Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170079213

Identifier: 170079213

GI number: 170079213

Start: 2748970

End: 2749668

Strand: Reverse

Name: 170079213

Synonym: SYNPCC7002_A2619

Alternate gene names: NA

Gene position: 2749668-2748970 (Counterclockwise)

Preceding gene: 170079214

Following gene: 170079211

Centisome position: 91.41

GC content: 51.36

Gene sequence:

>699_bases
ATGATATCTCAACCCAAAAGCTTGCAATGGTGGCAAAAACTGGGGGTGTGGCTCGCAACGGTATTGTTTACCTTTGGGAG
TTTTGTTTCGGCAGCCCAGGCCACTGGTGTTTATGATGTGCCCTACGCCACGGGGGATCAACCGATCTGGATTGTGGATC
AAGCAGAAGCAATTAGTCGTGCCAACGAAGGACGTTTAAATCGAGAGCTCAGCGAGTTAGCGGACACAACGGGCAAGGGT
CTGCATTTTGTCGCGATTCGTCGCCTTGATTATGGTCAAACCATGGAAGAATTTACCGACAAGGTCTTTGCCAAGTGGTT
TCCGACACCGGAGGCAGGGGCCGATGAAATCGTGGTGGCGATGGATGTGCTGACGAATAATGTGGCGATCGCCTTGGGAA
ATAATATCCAGGAGTTGATTCCACCGGAGACAGCCGAGAGTATTACCGGAGAAACGATCGGTTACCCCCTGCGCAGCAGT
TCCTATAACCAAGCCTTCCTGGATGCTGAGGCCCGCATTGGCACCATTTTGAACGGGGAAGCAGATCCTGGCCCCCCAGA
CATTGCCGAAATTAACATCGAAAGCACTTTCACCAAGGCCGAAGACACAAAAACAACCAGTTCAACCATTTGGGTTGTGG
TGTTGCTTCTCTTGGCGACAATCATTCCCATGGCTACTTACTGGTGGTACGTGCGCTAG

Upstream 100 bases:

>100_bases
TAATCGGCACGGCTCAAAGGTCAGTTAGTTTCGGTGGCGATCGCCCTTGGTTTATTCTAGAACCTAAAAGATACGCACAA
TTTTTGGACTAGTTTTTAAG

Downstream 100 bases:

>100_bases
GGATTAACTTTTGCCAGGATTAAGCCAAATCATTTCCCAGGTGATGTAGGTGCCGACTGGACTCCACAGCAAAAAAGGCA
ACAGAAGCCAAAAACTCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MISQPKSLQWWQKLGVWLATVLFTFGSFVSAAQATGVYDVPYATGDQPIWIVDQAEAISRANEGRLNRELSELADTTGKG
LHFVAIRRLDYGQTMEEFTDKVFAKWFPTPEAGADEIVVAMDVLTNNVAIALGNNIQELIPPETAESITGETIGYPLRSS
SYNQAFLDAEARIGTILNGEADPGPPDIAEINIESTFTKAEDTKTTSSTIWVVVLLLLATIIPMATYWWYVR

Sequences:

>Translated_232_residues
MISQPKSLQWWQKLGVWLATVLFTFGSFVSAAQATGVYDVPYATGDQPIWIVDQAEAISRANEGRLNRELSELADTTGKG
LHFVAIRRLDYGQTMEEFTDKVFAKWFPTPEAGADEIVVAMDVLTNNVAIALGNNIQELIPPETAESITGETIGYPLRSS
SYNQAFLDAEARIGTILNGEADPGPPDIAEINIESTFTKAEDTKTTSSTIWVVVLLLLATIIPMATYWWYVR
>Mature_232_residues
MISQPKSLQWWQKLGVWLATVLFTFGSFVSAAQATGVYDVPYATGDQPIWIVDQAEAISRANEGRLNRELSELADTTGKG
LHFVAIRRLDYGQTMEEFTDKVFAKWFPTPEAGADEIVVAMDVLTNNVAIALGNNIQELIPPETAESITGETIGYPLRSS
SYNQAFLDAEARIGTILNGEADPGPPDIAEINIESTFTKAEDTKTTSSTIWVVVLLLLATIIPMATYWWYVR

Specific function: Unknown

COG id: COG1512

COG function: function code R; Beta-propeller domains of methanol dehydrogenase type

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25580; Mature: 25580

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISQPKSLQWWQKLGVWLATVLFTFGSFVSAAQATGVYDVPYATGDQPIWIVDQAEAISR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCEEEEECHHHHHH
ANEGRLNRELSELADTTGKGLHFVAIRRLDYGQTMEEFTDKVFAKWFPTPEAGADEIVVA
CCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEH
MDVLTNNVAIALGNNIQELIPPETAESITGETIGYPLRSSSYNQAFLDAEARIGTILNGE
EEHHHCCEEEEECCCHHHHCCCCHHHHCCCCCCCCCCCCCCCCHHHHCCHHHCCEEECCC
ADPGPPDIAEINIESTFTKAEDTKTTSSTIWVVVLLLLATIIPMATYWWYVR
CCCCCCCEEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure
MISQPKSLQWWQKLGVWLATVLFTFGSFVSAAQATGVYDVPYATGDQPIWIVDQAEAISR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCEEEEECHHHHHH
ANEGRLNRELSELADTTGKGLHFVAIRRLDYGQTMEEFTDKVFAKWFPTPEAGADEIVVA
CCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEH
MDVLTNNVAIALGNNIQELIPPETAESITGETIGYPLRSSSYNQAFLDAEARIGTILNGE
EEHHHCCEEEEECCCHHHHCCCCHHHHCCCCCCCCCCCCCCCCHHHHCCHHHCCEEECCC
ADPGPPDIAEINIESTFTKAEDTKTTSSTIWVVVLLLLATIIPMATYWWYVR
CCCCCCCEEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA