Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170079237

Identifier: 170079237

GI number: 170079237

Start: 2774720

End: 2775502

Strand: Reverse

Name: 170079237

Synonym: SYNPCC7002_A2643

Alternate gene names: NA

Gene position: 2775502-2774720 (Counterclockwise)

Preceding gene: 170079239

Following gene: 170079236

Centisome position: 92.27

GC content: 51.47

Gene sequence:

>783_bases
GTGGATTATCTTCAGTTTTTTCAACACACAGAACGGCAGCGGGTGAGCGATGGTCAACTGACACCGTTGGTACCGTCTGG
TTTGACTCGACCCCTTATGGTGCTGATCCTATCCCAACTCGGCGATTTTGACAGTCTTGAGTATGCTTGGTGGCTCCAAA
AAGATGCTGATCTCTGTCGCCGGGTAGATTATGTCGCGGTGGGCATTGGCGATCGCCGTTCCGGTCAAAAATTTTGTGAC
TACACGGGTTTCCCGGCCGAGAAATTATTCATCGATCCCAAGGCAACGATTCATCAAGAACTGGGCCTATATCGCGGTTT
AACCTGGAAAATTCCCGGACTCAACGCAGGCCAAAATGCCTGGGTGAATCTGATGCTGATGTGTGCTGGCATTGGCAGTC
CGGGCACCCTCAAGGAAGTTTTGCGGGGTTATACAGGGGATAAAAAAGCGCCCCAACTGTTTGCCGATGATGAAGTCGTT
AAAGCGGCTCCTTTACCAGCCCTAAAAGGAGAATTTTTTGCGGCGGCTGGCGGGAAGGGTTTTCAGCGGCCCTTAGAATT
GGCGACCCTCCGCCTGCGGAATATGGCCGAAGTCCTGGGGAATTGGTCTACCTATGTGCCCGATGCCCAGTACATGACCC
AAAGAGGAGCGACATTCTTATTTGATGCCGATGGTGCGTTGCAATATGAACACTGCGACCAAAATATTTTAGGGTTTGCG
GCGAATATGAGTCGGCCTTTGACCTTCCTGGAAAATCTTCCTGATGTGCAGCGGGTCGCGTAG

Upstream 100 bases:

>100_bases
CACTGTAGCATTTTTAAAAGAAATCTGTTTATCCTGACGAAGGTGAGGCTATGGCTCCATAGCAACCCTTGTTCTCTATC
CTAAATGTTTCCCAATAACC

Downstream 100 bases:

>100_bases
GTGAATTATCGGTTTCGCTTTGCCCCCTATCAGCGCCCCTTTAAAACGCCTTTGCAAACTCACCATGGTCTGTGGACGGT
GCGGGAGGGAATTATTCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MDYLQFFQHTERQRVSDGQLTPLVPSGLTRPLMVLILSQLGDFDSLEYAWWLQKDADLCRRVDYVAVGIGDRRSGQKFCD
YTGFPAEKLFIDPKATIHQELGLYRGLTWKIPGLNAGQNAWVNLMLMCAGIGSPGTLKEVLRGYTGDKKAPQLFADDEVV
KAAPLPALKGEFFAAAGGKGFQRPLELATLRLRNMAEVLGNWSTYVPDAQYMTQRGATFLFDADGALQYEHCDQNILGFA
ANMSRPLTFLENLPDVQRVA

Sequences:

>Translated_260_residues
MDYLQFFQHTERQRVSDGQLTPLVPSGLTRPLMVLILSQLGDFDSLEYAWWLQKDADLCRRVDYVAVGIGDRRSGQKFCD
YTGFPAEKLFIDPKATIHQELGLYRGLTWKIPGLNAGQNAWVNLMLMCAGIGSPGTLKEVLRGYTGDKKAPQLFADDEVV
KAAPLPALKGEFFAAAGGKGFQRPLELATLRLRNMAEVLGNWSTYVPDAQYMTQRGATFLFDADGALQYEHCDQNILGFA
ANMSRPLTFLENLPDVQRVA
>Mature_260_residues
MDYLQFFQHTERQRVSDGQLTPLVPSGLTRPLMVLILSQLGDFDSLEYAWWLQKDADLCRRVDYVAVGIGDRRSGQKFCD
YTGFPAEKLFIDPKATIHQELGLYRGLTWKIPGLNAGQNAWVNLMLMCAGIGSPGTLKEVLRGYTGDKKAPQLFADDEVV
KAAPLPALKGEFFAAAGGKGFQRPLELATLRLRNMAEVLGNWSTYVPDAQYMTQRGATFLFDADGALQYEHCDQNILGFA
ANMSRPLTFLENLPDVQRVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28973; Mature: 28973

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYLQFFQHTERQRVSDGQLTPLVPSGLTRPLMVLILSQLGDFDSLEYAWWLQKDADLCR
CCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHH
RVDYVAVGIGDRRSGQKFCDYTGFPAEKLFIDPKATIHQELGLYRGLTWKIPGLNAGQNA
HHCEEEEECCCCCCCCHHHCCCCCCHHHEEECCHHHHHHHHHHHCCCEEECCCCCCCCHH
WVNLMLMCAGIGSPGTLKEVLRGYTGDKKAPQLFADDEVVKAAPLPALKGEFFAAAGGKG
HHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEECCCCC
FQRPLELATLRLRNMAEVLGNWSTYVPDAQYMTQRGATFLFDADGALQYEHCDQNILGFA
CHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHCCCEEEEECCCCEEHHHCCCHHHHHH
ANMSRPLTFLENLPDVQRVA
HCCCCCHHHHHCCCHHHHCC
>Mature Secondary Structure
MDYLQFFQHTERQRVSDGQLTPLVPSGLTRPLMVLILSQLGDFDSLEYAWWLQKDADLCR
CCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHH
RVDYVAVGIGDRRSGQKFCDYTGFPAEKLFIDPKATIHQELGLYRGLTWKIPGLNAGQNA
HHCEEEEECCCCCCCCHHHCCCCCCHHHEEECCHHHHHHHHHHHCCCEEECCCCCCCCHH
WVNLMLMCAGIGSPGTLKEVLRGYTGDKKAPQLFADDEVVKAAPLPALKGEFFAAAGGKG
HHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEECCCCC
FQRPLELATLRLRNMAEVLGNWSTYVPDAQYMTQRGATFLFDADGALQYEHCDQNILGFA
CHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHCCCEEEEECCCCEEHHHCCCHHHHHH
ANMSRPLTFLENLPDVQRVA
HCCCCCHHHHHCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA