| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079211
Identifier: 170079211
GI number: 170079211
Start: 2747089
End: 2748411
Strand: Reverse
Name: 170079211
Synonym: SYNPCC7002_A2617
Alternate gene names: NA
Gene position: 2748411-2747089 (Counterclockwise)
Preceding gene: 170079213
Following gene: 170079205
Centisome position: 91.37
GC content: 51.32
Gene sequence:
>1323_bases ATGACCTTCTCGCCCCAACTAATGCGCGCCGTTGAAACCCTCCAATATCGAGCGACTGTCGGGGAAGTGGCGACCCAGGC TGGCCTAGAACTCAATGTGGCCCAAAACGGTCTTTATAATCTCGCGGCCGATGCCGGCGGACACCTCCAGGTGGCAGAAA CCGGGGATGTTGTCTTTGAGTTTCCCAAAAATTTCCGGACGATCCTCCGCAATAAGTATTTTAAAATTCGGCTCCAGGAA TGGCTCGATAAAACCTGGCGAGTTGTCTTTTTCCTAATTCGGATCTCCTTTGGCATCGCCTTGATTCTTTCGATTCTTTT GATGACGATCGCCATTCTGGCTCTAGTGACAGCCGCTAGTAGTCAGGACAATAATAATTCCTCCCGTCGTCGTAGTTCTT CTTTTAATCTACCCTGGCTCGTTTGGTGGGGGCCTAATCCATTTCGTGTCTTTAGCCCTAACTACTACGGCCCCCGACGC TATGGTTCTTCAGCAACCTTAAAAAACACGACGAGCAACACCGAGAAGGGGGGAATGAATTTCCTCGAAGCCGTTTTTTC GTTTCTATTCGGTGATGGCGACCCCAACCCAAACCTTGAGGAGCGTCGCTGGCAGACCATTGGTCAGGTCATCCAAAACA ATGACGGAGCCGTGATCGCCGAACAACTTGCGCCCTATTTCGACGAACTATCACCCACAGAGAAGAATGAGGAAAGTTAT ATGTTGCCGGTTTTAGCCCGGTTCAATGGCTACCCGGAAGTCTCCCCTACAGGCGATTTAGTTTATTATTTCCCGGAACT ACAGGTCAAAGCCCAGGAACGCCGCCAGAAATCTGTCCCCAACTATTTAGAAGAACATCGTTGGACATTTACCCTTGCCC CCACTGGACAAAAATTTTTGGCGATCGCCCTTGGGGGTGTCAACTTAGTCTTGGCCCTGATGCTAGGCGTTTTATTGCAA GATTCAGCCCTGGTGGCCGAACTTGGCGGCTTGGTGGGTCTTGCCCAGGCCCTTTATCCCCTCTTGTTCGCCTATGCGAT CGCCTTTTTGGCCGTTCCCCTAGGCCGTTACTTTTGGCTCCAGCGCCGCAACCAAACCATCGAAAATCGCAACGCCCAGC GGCAAGAACGAGCGGCCCTACTCAACACTGGCGAACCTGAACTGCAACAAAAACTAGCCTATGCCCAGCAATTTGCAACC CAGAAAATTCTCACCGGTGAAACCATCACCTATGGCACCGACCAAGACCTCCTGGATCAACAACTGCAAGGGCGTGATGA CCTCGCCAAAGATTGGGAACGACGCCTAGAAGAAGGTCAATAA
Upstream 100 bases:
>100_bases ATAATCCCGTTCCCAGCATTTCTCTGTCCCCCAGAATTTCAACCCAATTCTATACTGGTAACAGAAGCCCCCCAGATTAT TTCTAACGATCCAAAGAGCC
Downstream 100 bases:
>100_bases CGCTTGTTTAGTCCACGCGAATTGGAATGTAAGCTCGGTTATTAGAACCACTGACCTCAGAGATGGTGTTGTTCTCATCC ACAATGATCCCAAGCCAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 440; Mature: 439
Protein sequence:
>440_residues MTFSPQLMRAVETLQYRATVGEVATQAGLELNVAQNGLYNLAADAGGHLQVAETGDVVFEFPKNFRTILRNKYFKIRLQE WLDKTWRVVFFLIRISFGIALILSILLMTIAILALVTAASSQDNNNSSRRRSSSFNLPWLVWWGPNPFRVFSPNYYGPRR YGSSATLKNTTSNTEKGGMNFLEAVFSFLFGDGDPNPNLEERRWQTIGQVIQNNDGAVIAEQLAPYFDELSPTEKNEESY MLPVLARFNGYPEVSPTGDLVYYFPELQVKAQERRQKSVPNYLEEHRWTFTLAPTGQKFLAIALGGVNLVLALMLGVLLQ DSALVAELGGLVGLAQALYPLLFAYAIAFLAVPLGRYFWLQRRNQTIENRNAQRQERAALLNTGEPELQQKLAYAQQFAT QKILTGETITYGTDQDLLDQQLQGRDDLAKDWERRLEEGQ
Sequences:
>Translated_440_residues MTFSPQLMRAVETLQYRATVGEVATQAGLELNVAQNGLYNLAADAGGHLQVAETGDVVFEFPKNFRTILRNKYFKIRLQE WLDKTWRVVFFLIRISFGIALILSILLMTIAILALVTAASSQDNNNSSRRRSSSFNLPWLVWWGPNPFRVFSPNYYGPRR YGSSATLKNTTSNTEKGGMNFLEAVFSFLFGDGDPNPNLEERRWQTIGQVIQNNDGAVIAEQLAPYFDELSPTEKNEESY MLPVLARFNGYPEVSPTGDLVYYFPELQVKAQERRQKSVPNYLEEHRWTFTLAPTGQKFLAIALGGVNLVLALMLGVLLQ DSALVAELGGLVGLAQALYPLLFAYAIAFLAVPLGRYFWLQRRNQTIENRNAQRQERAALLNTGEPELQQKLAYAQQFAT QKILTGETITYGTDQDLLDQQLQGRDDLAKDWERRLEEGQ >Mature_439_residues TFSPQLMRAVETLQYRATVGEVATQAGLELNVAQNGLYNLAADAGGHLQVAETGDVVFEFPKNFRTILRNKYFKIRLQEW LDKTWRVVFFLIRISFGIALILSILLMTIAILALVTAASSQDNNNSSRRRSSSFNLPWLVWWGPNPFRVFSPNYYGPRRY GSSATLKNTTSNTEKGGMNFLEAVFSFLFGDGDPNPNLEERRWQTIGQVIQNNDGAVIAEQLAPYFDELSPTEKNEESYM LPVLARFNGYPEVSPTGDLVYYFPELQVKAQERRQKSVPNYLEEHRWTFTLAPTGQKFLAIALGGVNLVLALMLGVLLQD SALVAELGGLVGLAQALYPLLFAYAIAFLAVPLGRYFWLQRRNQTIENRNAQRQERAALLNTGEPELQQKLAYAQQFATQ KILTGETITYGTDQDLLDQQLQGRDDLAKDWERRLEEGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49728; Mature: 49597
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFSPQLMRAVETLQYRATVGEVATQAGLELNVAQNGLYNLAADAGGHLQVAETGDVVFE CCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEECCCCCCCEEEECCCCEEEC FPKNFRTILRNKYFKIRLQEWLDKTWRVVFFLIRISFGIALILSILLMTIAILALVTAAS CCHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SQDNNNSSRRRSSSFNLPWLVWWGPNPFRVFSPNYYGPRRYGSSATLKNTTSNTEKGGMN CCCCCCHHHHHCCCCCCCEEEEECCCCEEEECCCCCCCHHCCCCCCCCCCCCCCCCCCHH FLEAVFSFLFGDGDPNPNLEERRWQTIGQVIQNNDGAVIAEQLAPYFDELSPTEKNEESY HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCCCCE MLPVLARFNGYPEVSPTGDLVYYFPELQVKAQERRQKSVPNYLEEHRWTFTLAPTGQKFL EHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCHHHHHHCCEEEEECCCCCEEE AIALGGVNLVLALMLGVLLQDSALVAELGGLVGLAQALYPLLFAYAIAFLAVPLGRYFWL HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRRNQTIENRNAQRQERAALLNTGEPELQQKLAYAQQFATQKILTGETITYGTDQDLLDQ HHHCCHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHH QLQGRDDLAKDWERRLEEGQ HHCCCHHHHHHHHHHHHCCC >Mature Secondary Structure TFSPQLMRAVETLQYRATVGEVATQAGLELNVAQNGLYNLAADAGGHLQVAETGDVVFE CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEECCCCCCCEEEECCCCEEEC FPKNFRTILRNKYFKIRLQEWLDKTWRVVFFLIRISFGIALILSILLMTIAILALVTAAS CCHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SQDNNNSSRRRSSSFNLPWLVWWGPNPFRVFSPNYYGPRRYGSSATLKNTTSNTEKGGMN CCCCCCHHHHHCCCCCCCEEEEECCCCEEEECCCCCCCHHCCCCCCCCCCCCCCCCCCHH FLEAVFSFLFGDGDPNPNLEERRWQTIGQVIQNNDGAVIAEQLAPYFDELSPTEKNEESY HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCCCCE MLPVLARFNGYPEVSPTGDLVYYFPELQVKAQERRQKSVPNYLEEHRWTFTLAPTGQKFL EHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCHHHHHHCCEEEEECCCCCEEE AIALGGVNLVLALMLGVLLQDSALVAELGGLVGLAQALYPLLFAYAIAFLAVPLGRYFWL HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRRNQTIENRNAQRQERAALLNTGEPELQQKLAYAQQFATQKILTGETITYGTDQDLLDQ HHHCCHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHH QLQGRDDLAKDWERRLEEGQ HHCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA