTC CGGGCACCCTCAAGGAAGTTTTGCGGGGTTATACAGGGGATAAAAAAGCGCCCCAACTGTTTGCCGATGATGAAGTCGTT AAAGCGGCTCCTTTACCAGCCCTAAAAGGAGAATTTTTTGCGGCGGCTGGCGGGAAGGGTTTTCAGCGGCCCTTAGAATT GGCGACCCTCCGCCTGCGGAATATGGCCGAAGTCCTGGGGAATTGGTCTACCTATGTGCCCGATGCCCAGTACATGACCC AAAGAGGAGCGACATTCTTATTTGATGCCGATGGTGCGTTGCAATATGAACACTGCGACCAAAATATTTTAGGGTTTGCG GCGAATATGAGTCGGCCTTTGACCTTCCTGGAAAATCTTCCTGATGTGCAGCGGGTCGCGTAG
Upstream 100 bases:
>100_bases CACTGTAGCATTTTTAAAAGAAATCTGTTTATCCTGACGAAGGTGAGGCTATGGCTCCATAGCAACCCTTGTTCTCTATC CTAAATGTTTCCCAATAACC
Downstream 100 bases:
>100_bases GTGAATTATCGGTTTCGCTTTGCCCCCTATCAGCGCCCCTTTAAAACGCCTTTGCAAACTCACCATGGTCTGTGGACGGT GCGGGAGGGAATTATTCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MDYLQFFQHTERQRVSDGQLTPLVPSGLTRPLMVLILSQLGDFDSLEYAWWLQKDADLCRRVDYVAVGIGDRRSGQKFCD YTGFPAEKLFIDPKATIHQELGLYRGLTWKIPGLNAGQNAWVNLMLMCAGIGSPGTLKEVLRGYTGDKKAPQLFADDEVV KAAPLPALKGEFFAAAGGKGFQRPLELATLRLRNMAEVLGNWSTYVPDAQYMTQRGATFLFDADGALQYEHCDQNILGFA ANMSRPLTFLENLPDVQRVA
Sequences:
>Translated_260_residues MDYLQFFQHTERQRVSDGQLTPLVPSGLTRPLMVLILSQLGDFDSLEYAWWLQKDADLCRRVDYVAVGIGDRRSGQKFCD YTGFPAEKLFIDPKATIHQELGLYRGLTWKIPGLNAGQNAWVNLMLMCAGIGSPGTLKEVLRGYTGDKKAPQLFADDEVV KAAPLPALKGEFFAAAGGKGFQRPLELATLRLRNMAEVLGNWSTYVPDAQYMTQRGATFLFDADGALQYEHCDQNILGFA ANMSRPLTFLENLPDVQRVA >Mature_260_residues MDYLQFFQHTERQRVSDGQLTPLVPSGLTRPLMVLILSQLGDFDSLEYAWWLQKDADLCRRVDYVAVGIGDRRSGQKFCD YTGFPAEKLFIDPKATIHQELGLYRGLTWKIPGLNAGQNAWVNLMLMCAGIGSPGTLKEVLRGYTGDKKAPQLFADDEVV KAAPLPALKGEFFAAAGGKGFQRPLELATLRLRNMAEVLGNWSTYVPDAQYMTQRGATFLFDADGALQYEHCDQNILGFA ANMSRPLTFLENLPDVQRVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28973; Mature: 28973
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYLQFFQHTERQRVSDGQLTPLVPSGLTRPLMVLILSQLGDFDSLEYAWWLQKDADLCR CCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHH RVDYVAVGIGDRRSGQKFCDYTGFPAEKLFIDPKATIHQELGLYRGLTWKIPGLNAGQNA HHCEEEEECCCCCCCCHHHCCCCCCHHHEEECCHHHHHHHHHHHCCCEEECCCCCCCCHH WVNLMLMCAGIGSPGTLKEVLRGYTGDKKAPQLFADDEVVKAAPLPALKGEFFAAAGGKG HHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEECCCCC FQRPLELATLRLRNMAEVLGNWSTYVPDAQYMTQRGATFLFDADGALQYEHCDQNILGFA CHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHCCCEEEEECCCCEEHHHCCCHHHHHH ANMSRPLTFLENLPDVQRVA HCCCCCHHHHHCCCHHHHCC >Mature Secondary Structure MDYLQFFQHTERQRVSDGQLTPLVPSGLTRPLMVLILSQLGDFDSLEYAWWLQKDADLCR CCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHH RVDYVAVGIGDRRSGQKFCDYTGFPAEKLFIDPKATIHQELGLYRGLTWKIPGLNAGQNA HHCEEEEECCCCCCCCHHHCCCCCCHHHEEECCHHHHHHHHHHHCCCEEECCCCCCCCHH WVNLMLMCAGIGSPGTLKEVLRGYTGDKKAPQLFADDEVVKAAPLPALKGEFFAAAGGKG HHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEECCCCC FQRPLELATLRLRNMAEVLGNWSTYVPDAQYMTQRGATFLFDADGALQYEHCDQNILGFA CHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHCCCEEEEECCCCEEHHHCCCHHHHHH ANMSRPLTFLENLPDVQRVA HCCCCCHHHHHCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA